Basic Information

Insect: Allygus modestus
Gene Symbol: -
Assembly: GCA_963675035.1
Location: OY776111.1:465236194-465265771[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0086 0.3 14.2 1.5 1 23 519 541 519 541 0.96

2 18 0.00039 0.014 18.4 1.1 1 23 547 570 547 570 0.96

3 18 0.0014 0.05 16.7 0.6 2 23 578 599 577 599 0.97

4 18 0.0064 0.22 14.6 3.7 1 21 605 625 605 627 0.96

5 18 0.00034 0.012 18.6 4.8 1 23 633 655 633 655 0.99

6 18 0.0018 0.062 16.4 1.7 2 23 662 683 662 683 0.96

7 18 0.0002 0.0071 19.3 3.5 1 23 689 711 689 711 0.98

8 18 4.3e-05 0.0015 21.5 2.6 1 23 717 739 717 739 0.98

9 18 0.00099 0.034 17.2 6.7 1 23 745 767 745 767 0.97

10 18 0.00013 0.0046 19.9 6.7 1 23 773 795 773 795 0.98

11 18 2.5e-05 0.00088 22.2 2.8 1 23 801 823 801 823 0.98

12 18 2.8e-05 0.00097 22.1 7.9 1 23 829 851 829 851 0.98

13 18 4.6e-05 0.0016 21.4 7.3 1 23 857 879 857 879 0.98

14 18 9.2e-05 0.0032 20.4 4.9 1 23 885 907 885 907 0.98

15 18 0.00011 0.0037 20.2 3.8 1 23 913 935 913 935 0.98

16 18 0.0021 0.071 16.2 0.4 1 23 941 963 941 963 0.97

17 18 0.12 4.3 10.6 5.4 1 23 972 994 972 994 0.98

18 18 2.1e-05 0.00075 22.4 0.7 1 23 999 1021 999 1021 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0086	0.3	14.2	1.5	1	23	519	541	519	541	0.96
2	18	0.00039	0.014	18.4	1.1	1	23	547	570	547	570	0.96
3	18	0.0014	0.05	16.7	0.6	2	23	578	599	577	599	0.97
4	18	0.0064	0.22	14.6	3.7	1	21	605	625	605	627	0.96
5	18	0.00034	0.012	18.6	4.8	1	23	633	655	633	655	0.99
6	18	0.0018	0.062	16.4	1.7	2	23	662	683	662	683	0.96
7	18	0.0002	0.0071	19.3	3.5	1	23	689	711	689	711	0.98
8	18	4.3e-05	0.0015	21.5	2.6	1	23	717	739	717	739	0.98
9	18	0.00099	0.034	17.2	6.7	1	23	745	767	745	767	0.97
10	18	0.00013	0.0046	19.9	6.7	1	23	773	795	773	795	0.98
11	18	2.5e-05	0.00088	22.2	2.8	1	23	801	823	801	823	0.98
12	18	2.8e-05	0.00097	22.1	7.9	1	23	829	851	829	851	0.98
13	18	4.6e-05	0.0016	21.4	7.3	1	23	857	879	857	879	0.98
14	18	9.2e-05	0.0032	20.4	4.9	1	23	885	907	885	907	0.98
15	18	0.00011	0.0037	20.2	3.8	1	23	913	935	913	935	0.98
16	18	0.0021	0.071	16.2	0.4	1	23	941	963	941	963	0.97
17	18	0.12	4.3	10.6	5.4	1	23	972	994	972	994	0.98
18	18	2.1e-05	0.00075	22.4	0.7	1	23	999	1021	999	1021	0.97

