Basic Information

Insect: Allygus modestus
Gene Symbol: -
Assembly: GCA_963675035.1
Location: OY776111.1:420044026-420062499[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0032 0.11 15.6 6.0 1 23 97 119 97 119 0.98

2 10 0.00051 0.018 18.1 2.1 1 23 125 147 125 147 0.97

3 10 0.00016 0.0054 19.7 5.3 1 23 153 175 153 175 0.99

4 10 0.00015 0.0051 19.8 3.0 1 23 181 203 181 203 0.97

5 10 0.00047 0.016 18.2 1.5 1 23 209 231 209 231 0.96

6 10 0.019 0.65 13.2 0.1 1 23 237 259 237 259 0.97

7 10 0.061 2.1 11.6 0.1 2 21 265 284 265 285 0.95

8 10 0.0024 0.084 16.0 0.0 2 23 377 398 376 398 0.97

9 10 0.00091 0.032 17.3 4.5 1 23 430 452 430 452 0.97

10 10 4.4e-05 0.0015 21.4 1.9 1 23 462 484 462 484 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0032	0.11	15.6	6.0	1	23	97	119	97	119	0.98
2	10	0.00051	0.018	18.1	2.1	1	23	125	147	125	147	0.97
3	10	0.00016	0.0054	19.7	5.3	1	23	153	175	153	175	0.99
4	10	0.00015	0.0051	19.8	3.0	1	23	181	203	181	203	0.97
5	10	0.00047	0.016	18.2	1.5	1	23	209	231	209	231	0.96
6	10	0.019	0.65	13.2	0.1	1	23	237	259	237	259	0.97
7	10	0.061	2.1	11.6	0.1	2	21	265	284	265	285	0.95
8	10	0.0024	0.084	16.0	0.0	2	23	377	398	376	398	0.97
9	10	0.00091	0.032	17.3	4.5	1	23	430	452	430	452	0.97
10	10	4.4e-05	0.0015	21.4	1.9	1	23	462	484	462	484	0.97

Sequence Information

Coding Sequence: ATGAACGATGAAGCTACGAGACATTTTTTAGCACCACCTTTGCCCCCGATTCAACCTTGCGATATCCAATCTGATTATTTTCAGAAGAAACTAATGACTCAAGTATCTGGCTCTAGCACTCCTGGATCATCATCAGTCACTACAAGCAGTACAAATTCCAATACAACTGGTACAACAACCACTGGTACCAACACGACTAATCCCAGCAACCAGCAGACGACAGCCAGCGTTGGTTCGGGTGTGTCGCCAGAAAACAAACTCACAATAACTCTGCCCAAGCAGCGGCCCCACACTTGTGAGGAATGCGGGAAGACCTTCCTGATGAAACACCATCTGCTCACTCACATGCGGGTACATACAGGCGAGAGGCCCTACATCTGCCCCGAGTGCGGGAAAAGTTTTGCGCTCAAGCACTGCCTCAGCACACACCTGCTGCTCCACACGGCCGACCGCCCGTACAAGTGTAATGAGTGCAACAAGAGCTTCACGCTGAAACATCATCTGGTGAGCCACGAGCGAGTGCACACGCGGGACCGGCCATTCGAGTGCACCGAGTGCGGCCAGCGGTTCCCCCAGAAGCGGCACCTCTCCACCCACATCAAGTTCCATTCGGGCGAGAGACCGTTCTCGTGTCAGGTGTGCGGGGAGTCGTTCTCCCGGGAGGAGCACCTGGTGATGCACTCGCGGTTCCACGGAGGCCTGAGCCCCTACAACTGCCCTGACTGCGGCGCCGGGTTCCTGCGCAAGTTCGAGCTGGTGAACCACGAGCGACAGCACGGCCGCAACCCCGAGAGCTGTCCCAGCTGCGGCAAGGAGTTCCTGCAGAAGCGGACGCTGCTGGTGCACATGCGCGCGTGCAACGGGAATGGACCCGTCAGTGTGGGGACGCAGCAGTCCTTCTCACCTCCGAGGTTTTCTGAAAGTGGCTCTCCCCCAAGATTCAGCGACAATTCGCCTCCGAGATTAAATGACGGAATGACACAGCGGTTCCCAAACAACAGTAATTCCCCGAGATATTATGAAAATAGCAGTAACCAGTTTAGGTTTTCCGAGGGCCAAATGAGGTTCAACAATGACAATACACCTTCGTCTTCACCCATGCCTCCAATGCAAGCTCCGAAAGACAAAGTTTGCAAggAGTGTGGAGAGACATTTGCGAGTGTCGAAGGCCTTGCCCTTCACCTGCGTTTGCACTTTGGGGATCACAGTTTCCTGGCCGACATTTGCAGTTTGGCAGCGTCGTTGAAGCAAACCGCAGTCAACGTAGCAGCCTCCCTCAAGAAGACGCACATTTGTACAGACTGCGGTCGCGGGTTCACTCAGAGACACGGACTGTTCCAGCACAGGCAACGACACGCCAACGGGAGCTGCAAGGAGAAACCTTTTGCGTGTGAAAAGTGCGGTAAGAGTTTTGCGCAAAAGAATCATCTGATGCTGCACGAGCGACAACACATGGATTTACCACCGAGAGGTTCGAAAAACAGTCAGAAAGCTGCTCAACCTCCGGCGGATAACGTCGAACAAATGGATACATCCAGTGAAACGGGACACCAGGTCGAACGGACCCGCCAGGCGGAGAGGACGTCACAAAGCTCGGACATAATAATGCAGAGTCACCCTGACCTTCAGCGGGTGGATCTGTTAAACAGGCATGGCTCCAAGTCATCCGATTGTACTTCACAAAACGATAAGGGGAATATAAGTATGATGATGCAGCCCAGTCACCCTGACCACCAACGAGACCTTTTAAACAGGCACGCTTCAGATTCATCCGACAGCACCTCTCAAAGTGAGAAAGGAAATATGAATATGATGATGCAATCGAATCATCCTGATCACCATCGAGACCTTTTAAAAAGTGAAATAATGCAAAATCACCAGGATCATCAGCGAGTGGATCTTTTAAACAGACATGCCACAAAGTCATCTGATAACACTTCCCAAAACGAGAAGGGAAACATGAGTATGATGATGCAGCCCAATCACACTGACCACCAACGAGACCTTTTAAACAGGCACGCTTCGGATTCGTCCGACAGCACCTCTCAAAGTGAGAAGGGGAATATGAATATGATGATGCAATCAAATCATCCCGATCACCATCGAGACCTTTTAAACAGGCACGCCTCCGAATCTTCGGAAAGGAGTTTGCAGATGCAACAGAGTCATGCGGACAGTCATTTGATGAATCGTCATAGTTCAGAATCTCACAGGTCGATGAACAATCCGGTGCCGTTAATACGGTTGCATAGTAACCGAGTGAGTCAGGGTGGAGGCAGTGGGATACAACAGGCGTCTGGCAATCGACCGATGATGCCTCACCATCATCACATGGGCGGGACGCAAAGTTCAGAACAAATCATGCCTTGTCTGCACCCTGTACCCAGCAAACAGTATTAG
Protein Sequence: MNDEATRHFLAPPLPPIQPCDIQSDYFQKKLMTQVSGSSTPGSSSVTTSSTNSNTTGTTTTGTNTTNPSNQQTTASVGSGVSPENKLTITLPKQRPHTCEECGKTFLMKHHLLTHMRVHTGERPYICPECGKSFALKHCLSTHLLLHTADRPYKCNECNKSFTLKHHLVSHERVHTRDRPFECTECGQRFPQKRHLSTHIKFHSGERPFSCQVCGESFSREEHLVMHSRFHGGLSPYNCPDCGAGFLRKFELVNHERQHGRNPESCPSCGKEFLQKRTLLVHMRACNGNGPVSVGTQQSFSPPRFSESGSPPRFSDNSPPRLNDGMTQRFPNNSNSPRYYENSSNQFRFSEGQMRFNNDNTPSSSPMPPMQAPKDKVCKECGETFASVEGLALHLRLHFGDHSFLADICSLAASLKQTAVNVAASLKKTHICTDCGRGFTQRHGLFQHRQRHANGSCKEKPFACEKCGKSFAQKNHLMLHERQHMDLPPRGSKNSQKAAQPPADNVEQMDTSSETGHQVERTRQAERTSQSSDIIMQSHPDLQRVDLLNRHGSKSSDCTSQNDKGNISMMMQPSHPDHQRDLLNRHASDSSDSTSQSEKGNMNMMMQSNHPDHHRDLLKSEIMQNHQDHQRVDLLNRHATKSSDNTSQNEKGNMSMMMQPNHTDHQRDLLNRHASDSSDSTSQSEKGNMNMMMQSNHPDHHRDLLNRHASESSERSLQMQQSHADSHLMNRHSSESHRSMNNPVPLIRLHSNRVSQGGGSGIQQASGNRPMMPHHHHMGGTQSSEQIMPCLHPVPSKQY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -