Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_946251895.1
Location
CAMIUG010002328.1:8102-24166[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-13 8.1e-11 42.4 0.0 1 37 162 199 162 205 0.92
2 2 2.1e-18 1.5e-15 57.6 0.0 1 43 365 408 365 410 0.95

Sequence Information

Coding Sequence
ATGCTTGAAATTCCTGGCTCCCACAACTCAGAGAATCGACTCGCGGAAAAGCTCCGCGGTGAGGTGGCCAACATCGCCAGGCCCATTAAATCAGCTGATCTACGGATCACGGGCCTGGACGTTGCGGTGACGAAAGAGAAGCTGGCGAAGGCAGTCGTTGAGGCGGGAGGCTGCGAAGTGCTGCTAGTTAGGACCCGTGAAATCAGCCGTGGTTTCAACGGTACGGGCTCCATCCTGGTATCCTGCCCAGTTTTGGCAGCCCAAGTGCTGTCGAAGAAGGGCAGGCTACTGGTGGGGTGGAGGTCGGTGCCAGAAGACAAGGCCGCGCCGGCGTCCCCCAGCCTGACGGAACAGCCCCTGGACCTGAGTGCCAAGTCTACCTCCAGCGCCAGTGGCACACCTCCTCCGGAAGCTAAGACCTTGGACCATAGATTGAAACGCCTGCTAGACGGGGCAGGCAACAGTGCGAGCAAGCGGAACTACACCGAGGATGAGCTCCAATCAGCGCTCAGAGACATCCGGACCGGCACGCTCGGCACGCGCCGGGCTGCCGTGCTGTACGGCATCCCGCGCTCCACCCTCCGGAACAAAGTCAGCAAGTTCGGCCACATGCACGACGCGCACGAGACGGACCCGGACAGCGACCCCGAAGGAACAGACTCCCCACCTTCCGTCATTCTCAAAATACCAACATTCCCCCCACCCGACGACAAAAGCTCCTCCCCTGCTACGTCAGTCACGACACCCATCACGCCGATGCTCCCCAACCCTCAGTTAAATCCACCTTCACAGCTTCTCCTACCGCACTCGGTCTTCGCTGACCCTCCCTCTTCTCAACACCTGTTCTCGCTCAATGACGTCATAGCGAAAAGCATCAGTCAAAAGTTCCAGCAGCCACCGGACAGGCTGCAACACGCGGATTTGTCCTTCATGAGAGCGCCGGAAAGACACGTCTCGGTTATCAAAACGCCTCCCGACCAGAGGAACCAGTACCAGGGACCGAGCAATTCCAGAGGGCAGCCGAGTAACAACGGCCAGCCGGCGGCTGGGGGGAAAGGGACGAGACCTAAACGAGGGAAGTACCGCAACTATGACAGGGACAGTCTGGTGGAAGCAGTCAAAGCCGTTCAGAGAGGAGAGATGTCGGTGCATCGAGCGGGGTCTTACTACGGAGTGCCCCATTCCACTTTGGAGTATAAAGTCAAAGAGCGGCATTTGATGAGGCCGAGGAAACGCGAGCCCAAGCCGCAGCCGGACGTAAAGCCTCAGCCTCCAAAGCCGCCGCCACCCAAGCCCGCGAAGCCATTCTCGAACGGCCTCAACGGGCCGGAGACGCCGGGCTATCCCCCCGGGTACTTCTGGCCGGGCGCGAGTTTCTCTCCGCACCCTACTCCGGATCTGTACGCGTCTCACATGATGCGGCGGCTTCGTGAGGAGGTGCCCCCGCCGGCGAACGGGTCCTTCCTGGAGGGTATTATACGGTCGAGCCTAGAGCGGCCGGGTGCGGCGTTGCTACAGAGGCTGAACGAGCCCCGGCAGCCGATGGCGGAGTCGCCGAGTTTGCTGCGGCGGCTGGCGGGAGAGCCGCCGGAGGAGCCGCCGGCGCGGCGGCCGCGGATCGGCAGCACGGACCGGCAGCTCGCGGCGGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCAGACAAGCTGCGGCCGCGGAACGGCACGCCGACGCCGCCCGCCGCGGCCTCGCTATCCCCGCCGCCCGCGCCCCCTGCGCCCCCCGACCGCGCCTAG
Protein Sequence
MLEIPGSHNSENRLAEKLRGEVANIARPIKSADLRITGLDVAVTKEKLAKAVVEAGGCEVLLVRTREISRGFNGTGSILVSCPVLAAQVLSKKGRLLVGWRSVPEDKAAPASPSLTEQPLDLSAKSTSSASGTPPPEAKTLDHRLKRLLDGAGNSASKRNYTEDELQSALRDIRTGTLGTRRAAVLYGIPRSTLRNKVSKFGHMHDAHETDPDSDPEGTDSPPSVILKIPTFPPPDDKSSSPATSVTTPITPMLPNPQLNPPSQLLLPHSVFADPPSSQHLFSLNDVIAKSISQKFQQPPDRLQHADLSFMRAPERHVSVIKTPPDQRNQYQGPSNSRGQPSNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDVKPQPPKPPPPKPAKPFSNGLNGPETPGYPPGYFWPGASFSPHPTPDLYASHMMRRLREEVPPPANGSFLEGIIRSSLERPGAALLQRLNEPRQPMAESPSLLRRLAGEPPEEPPARRPRIGSTDRQLAAEMREAVQRLRADKLRPRNGTPTPPAAASLSPPPAPPAPPDRA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00818280;
90% Identity
iTF_00818280;
80% Identity
-