Aaes013613.1
Basic Information
- Insect
- Alsophila aescularia
- Gene Symbol
- -
- Assembly
- GCA_946251895.1
- Location
- CAMIUG010000563.1:1013674-1067364[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 2.5e-05 0.0024 19.2 2.4 1 23 396 418 396 418 0.98 2 21 0.0019 0.18 13.3 0.9 1 20 424 443 424 446 0.94 3 21 2.6e-05 0.0025 19.1 5.6 1 23 465 487 465 487 0.98 4 21 0.00012 0.012 17.0 4.1 1 23 493 515 493 515 0.99 5 21 4.6e-05 0.0044 18.3 5.3 1 23 521 543 521 543 0.97 6 21 9.1e-06 0.00088 20.5 7.9 1 23 549 571 549 571 0.97 7 21 8.8e-07 8.6e-05 23.7 2.9 1 23 577 599 577 599 0.97 8 21 0.00013 0.012 17.0 6.7 1 23 605 627 605 627 0.97 9 21 0.00012 0.012 17.0 6.5 1 23 633 655 633 655 0.97 10 21 6e-07 5.8e-05 24.3 1.9 1 23 661 683 661 683 0.98 11 21 6.1e-05 0.006 17.9 7.9 1 23 689 711 689 711 0.98 12 21 3.1e-05 0.003 18.9 6.6 1 23 717 739 717 739 0.98 13 21 3.6e-06 0.00035 21.8 5.6 1 23 745 767 745 767 0.98 14 21 1e-05 0.00099 20.4 5.0 1 23 773 795 773 795 0.96 15 21 1.3e-05 0.0013 20.0 5.2 1 23 801 823 801 823 0.98 16 21 3.8e-06 0.00037 21.7 6.0 1 23 829 851 829 851 0.98 17 21 7.3e-05 0.0071 17.7 7.9 1 23 857 879 857 879 0.97 18 21 3.4e-06 0.00033 21.9 5.8 1 23 885 907 885 907 0.98 19 21 0.00041 0.04 15.3 0.3 1 23 914 936 914 936 0.97 20 21 7.9 7.6e+02 1.9 0.6 1 10 946 955 946 956 0.93 21 21 8.8 8.6e+02 1.7 2.6 11 23 1106 1118 1106 1118 0.93
Sequence Information
- Coding Sequence
- ATGAATCCTGAACACCACAATATCAACACGGGTGGTGGTCAGCCTCCTGGGAGTTCAGAGTCTCAGGGACAGAGAGTGCAGGGTACACAGCAGCAGCAGCAGCAGGTCAACCTACCTGCAACAACATCTGCCACGGATTTGCGAGTGAACACAGCAGCTGTGAATGTGGCTTTGTCTAGCGTAGCGAAGTATTGGGTATTCACCAACTTATTCCCAGGACCGATCCCGCAAGTCTCTGTTTATGGATTGCCTACAGGAACTAGAATTGAAAATGGAAAACCAGTCCAGGATATTGGCCAACATGCGAGCATACTCAATGGAGATCCTAACATCATTCTTGGGCATCATGGAGGACAGCCACAGGTCACTGTATCTGCTGGGGCCCAGCAGATACCTGTGTCGCAAATTATTGCCACACAATCAGGGCAAACACATGAAGCACTGGTGGCTCACAGCCAGCACCAAGAGATGGTACAGCAGGCAAGCGGACAAACGCAGGTGTCAGTCGGCGCTGGGCAGGCTCACCACCAGGTACCCAATAGCCGGGTCGAATTTGTACAACACCATAACATTGATATGATCCAACTCACCGTTAGTGAAGATGGCATCGTCACCGTCGTGGAACCTGGCAGCAGTAAGATGGACAAGGAGGAGCTCCACGAGACCCTCAAACTGCCCTCCGACCACACCTTGACTGTTCACCAGCTGCAGCAAATTGTGGGACAACAACTCGGATCACAAGTGCTAGAGAACGTGGTCCGCATCGAGCAAGCGACGGGGGAACCTGCCAACATCCTCGTGACCCACAACCCCGATGGGACCACCTCTATAGAAGCGAGTGCTTCTGACCCACTAGCCATAGTTAAAGATGAGAAAGCGCAAGGGAAACTAGAAACAGCTCAGTTCACTATACCCACTGAAATTAAGGATATTAAAGGCATTGACTTGAAGAGTGTGGGAACAATGAACATGGAAGGAGCAGTCGTGAAGATATCCACCGGAGCCGACCACGACATGACCGCAATGTACAAAGTCAATGTTGAAGATCTCTCGCAGCTACTGGCGTATCATGAAGTGTTTGGAAAACTCAATTCAGATGGTCAGACACAAAATAAGAATGAATTAGAAATAGAAGTGCCAGGAACGAGCCAGGAAATGTCTGAAGCCGAAACGTCGCCCGGACACCATACTTGTGATATATGTGGAAAAGTGTTCCAGTTTCGATATCAGCTTATAGTCCACAGACGGTACCACGGCGAGAGCAAGCCCTACACCTGCCAAGTTTGCGGTTCTTCTTTTGCCAACCCTGTGGAACTGTCACGGCACGGGAAATGCCACCTTGCCGGAGATCCAGCCGAGCGACACGCCAAGAGGATGGCCCAAGACAAGCCGTACGCCTGCACCACTTGCCATAAAACTTTCTCACGTAAAGAACATCTGGACAATCACGTTCGGAGTCACACCGGAGAGACGCCGTATAGATGCGAGTTCTGCGCCAAAACCTTCACCCGTAAGGAGCACATGGTGAACCACGTGCGCAAGCACACGGGCGAGACCCCGCACCGGTGTGACATCTGCAAGAAGAGCTTCACTAGGAAAGAGCATTTTATGAACCACGTCATGTGGCATACAGGTGAAACGCCGCACCATTGCCAAATATGCGGTAAGAAGTATACTCGAAAGGACCACTTAACGAATCATATGAGATTGCACACGAATGATACGCCGTTCCGTTGCGAACTGTGCGGAAAGTCTTTTACAAGAAAGGAGCACTTCACCAATCACATATTGTGGCATACTGGTGAAACACCCCATCGTTGCGACTTCTGTTCGAAAACGTTCACACGCAAAGAGCATTTACTGAACCACGTCCGGCAGCACACGGGCGAGTCGCCGCACCGCTGCAACTTCTGCTCGAAGTCGTTCACGAGGCGCGAGCACCTCGTGAACCACGTGCGGCAGCACACGGGCGAGACACCCTTCCAGTGTGGATACTGCCCCAAGGCGTTCACGAGGAAGGACCATCTCGTGAACCACGTCCGCCAACACACCGGTGAGTCCCCGCACAAATGTTCGTTCTGCACGAAGTCGTTCACTCGCAAGGAGCACCTAACGAACCACGTGCGGCAGCACACCGGGGAGTCCCCGCATCGCTGCACGTACTGCGCCAAATCATTCACCAGGAAGGAACATCTCACCAACCATGTTAGGCAGCACACGGGTGAAACGCCACACAAGTGCACGTATTGCCCGCGCGCGTTCTCGCGCAAGGAGCACCTCAACAACCACTTGCGGCAGCACACGGGCGTGACGCCGCACGCCTGCTCCTACTGCAACAAGAGCTTCACGAGGAAGGAGCACCTCGTCAACCATGTGCGGCAACACACGGGAGAAACACCGTTCAAGTGCACGTTCTGTTCGAAGTCGTTCTCGCGCAAGGAGCACCTCACGAACCACGTGAACCTACACACGGGGGAGACGCCGCACAAGTGCCCGTTCTGCACTAAGACATTCTCGAGGAAAGAGCATCTGACCAACCATGTCAGAATTCACACCGGAGAGTCGCCTCACCGTTGCGACTTCTGCCAAAAAACGTTCACGCGCAAGGAACACCTCACGAACCACCTGAAGCAGCACACGGGGGACGCCGCGCACACCTGCAAAGTCTGCTCCAAGCCGTTCACGAGGAAGGAGCATCTGATGACTCACATGAGATCTCACAGCTGCGGCGAGCGGCCATACAGTTGCGGCGAGTGTGGGAAGTCATTCCCTCTCAAAGGCAACCTGATGTTCCACGAGCGCTCGCACCAGAAGGGTGGCGGCGGCCCGCGCCCCTTCCGCTGTGATGTCTGCTCTAAGGACTTCATGTGCAAAGGTACGACGGGTGTACTTATCGACGACCGGTTGACCGAATGGTTAGTGCAGTTCGGCTTTAGAGCAAGACACTCCTCAGCAAGTGCACCGCATCACGGAGCATATTCTCTTAATACGAAGCCACTTCCCCAAACCATGATAGCCGTCTTCCTAGACGTAGCAAAGGCTTTTGACGAGGCACGCGGGCTGATATACAAGCTGTATCAGCTCGGATTGCCGGATCGTCTTGTGTTCATAGTACAGGACTACCTCAGGAGCCGCAGCTTTCGCTATCGTGTCGAGGGCGACCGATCCATCCCACGCCCCATCAGAGCCGGAGTCAGGCGCCCTAGAGACATCTTGGCCGATCCGGACGATGAAATCGCTGCCGCAGAGCAGGCAGCTATGGCCTCGTCCAATCCTTCCTCACCATCTGATAACACAAGACACAGACACCGACCTCGCCGGCGAGGGCACCTGATCTCGCACCGGCGCACGCACGCGGACGCGGGCGCGGCGCCGGCCGCCGAGCCCGCAGCCGACGCCGAGGAGGACTGCACCGCCAAGTGTGTCAAGGTGGAGATGGACCCGCTCGCGCTTGAAAGCAAACCCAAAGTGGAGGAGATACGGCCAGTAGAAAGCATCATAGTTCCACAGACGTCGCCAAACACATCTGCTGTCATGCAGATCACCAATCAACAAATCCGCGCTGCCGCCACACCGAGCGCCCCCGGCATCACGTCTGCGTCGGCGACGTTCACGCACACGGTCGCGGCACAGCACCACACCGGCGCCGCCATCGCGCACCACCCGGTCAGCGTCACCTACTAG
- Protein Sequence
- MNPEHHNINTGGGQPPGSSESQGQRVQGTQQQQQQVNLPATTSATDLRVNTAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKPVQDIGQHASILNGDPNIILGHHGGQPQVTVSAGAQQIPVSQIIATQSGQTHEALVAHSQHQEMVQQASGQTQVSVGAGQAHHQVPNSRVEFVQHHNIDMIQLTVSEDGIVTVVEPGSSKMDKEELHETLKLPSDHTLTVHQLQQIVGQQLGSQVLENVVRIEQATGEPANILVTHNPDGTTSIEASASDPLAIVKDEKAQGKLETAQFTIPTEIKDIKGIDLKSVGTMNMEGAVVKISTGADHDMTAMYKVNVEDLSQLLAYHEVFGKLNSDGQTQNKNELEIEVPGTSQEMSEAETSPGHHTCDICGKVFQFRYQLIVHRRYHGESKPYTCQVCGSSFANPVELSRHGKCHLAGDPAERHAKRMAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKDHLTNHMRLHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFSRKEHLNNHLRQHTGVTPHACSYCNKSFTRKEHLVNHVRQHTGETPFKCTFCSKSFSRKEHLTNHVNLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHLKQHTGDAAHTCKVCSKPFTRKEHLMTHMRSHSCGERPYSCGECGKSFPLKGNLMFHERSHQKGGGGPRPFRCDVCSKDFMCKGTTGVLIDDRLTEWLVQFGFRARHSSASAPHHGAYSLNTKPLPQTMIAVFLDVAKAFDEARGLIYKLYQLGLPDRLVFIVQDYLRSRSFRYRVEGDRSIPRPIRAGVRRPRDILADPDDEIAAAEQAAMASSNPSSPSDNTRHRHRPRRRGHLISHRRTHADAGAAPAAEPAADAEEDCTAKCVKVEMDPLALESKPKVEEIRPVESIIVPQTSPNTSAVMQITNQQIRAAATPSAPGITSASATFTHTVAAQHHTGAAIAHHPVSVTY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -