Amod099461.1
Basic Information
- Insect
- Allygus modestus
- Gene Symbol
- stc
- Assembly
- GCA_963675035.1
- Location
- OY776116.1:60090627-60136292[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 1.9 1.1e+05 -4.0 1.6 15 19 212 216 211 216 0.81 2 16 0.065 3.9e+03 0.6 0.4 4 10 245 251 244 251 0.95 3 16 2e-07 0.012 18.3 13.5 4 18 266 280 264 281 0.94 4 16 8.8e-10 5.3e-05 25.8 16.2 1 19 317 335 317 335 0.98 5 16 3e-09 0.00018 24.1 16.0 1 18 375 392 375 393 0.98 6 16 2 1.2e+05 -5.2 2.1 9 13 401 405 401 406 0.73 7 16 9.5e-05 5.7 9.7 13.9 4 18 442 456 435 457 0.86 8 16 1.1 6.3e+04 -3.2 2.2 5 10 486 491 486 491 0.93 9 16 0.00058 34 7.2 6.1 1 11 497 507 497 509 0.96 10 16 0.97 5.8e+04 -3.1 0.8 4 10 512 518 511 519 0.65 11 16 3.6e-09 0.00021 23.8 15.9 1 18 524 541 524 542 0.97 12 16 2 1.2e+05 -5.1 3.4 14 19 570 576 570 576 0.58 13 16 2 1.2e+05 -9.2 12.3 9 18 588 598 578 599 0.72 14 16 1.4e-06 0.086 15.5 16.8 1 18 635 653 635 657 0.91 15 16 1.2e-06 0.069 15.8 16.3 1 19 664 683 664 683 0.97 16 16 0.041 2.5e+03 1.3 1.9 12 19 841 848 841 848 0.92
Sequence Information
- Coding Sequence
- ATGCCTCCTCTTCTGCTTCAGTTCCATCTTCTGAAATCCTTGCTTCCCCTTAGTCGCGGGGAAGGAAACTACTACTACCAACCAGGGGCTGAGAGTGTTCAGGCTCCTCTGTACAGCAATGTTGAAATCAGTAGCGAGATATTGGCAAGAGCTGCTAACTCCCAGCTGACACCTACTGCTGGGGAGTTCATCCCGAGCACCGTGTACCAGCCTTCCAGTAGTTCACAACAAGTCGTCGCCAGCAACTCCAGTGAATCCTCCAGATGGCGTGCTCGTGGCTCAGTTGACAACAAGACATATTACAATGGAGATTCCAAGGTTTTCTCTCGATCTACTAAATCGCAAGATCGCCACCAGCAGCGCTACTCGCCACCGGGCCGAGGCACTGCTGGGGCTGGACCATCCCCTCGCAGGGAACGGAACACTGCGGGTTCAAAAGGAGTGGACGAGGCAGCCTCGCAGCGAGAGCGGCTGACGGACCAGCTGAACCGTGGCGTGCTGGAGTGCCTGGTGTGTTGCGATGTGGTCCGTCAGCAGGACCACACCTGGTCCTGCAACAACTGCTACCACGTCTTGCATCTGCGCTGCATCATCAAGTGGGCAAACACATCTAAAGCAGATAACGGGTGGAGGTGCCCGGCGTGTCAGAACGTGACGGTGGCAATGCCGAAGGACTATTCGTGTTTCTGCGGCAAGCTGGTGAACCCGGACTGGAACCGCTCGGACACGGCCCACTCCTGCGGCGAGGTGTGCAACCGCCCCAAGGTGTTGGCTAGTCAGTACTACAGCTGTGTGCATCGCTGCACTCTGCTGTGCCACCCTGGACCTTGCCCTCCGTGTGTGGCGCTTGTTACCAGAAAGTGTGGGTGTGGGGCCAGCAGCCAGTCTGTGCAGTGTGGCCAGACACAGCCGCTAGTGTGTGGCTCAGTGTGTGGGAAGGCGTTGTCGTGTGGCCAACACACTTGCACTCAAACCTGCCACGTGGGCGAATGTCAACCCTGTCAAGTTGTCATCAAACAAGAGTGCTTCTGCGGCAAGGAGGGCCGCGAGGTGGTGTGTGACGGCAGCCAGAGGGAGGGGGAGCAGTTCTCGTGTGGAGCACCGTGTGGGCAGCAGCTGTCGTGCGGCCACCACACTTGTGAGCAGACATGTCATGCAGGGCCGTGTGACACGTGCGTGCGCGATCCCGCACGTGTGATGACCTGCCACTGCGGCAAGACTCTCCTGGGCGATGACCAGCTACGGACATCCTGTCTCGATCCCATCCCCACGTGCGGTCAGATGTGTGGGAGACTGCTTACCTGTGGGCAGCCTAGCAACCCCCACAGCTGCAAGGCGCAGTGCCACGGAGGGCTGTGTCCGCCGTGTGACCAGACCACCCTCGTGAGATGCCGCTGCGGCTACATGGACCGGGAGCTGCCCTGCACGGAGCTCACCACCAAGGCTGACGATGCTCGCTGTCAGAAGAAATGTACCAAGAAGCGCACGTGTGGGAAGCACAAGTGTAACCAATTCTGCTGCATAGATGTGGACCATGTGTGTCCACTTCCCTGCAACCACATGCTGAGCTGCGGCCAGCACAGATGCGACCAGTTGTGCCACCGCGGCCACTGCCAGCCCTGCCTGCAGTCCAGTTTCACGGAGCTTTACTGTGAGTGCGGGGCCAGCGTGCTGCACCCGCCCATCCCCTGCGGTACCAAGCCCCCGCCATGCGACCGGCCATGCCCCCGCCGGCACGAGTGTGACCACGAGGTGCTGCACTTGTGCCACAGCTACCCGGAGTGTCCCCCCTGCGGGGTACTCACGTCCAAGCACTGCCACGGCAAGCACGAGCTGCGGAAAGCAGTGCCATGTCACATGAAGGAGTTCTCATGCGGGCGGCCATGTGGTCGCGCACTGCCGTGCGGACGACACAAGTGTATCCAGCCGTGCCACGGGGGTGACTGTGCGACCAGCTGCCGCCAGCCGTGTGCCAAGCCGAGGGAACTGTGCGGCCACCCCTGCAACCAGCCCTGTCATGAGGGGGACTGCCCCGATACACCCTGCAGGGAGAATGTTGTGGTGACTTGCGAGTGTGGCTATCGCAGCATGTCGCGGCCGTGCTACGAGAACAACAGTGAGTACCAGCGAATCGCCACATCACTGCTGGCGTCCAAGATGGCCGACGTGCAGCTGGGCCGCTCCGTCAACCTGGCCGACATGCAAGGTTCACGCAGGATCACCATCAAGACGCTGGAGTGTTCGGAGGAGTGTCGCGTGGTGGAGCGTAACCGCCGGCTCGCCATCGGGCTGCAGATTCGCAACCCCGACCTGAGCGCCAAGCTTACCCCTCGCTACACAGACTTCATGCGAGGCTGGGCCAAGAAGGACCCTCGCTTCTGCCAACATGTCCACGACAAGCTCACCGAACTCGTCAAACTGGCAAAGGAGAGTCTACTGTCTAACGAACGAGAGGCCCAGATCAGAGGTTATGACGACTTGACTACATTTGGAGGTGAGGTTGCAGAGCCCCTTAGTGATAGTGGTGAATGTCAAAATTGTCCCTGGAGTAATTGTGGAATGGTGCAGTGGCTACGAGTCTCGCAAACTCCCCGCCCATGTGTACAACCCACATCGACACTAGCAGGCACCAATGTGAAGTCTACATTGGAGTCAAAACAGAAGAGTCGTAGCTATTCATTTGAAACGATGAATCGAGAGAAGCGGCAGTTTGTCCATGAGTACTGCACTCACTTCGGTTGTGAATCTGTGGCCTACGATGCAGAGCCTAAACGCAACGTGGTCGCCACTGCTCAGAGGGATAAGGCCTGGCTGCCCAGCTACAGTCTGTTGGAAGTAATGCAGAGAGAGATGGGTCTGCGCAAGGTACCTCTTCCAAATCTCAACTCTTCCAGTCAAAAAACTCCTTCTCAAAGCAATGTGCTGCCTGTTAGGGTGGCCCTGAACCAGCCAGCCAAACCTGCGTTGCCAGAAGCTCCTCAGATCGACTATTTTGATTTCAACGGCTAA
- Protein Sequence
- MPPLLLQFHLLKSLLPLSRGEGNYYYQPGAESVQAPLYSNVEISSEILARAANSQLTPTAGEFIPSTVYQPSSSSQQVVASNSSESSRWRARGSVDNKTYYNGDSKVFSRSTKSQDRHQQRYSPPGRGTAGAGPSPRRERNTAGSKGVDEAASQRERLTDQLNRGVLECLVCCDVVRQQDHTWSCNNCYHVLHLRCIIKWANTSKADNGWRCPACQNVTVAMPKDYSCFCGKLVNPDWNRSDTAHSCGEVCNRPKVLASQYYSCVHRCTLLCHPGPCPPCVALVTRKCGCGASSQSVQCGQTQPLVCGSVCGKALSCGQHTCTQTCHVGECQPCQVVIKQECFCGKEGREVVCDGSQREGEQFSCGAPCGQQLSCGHHTCEQTCHAGPCDTCVRDPARVMTCHCGKTLLGDDQLRTSCLDPIPTCGQMCGRLLTCGQPSNPHSCKAQCHGGLCPPCDQTTLVRCRCGYMDRELPCTELTTKADDARCQKKCTKKRTCGKHKCNQFCCIDVDHVCPLPCNHMLSCGQHRCDQLCHRGHCQPCLQSSFTELYCECGASVLHPPIPCGTKPPPCDRPCPRRHECDHEVLHLCHSYPECPPCGVLTSKHCHGKHELRKAVPCHMKEFSCGRPCGRALPCGRHKCIQPCHGGDCATSCRQPCAKPRELCGHPCNQPCHEGDCPDTPCRENVVVTCECGYRSMSRPCYENNSEYQRIATSLLASKMADVQLGRSVNLADMQGSRRITIKTLECSEECRVVERNRRLAIGLQIRNPDLSAKLTPRYTDFMRGWAKKDPRFCQHVHDKLTELVKLAKESLLSNEREAQIRGYDDLTTFGGEVAEPLSDSGECQNCPWSNCGMVQWLRVSQTPRPCVQPTSTLAGTNVKSTLESKQKSRSYSFETMNREKRQFVHEYCTHFGCESVAYDAEPKRNVVATAQRDKAWLPSYSLLEVMQREMGLRKVPLPNLNSSSQKTPSQSNVLPVRVALNQPAKPALPEAPQIDYFDFNG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -