Basic Information

Insect: Alsophila aescularia
Gene Symbol: -
Assembly: GCA_946251895.1
Location: CAMIUG010000819.1:16536-44988[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.7 4.9e+02 1.5 0.0 11 30 207 226 206 240 0.83

2 3 9.7e-09 6.8e-06 26.7 0.0 1 38 300 338 300 344 0.91

3 3 2e-08 1.4e-05 25.6 0.0 1 34 431 464 431 473 0.92

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.7	4.9e+02	1.5	11	30	207	226	206	240	0.83
2	3	9.7e-09	6.8e-06	26.7	1	38	300	338	300	344	0.91
3	3	2e-08	1.4e-05	25.6	1	34	431	464	431	473	0.92

Sequence Information

Coding Sequence: ATGGCGCGTCCAAAAGTTGAATTAAAGACTTATTTTGGGCAGTGCAAATGTTGTCTCAATTATGCGTACTTGAAAAATATGTGGGAACAGCATATGAGCGAAGGCGAAGGAGTCATTTACGGAAAGATGCTTGTCGACTGTTTTTGCTTATCTTGGATTATTCAAGGAGAAGTAGAAGATGACAAGATCTGCGACGGTTGCATATCGCGGCTGCGAGAAGCATTCCGTTTTAAGAGGCAGGTGCTTCAGTCTCGGGGTAAATTAGAGAAAGCAAACAAAGTCGCACCAGTCAACACTGAAGTTGAGGTTGAGAACATAATCGTGAATCCTGATATCGTAGCTGATGACGAGAAAGATTATGAGGATGTGGAGTTTTTAGAGGAGGATTCATCGGACGATGGAGACAAGCAGAATATCCACCAAGTTAAAGCAGCAAATGTGAAGGAGGAGATTTCAGGATACGACAACAACGATGACAATGACATGGACAATGTTGACAAAGAAGATGATGATCCAGATCCACAACCTGAAACCAGAAAGCTGGAACGGCCCCAAGCCTTAACGAGAAGTTTACGGAATAAGAAGAAGTACACAGAAGAGGAGTTAAAAATGGACTCAGCAGTGAAATCTAAAGAACTGAATATAAAGCAAGCGGCTGGGAAGTTCAATTTTCCAAGGAAGATGTCTTGGAAAATTAAAAATATACATGAAAGCAAAGAAACGAATGCACACGTGAAGGAGATGTCAGAACACGACGACAACGCTTCGGATGACAATGACACGGACTATGTTGACAATGAAGATGATGATCCAGATTCGCAACCTGACACCAAAAAGCGGAAACGACCCCAAGCTTTAACGAAGCGTTTACGGAACAAGAACATTTACAGACAGTACACAGAAGAGGAGTTAAACAAGGCCCTAGCAGCAGTGAAGACTAAAGAACTGAATATAAAGCAAGCGGCTGAGAAGTACAATGTTCCAAGGAAGACGGTGTCTTGGAAAATTAAAAATATAAATGAAAACAGAGAAACGAATGCAGCACAAGTGAAAGAGATGTCGGGATACGACGACAACGACTCGGATGATAATGACAACGTTGACAAAGCAGATGATGTACCAGCACACGTGAAGGAGATGTTGGGACACGACAACAACGTCTCGGATGACAATGACACGGACTTTGTTGACAAAGAAGATGATGATCCAGATTCACAACCTGACACAAAAAAGCGGAAACGGCCCAAAGCCTTACCGATGAGTTTACGGAATAAGAGGTACAGACAGTACACAGAAGAGGAGTTAAAATTGGCCTTAGAAGCTGTGAAGTTGGAAGTGCTGAGTGTTACGGAAGCGGCTGAGAAGTACAATGTTCCAAGGAAGACGTTGGCTTTGAAAATTAGACATATAAATGAAAACAGAGAAGCGATTGATGAAGCGGAAGACTCAGCCAATAAGACATCACCAGAAGATGAAGTAGACTATCAAAAAGAACTAATCCTCAATAAGCACAAAGAGAATGTACAATCAATACTGGTAGCTTCCAATGCCACGCCCATCAAAGGATACTGGGGAGCTGGTTACGCATGCTACTTCTGCCCTCAGCAGTTCACCATACCTTCAGATCTAAAACAACACACGTTTTCCCACGAAAACCTGCTCACAAGTTTCAAAGTGAGATCCGAGCATATAGTCAAGTTGGACGTAACCGCGCTGAAATGCAACATATGTAATGAGGGGATCCAATCGCTGGAAGGCTTGATGGTGCATTTAAAAGAGATACACCAAATGCCTATGCATTTAGACATACCCAATCATATAGTGTCGTTCAAATTTGAAAATGATGTGCTGAAATGTGTCAAATGTCCTAAGCAATTCGATTCGTTTATACATCTATCTGAGCATATGAATAACGTGCACTACAGACACTATGAATATAATCCGCAGCGCAAGAAAATAAGCGAGTTCATTAGAGGTATCCAAACTATACTGACACACACCAACGCAACTCCTTTTAAGAACTATGGAAATAAGTATTACTGCCTGTTTTGCCCTGTAGATACTCCTCACATTGAAGATCCCAAAGAACTACGCATACACACGCATTCCAAGCACACAGACAAAGTGAAAAGAATAGAATTCTTGATGCGACCAAACTACATCAACGAAATGATTCGATTTGACGTTGAAAATCTTACCTGCAAATGCGATACCAAAGCAACATGGCATGAAATGCTCGATCACCTTCAAACAAAGCATGATGTGAACATTGAAGAATTAAGAAAAAGAGTCGTTCCGTACAGACTGACTACAAGCGAAATGACTTGCGCGTTCTGCGATTATTCATCTAGCTTCACTAACATAGACACGCATATGAACACACATTACAAAAACCATATATGCGGAAACTGTGGGGATACCTTCATCACTGCAGCACGTTTGCAACGCCACGTAAAAGTCCATACAATCGGAATATATCCATGCAACAGTTGTGACAAGATGTTTTCCCGAGAATTGTACAGAAAAAAGCATATTGATGTCGTTCACATGAAGAAGTTAATGTACGGATGTATCCATTGCGATGAACGATTCTCATCCGACAAATTGAGATTCGTTCACATGGAAAGTGAACATAAAGATAAGTTGGAGATCAAATCTAGGACCTGCAAAGAGTGTGACAAGACTTTTCCTTGGGGAATGGAATATGCGCAACATATGAGGAGATTCCATGGCCTCGGAGCACACACTTGCGATGAATGTGGAAAGGAGTTTAGAGAAAGGAAGCTTTTAGAAAACCACAAGGTAAAGCATACAGGTGTTAAGAAGTACGAGTGCGACGTGTGTCAAAAGCCCTACTTTTCGAAAACGGCTGTACTTATGCACAAGAAGAACAAGCATAGCAAGCCCGAGCATAGCGAGTAA
Protein Sequence: MARPKVELKTYFGQCKCCLNYAYLKNMWEQHMSEGEGVIYGKMLVDCFCLSWIIQGEVEDDKICDGCISRLREAFRFKRQVLQSRGKLEKANKVAPVNTEVEVENIIVNPDIVADDEKDYEDVEFLEEDSSDDGDKQNIHQVKAANVKEEISGYDNNDDNDMDNVDKEDDDPDPQPETRKLERPQALTRSLRNKKKYTEEELKMDSAVKSKELNIKQAAGKFNFPRKMSWKIKNIHESKETNAHVKEMSEHDDNASDDNDTDYVDNEDDDPDSQPDTKKRKRPQALTKRLRNKNIYRQYTEEELNKALAAVKTKELNIKQAAEKYNVPRKTVSWKIKNINENRETNAAQVKEMSGYDDNDSDDNDNVDKADDVPAHVKEMLGHDNNVSDDNDTDFVDKEDDDPDSQPDTKKRKRPKALPMSLRNKRYRQYTEEELKLALEAVKLEVLSVTEAAEKYNVPRKTLALKIRHINENREAIDEAEDSANKTSPEDEVDYQKELILNKHKENVQSILVASNATPIKGYWGAGYACYFCPQQFTIPSDLKQHTFSHENLLTSFKVRSEHIVKLDVTALKCNICNEGIQSLEGLMVHLKEIHQMPMHLDIPNHIVSFKFENDVLKCVKCPKQFDSFIHLSEHMNNVHYRHYEYNPQRKKISEFIRGIQTILTHTNATPFKNYGNKYYCLFCPVDTPHIEDPKELRIHTHSKHTDKVKRIEFLMRPNYINEMIRFDVENLTCKCDTKATWHEMLDHLQTKHDVNIEELRKRVVPYRLTTSEMTCAFCDYSSSFTNIDTHMNTHYKNHICGNCGDTFITAARLQRHVKVHTIGIYPCNSCDKMFSRELYRKKHIDVVHMKKLMYGCIHCDERFSSDKLRFVHMESEHKDKLEIKSRTCKECDKTFPWGMEYAQHMRRFHGLGAHTCDECGKEFRERKLLENHKVKHTGVKKYECDVCQKPYFSKTAVLMHKKNKHSKPEHSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00056104;
90% Identity: iTF_00056104;
80% Identity: iTF_00056104;