Basic Information

Insect: Allygus modestus
Gene Symbol: ZNF341
Assembly: GCA_963675035.1
Location: OY776112.1:28730090-28745784[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.4e-05 0.00083 22.3 3.2 2 23 143 164 142 164 0.97

2 9 7.3e-08 2.6e-06 30.2 1.9 1 23 170 192 170 192 0.99

3 9 0.00022 0.0076 19.3 1.3 1 23 225 247 225 247 0.97

4 9 1 36 7.7 0.7 5 23 259 277 253 277 0.90

5 9 0.033 1.2 12.4 4.0 1 23 285 307 285 307 0.99

6 9 0.065 2.3 11.5 0.1 2 21 319 338 318 342 0.91

7 9 0.075 2.6 11.3 5.7 1 23 344 366 344 366 0.98

8 9 7.1e-06 0.00025 23.9 0.5 1 23 372 394 372 394 0.97

9 9 1.9e-05 0.00065 22.6 0.6 1 23 400 422 400 422 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.4e-05	0.00083	22.3	3.2	2	23	143	164	142	164	0.97
2	9	7.3e-08	2.6e-06	30.2	1.9	1	23	170	192	170	192	0.99
3	9	0.00022	0.0076	19.3	1.3	1	23	225	247	225	247	0.97
4	9	1	36	7.7	0.7	5	23	259	277	253	277	0.90
5	9	0.033	1.2	12.4	4.0	1	23	285	307	285	307	0.99
6	9	0.065	2.3	11.5	0.1	2	21	319	338	318	342	0.91
7	9	0.075	2.6	11.3	5.7	1	23	344	366	344	366	0.98
8	9	7.1e-06	0.00025	23.9	0.5	1	23	372	394	372	394	0.97
9	9	1.9e-05	0.00065	22.6	0.6	1	23	400	422	400	422	0.99

Sequence Information

Coding Sequence: ATGGCTCACAAGAAAACCCACCAACTGAATGGCTTTCCCAGTTCCCAGAAGCTGCTAACGGAGAGTGCGGCCGCTACTGAGGAGCCGGAGCTGCAACTGCAGCCGATCATCCTCAGCGAGTCAGACATCTTGTCATTCAGCATCGGCCAGGCTGGGCTTAGCCTCTCGTCCGCAGAGCAGGGTCTGAATGGGTTTGAAGACAACGAGACCCTGCTGATGCCTGAAGCAGAAGATTCTGAGCTGAATGAATCCTCGGAGGCAACACCTAACCTGCAGTTCAGATCTGCCCAGATTATCCTCACTACCCAGATAAGCAATGAGGAGCCTGTTGAGATGATTCTGCCAAACGCTGGCACTGGGGCAGCTCCCTCCTTCGGCCTCGGCAGTCACATCCTCACGCTGAACCACTCTGCGATGCTGCAGCTGACGTGCCCGTACTGCCACAAAGAGTTCACCAAGAACTTTGACCTACAGCAGCACCTGCGCAgccatactggagaacggccgtTTCAGTGCGTTGTCTGCGGCCGGTCCTTCACACAGAAATCCAATGTCAAGAAACACATGCGCACGCACAAGGTGTGGCCTCAGAAGATAAGAACATTGCCTGAAAAGCCGTTGGAGAAAATGACAACCGAATCTTCTCAAGAAGAAGTGGTGGTCAATGACAAGTTTGCGTGTCAGTATTGCCCAGCCGTGTTTAGCAGCTTCACACAGCTCAAAACTCATCGTAAAACACACGCTGATAATAagATATTCCGCTGCATCCAGAGCAAGTGCGGGCAGATGTTCGAGTCGCTGCAGCAGTTCTTGCAGCACACGGCGTCGCACCAGACGCAGCGCGACGTGCAGTACCGGTGCTGCGTGTGCCGGCAGGTGTTCCACAACCTGGACGACCTCGGAACACACCAGAACACGCACCCATTCTCGGTCAGGAACAGGCAAGGCTCCGTAACGTGTAAGGTATGCAAGGCCAAGTTTGCATCAGTAGAAGCTCTGGAGAGGCATCAGACTGAAGACCCCCACATGTACACTTGTCCTGAATGTCACAAGATTTACGTGTGCGAGAGACATCTCCGCAGGCATCTTGTGACCCACTCCTCCATCCCCTCCCACCCCTGCCCCGACTGCGGCAAGAACTTCAAGACTGCTCAGAACCTCAGTATCCACCGGCTGATCCACGCCGGGGAGAGAGCCTACACTTGCAAGCTGTGCCCGGCTACGTTCGTGCGGCAGGACCGGCTCATGAGGCACATGATGATGCACGACCCCACACGAAGCTCTTGCTGTGTAGAAAACACCAGTTGTTGTGGTGTGCTCCGCCTTCCACGTCCAGCCGATGACTGCCGGTGCGGACCCGCTCCCTCTCCCTCGTTCGAGGCGAGGCAAGAGAGAGCGTTGGAGTACCGCGCGGCAGCGCCGACCGGACGAGGGAGCCGGCAGCAAAATACACACCACGTGGGGGTTACCAGAAGGGCTTCCGACCACGGGGCTACAGGGCTGAACGTCCCTGACCGGAAGGGTCAAAACGAGGGATATCCTAAGGCTAGGAACAAACTTAACCTAGTTACACTGCCCGTAGGGCCACAGGGCAGAAAGTCCCTGACCAGAAGGGTCATTCGTTATGCTAAAAACTAA
Protein Sequence: MAHKKTHQLNGFPSSQKLLTESAAATEEPELQLQPIILSESDILSFSIGQAGLSLSSAEQGLNGFEDNETLLMPEAEDSELNESSEATPNLQFRSAQIILTTQISNEEPVEMILPNAGTGAAPSFGLGSHILTLNHSAMLQLTCPYCHKEFTKNFDLQQHLRSHTGERPFQCVVCGRSFTQKSNVKKHMRTHKVWPQKIRTLPEKPLEKMTTESSQEEVVVNDKFACQYCPAVFSSFTQLKTHRKTHADNKIFRCIQSKCGQMFESLQQFLQHTASHQTQRDVQYRCCVCRQVFHNLDDLGTHQNTHPFSVRNRQGSVTCKVCKAKFASVEALERHQTEDPHMYTCPECHKIYVCERHLRRHLVTHSSIPSHPCPDCGKNFKTAQNLSIHRLIHAGERAYTCKLCPATFVRQDRLMRHMMMHDPTRSSCCVENTSCCGVLRLPRPADDCRCGPAPSPSFEARQERALEYRAAAPTGRGSRQQNTHHVGVTRRASDHGATGLNVPDRKGQNEGYPKARNKLNLVTLPVGPQGRKSLTRRVIRYAKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -