Basic Information

Insect: Allygus modestus
Gene Symbol: -
Assembly: GCA_963675035.1
Location: OY776112.1:8157060-8183007[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0099 0.35 14.0 0.3 1 23 301 323 301 323 0.95

2 12 0.00047 0.016 18.2 1.5 1 23 331 353 331 353 0.99

3 12 0.0058 0.2 14.8 0.5 2 23 361 382 360 382 0.97

4 12 9.4e-05 0.0033 20.4 2.9 1 23 388 410 388 410 0.98

5 12 0.00085 0.03 17.4 1.0 1 23 417 439 417 439 0.97

6 12 4.7e-05 0.0017 21.3 0.1 1 23 445 467 445 467 0.93

7 12 0.00025 0.0089 19.0 0.2 1 23 473 495 473 495 0.98

8 12 1e-05 0.00035 23.5 1.2 1 23 501 524 501 524 0.96

9 12 0.00015 0.0053 19.7 0.7 1 23 530 553 530 553 0.96

10 12 0.0011 0.039 17.0 2.0 1 23 559 581 559 581 0.99

11 12 0.0015 0.053 16.6 0.4 1 23 587 609 587 609 0.94

12 12 0.0041 0.14 15.2 0.1 1 23 615 639 615 639 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0099	0.35	14.0	0.3	1	23	301	323	301	323	0.95
2	12	0.00047	0.016	18.2	1.5	1	23	331	353	331	353	0.99
3	12	0.0058	0.2	14.8	0.5	2	23	361	382	360	382	0.97
4	12	9.4e-05	0.0033	20.4	2.9	1	23	388	410	388	410	0.98
5	12	0.00085	0.03	17.4	1.0	1	23	417	439	417	439	0.97
6	12	4.7e-05	0.0017	21.3	0.1	1	23	445	467	445	467	0.93
7	12	0.00025	0.0089	19.0	0.2	1	23	473	495	473	495	0.98
8	12	1e-05	0.00035	23.5	1.2	1	23	501	524	501	524	0.96
9	12	0.00015	0.0053	19.7	0.7	1	23	530	553	530	553	0.96
10	12	0.0011	0.039	17.0	2.0	1	23	559	581	559	581	0.99
11	12	0.0015	0.053	16.6	0.4	1	23	587	609	587	609	0.94
12	12	0.0041	0.14	15.2	0.1	1	23	615	639	615	639	0.94

Sequence Information

Coding Sequence: ATGACTGCTGACACGGATAAAACTCCTGCCAGCAAAAACACATCCTGTCTCATCTGTGATGCTAGCGTCGGTGTCTCGACCAGAAACAGCTGTCCGATCTTCCAGCAGCATGTGACAGCGTCTGACAAGCCGGTTTATAAGATCATCGGATTGGTGTTGGACCTAGAAGTCCAGGAGAACCTCGTCCACAGTGTCGTCGTCTGCAAGAAGTGCTTCAAGCTACTGAATGAAGCGGACGAGCTGCAAGAGAGACTCACTGAAATCCAGCTGGAGGTGAAGGGGAACTACCACCGCACTTTGAGGAAGTATGACAGCACATTGCCTCCTGAGGAGGAAACGGAAGATCACAAACCAGTGCTGGAAACGCCCAGGATCAAACAGGGGCCAGGAAGACCGAGATTAAAGAGAAACCCACCAGAGATGAAGACTCCTCAGCCGGGGGTATTCGGTGAGAACTCAGCCACGGAGGATGTTACCTTGCTATACAACGACCATCAGAAGGAGAACAAAAGTGGCAACAGTAACGAATTGGAACAACTGGAAGCCGAGAAAGAAGAAGACGAAGGTGATGAGGATACAGGAGACGTGGATGATGATGAAGATTACATTCCCACATTGGCAGAGCTCGGGAGTCTGTCACGGTCAGAGTCCGGGGATGTGCAGATCAAGGTGGAGGTGATGGAAGAAGATGTAACAGACAAAGTACTGGGGAAGAAAGGACTTTTGAGAAAAAAGAAGGGTTCCCCTATCAAGGGTGAAATGCCAGCATTGATACCAGCCATGGTGGTGAGCAGAGACGCAGCAGTCTACACTTGCCTGGTTTGCTCTGCAGAAGAGAAGTTTATAGCGGATGCGAAAGGCATCACCCATCACCTGAAGGAATGCCACAACCTGAGGCTCTACATTTGTGACATATGCGGTCAGGAGTTCTTCAAACGTAACGAACTTTCCACCCATCTGGACGAACATGTTGCCACCGAAGAGAGAGACTTTCAGTGTGAAGTGTGTAACAGGATATTTTCTAACTTAAGACTGTACCGAGTGCATAAGCGGATGCATTATCCTCAAGTGAAAAACTGGACCTGTGATCAGTGTGGGAAGAGATACTTATCTCGCAACATGCTAGAGGAGCACATGAACACCCACACTGGCAACCGGCCTTACATCTGTTCTCACTGTGGGAAGGACTTTGCGTCCAAGTACACGTTCAAGGCCCACGAGAAGACGCACCTAGAGCGGCCGAGGCCCTTCGCGTGTGGCAAGTGCAGCAAGACATTCCTGACCCAGGCCAACCTCCAGCAGCACGAGCGAACACACAGCCCCACGCGGAACTTTGTGTGCCAGATCTGCGGCAAAGGCTTCAGCACGTCCCGCAACCTGGAGGTGCACTCTGTGATCCACACGGGCTACAAGTCCTTCATCTGCCGCATGTGTGGCAAGGCGTTCGCGCGCAAGGCGGAGATACGCGACCACGAGCGCACGCACACGGGGGAGAAGCCGTACCAGTGCGAGTTCTGCGGCGCGACCTTCAGTCAGAGGAGCAACCTGCAGTCGCACAAGCGCGCGACCCACTACGACGACAAGCGCTACAAGTGCATGGAGTGCGGCAAGGGCTTCAAGCGGCGGCGGCTGCTGGACTACCACATGAAGGCGGCGCACACCGGCGAACGGCCGTACAAGTGCAGCGTCTGCGCCGCGACGTTCATCTATCCTGAGCACTTCAAGAAGCACCGGCGGATACACACCGGCGAGAAGCCCTTCCTGTGTGAGGTTTGTGGCAAGGCTTTCAACAGCAGAGACAACCGCAACGCTCATCGGTTTGTGCACAGTGACAAGAAACCATATGAGTGTTTGGTTTGCGGCATGGGCTTCATGAGGAAACCTCTTCTGTACAACCATATGCAGACACAGGGTCACCTGAACGACACCATAGTGGTGAACCAGCCGAGGCTGACCACGGACGAGGACAACATTGTGCTGTCGCAGAACACGGCTGAGGGCATGGAGATGGCGTTCGTCACCGACAGCGACGGCAACACAAAGCTGATGCCCGCGGACTCTGTGGAGCTTGACCCCAACAACCAGGACACCAAGATGTACATCACGGAGCTGAAGGAGCACGTGATCCTCAAGGAGCGGGAGGACGGGATGGTGGAGACCGACGAGATCGTGGAGGCCTCCGAGTACGATGAGACCGTGCAGCATCTCATCATCGACGGACAGGTTCATTTCGCCAATCCGGGGGGTATCGAGGCCCTGGAAGCCGATGGGACTGAGATTGAGTCGGTGACTGAGATAACCACGTTGGAGGATGGCACGCGACACCTGGTGGTGCCCTCGACACGTCACGGGTACTCAGAGCAGACCGCGACCATGCAGACAGAAGGCGGGACGGTTCAGCTGGTGCAGATACGCATTCCGACCGAAGGGGAAGCTCAGACCCACTGGATAAACATTCTGCAACCGCCAGACCAGTAA
Protein Sequence: MTADTDKTPASKNTSCLICDASVGVSTRNSCPIFQQHVTASDKPVYKIIGLVLDLEVQENLVHSVVVCKKCFKLLNEADELQERLTEIQLEVKGNYHRTLRKYDSTLPPEEETEDHKPVLETPRIKQGPGRPRLKRNPPEMKTPQPGVFGENSATEDVTLLYNDHQKENKSGNSNELEQLEAEKEEDEGDEDTGDVDDDEDYIPTLAELGSLSRSESGDVQIKVEVMEEDVTDKVLGKKGLLRKKKGSPIKGEMPALIPAMVVSRDAAVYTCLVCSAEEKFIADAKGITHHLKECHNLRLYICDICGQEFFKRNELSTHLDEHVATEERDFQCEVCNRIFSNLRLYRVHKRMHYPQVKNWTCDQCGKRYLSRNMLEEHMNTHTGNRPYICSHCGKDFASKYTFKAHEKTHLERPRPFACGKCSKTFLTQANLQQHERTHSPTRNFVCQICGKGFSTSRNLEVHSVIHTGYKSFICRMCGKAFARKAEIRDHERTHTGEKPYQCEFCGATFSQRSNLQSHKRATHYDDKRYKCMECGKGFKRRRLLDYHMKAAHTGERPYKCSVCAATFIYPEHFKKHRRIHTGEKPFLCEVCGKAFNSRDNRNAHRFVHSDKKPYECLVCGMGFMRKPLLYNHMQTQGHLNDTIVVNQPRLTTDEDNIVLSQNTAEGMEMAFVTDSDGNTKLMPADSVELDPNNQDTKMYITELKEHVILKEREDGMVETDEIVEASEYDETVQHLIIDGQVHFANPGGIEALEADGTEIESVTEITTLEDGTRHLVVPSTRHGYSEQTATMQTEGGTVQLVQIRIPTEGEAQTHWINILQPPDQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00727683;
90% Identity: -
80% Identity: -