Sequence Information

Coding Sequence: ATGAGAGGGAATACCACAGCAACAGCGATATTTCCGCTAGCTCAGCAGTTTTGGGAGGAATGCATGTACAATCAGCTGACTGTGTCGCAAGATGGCCAGCGCGTCACGTCGTCCGAGATGTGTCAAGGCACGACGGTCGCGCTGTCTAGTGTCGCCAAGTACTGGGTGCTCACTAACCTGTTCCCGGGACCGATACCTCAGACGAGGTATTTATGTTTATCACTTAGGTTTCACGGTAAAGATGTGGTGACCGGTGAACTGTGTGGTAAAGATGTGGTGACCGGTGAACTGTGTGGTAAAGATGTGGTGACCGGTGAACTGTGTGGTAAAGATGTGGTGACTGGTGAACTGTGTGGTAAAGATGTGGTGACCGGTGAACTGTGTGGTAAAGATGTGGTGACCGGTGAACTGTGTGGTAAAGATGTGGTGACTGGTGAACTGTGTGGTAAAGATGTGGTGACCGGTGAACTGTGTGGTAAAGATGTGGTGACCGGTGAACTGTGTGGTAAAGATGTGGTGACCGGTGAACTGTGTGGTAAAGATGTGGTGACCGGTGAACTGTGTGGTAAAGATGTGGTGACCGGTGAACTGTGTGGTAAAGATGTGGTGACTGGTGAACTGTGTGGTAAAGATGTGGTGACCGGTGAACTGTGTGGTAAAGATGTGGTGACTGGTGAACTGTGTGGTAAAGATGTGGTGACTGGTGAACTGTGTGGTAAAGATGTGGTGACTGGTGAACTGTGTAGTAAAGATGTGGTGACTGGTGAACTGTGTGGTAAAGATGTGGTGACTGGTGAACTGTGTGGTAAAGATGTGGTGACCGGTGAACTGTGTGGACTGAATGTGTCGGTGTACGGACTACAGACTCCGAGGATGGATAAGGACGGAACGACGTGTCTGACGCCAGTGAACGTGGGGGTGGAAACCATGACGCTGATACAACAGCATCAGGCCCAGACTATCCCGGTGTCGGTGGGCGGGGTGTCGACCCTAACACTGCCGTCGCCCCAGCTGGCCACAGTCGCCCTCCCCACCACGGCGTCGCCCCACGGCCAGCTGCAAGACAAGTCCACCTGCGTGACGGAGCAGTGTGGCAACAACCAGGTGCACTGCCAGGTGCAGTGCGACTTGACTCTTGTACAACAGCCGACACTGGTGCCAACCTCACAGAGCATCACGCTGACCCCGGAACAACACCAGCAGCTGCAGCAACAGGTTCTCCAACACCAGGCGTTGGCCCAGACACAGGACGGCCAACAGATAGAGCTGGTGGTGCAGGAGGTGAAAGTGGAGGAGGACAAGAACAAGGACGGCAGCAACAGCTACCAGGGCGACAAGCAGGGGCCTCCCAACATCCAGCAGATCCTCGTGGAAAAACCCCTCGGCGATAATATCGTCTACAAGCCGGTGAATGTGGACGATATCAACCAGCTGTTGGCGTATCACGAGGTGTTCGGAAAGCTGCAGGGTGGGGAGCAGCCCCCTCCAGTCCAGCCCCCGCCCCCCGCCAAGACCCCGGAGAGTGACGAGAGCCCTGCCAGTCCCCCGGGGACCCACGCGTGCGACCTGTGCAGCAAGGTGTTCCCCTACCGCTACCAGATGATCGTCCACCGGCGGTACCACACGGAGCGGAAGCCATTCCAGTGCCAGGTTTGCGGACGATCGTTTGAAAACGCTGAGGAACTGAGTCAACACGGGAAGAGCTGCCATCAAGACAACAATTCCATGCTGACTTGCCAGGTTTGCTTCCACGTGTTTGCGAGTGCCGGCAGTCTGGAGAGACATGTGCGACGACACTGCCTTGACAAACCGTACCAGTGTGCGATCTGCAACAAGGGCTTCGGTCGCAAGGAGCACCTGGACAATCACCAACGCTGCCACAGTGGCGAGACACCGTACCGCTGCCAGTTCTGTGAGAAGAGCTTCAGTCGTAAGGAACACATGGTCAACCACGTGCGGAAACACACCGGTGACACGCCCAACCGGTGTGATATTTGTAAGAAAGCGTTCACCAGGCGGGAACACTACCTGAATCACGTGCTGTGGCATACAGGCGAGACTCCGCACACGTGCGCCGTCTGCGGCAAGAAGTACACGCGCAAGGAACACCTGGCCAACCACGAGCGGAGCCACACCAACGACACGCCGTTCCGGTGTGAGGTGTGCAGCAAGGCGTTCACACGCAAGGAGCACTTCACCAACCACATTATGTGGCACACGGGCGAGACCCCGCACAGGTGTGACTTCTGCTCCAAGACGTTCACCCGCAAGGAACATCTGCTGAACCACGTGAGGCAACACACCGGAGAGTCACCTCACCGCTGCAACTACTGCACCAAGAGTTTCACACGCAAGgAACATTTGGTCAATCACGTCAGGCAGCATACAGGCGAGACGCCGTTCCAGTGTCAGTTTTGTCCGAAGGCGTTCACCCGCAAGGACCACCTGGTGAACCACGTGAGACAGCATACCGGGGAGTCACCTCACAAGTGCACCTACTGCACTAAGAGCTTCACGAGGAAGGAGCACCTGACCAACCACATACGACAACATACGGGAGAGTCGCCCCACAAATGTTCCTACTGCTCCAAGTTCTTCACGAGGAAGGAACACCTCACGAACCACATAAGGATCCACACGGGTGAGTCGCCGCACCGCTGCGAGCTGTGCAGCAAGACGTTCACCCGCAAGGAGCACCTCGTCAGCCATCTCCGGGTGCACGCGGGTGACGCCGAACACACCTGCAACGTGTGCAGCAAGCCGTTCGTCAAGAAGGAGCACCTGGTCAATCACATGAGGAGCCACTCGGGCGAGCGACCCTACGCCTGCGACACCTGCGGCAAGAGCTTCCCGCTCAAGGGCAACCTGCTGTTTCATCAGCGGTCGCACAACAAGGGCGCGACGGAGCGGCCCTTCCGGTGTGACCAGTGTCCCAAGGACTTCACCTGCAAGGGCCACCTGGTCAGTCACAAGCGGAGTCACGAAGGCACGCCCTTCACCTGCGAACAGTGCGACAAGAGCTTCACTAGCAAGGAGAGTCTGATAGACCATGTGAAGGAGCATGAGATGGAAGGGAAccccacccccaccaccaccgcaCTGCCTCCCCCTCCTCCACCCCTGCACTCGGTGCCGATGACAAACGCTGTGCTCGCCACTTACTGA
Protein Sequence: MRGNTTATAIFPLAQQFWEECMYNQLTVSQDGQRVTSSEMCQGTTVALSSVAKYWVLTNLFPGPIPQTRYLCLSLRFHGKDVVTGELCGKDVVTGELCGKDVVTGELCGKDVVTGELCGKDVVTGELCGKDVVTGELCGKDVVTGELCGKDVVTGELCGKDVVTGELCGKDVVTGELCGKDVVTGELCGKDVVTGELCGKDVVTGELCGKDVVTGELCGKDVVTGELCGKDVVTGELCGKDVVTGELCSKDVVTGELCGKDVVTGELCGKDVVTGELCGLNVSVYGLQTPRMDKDGTTCLTPVNVGVETMTLIQQHQAQTIPVSVGGVSTLTLPSPQLATVALPTTASPHGQLQDKSTCVTEQCGNNQVHCQVQCDLTLVQQPTLVPTSQSITLTPEQHQQLQQQVLQHQALAQTQDGQQIELVVQEVKVEEDKNKDGSNSYQGDKQGPPNIQQILVEKPLGDNIVYKPVNVDDINQLLAYHEVFGKLQGGEQPPPVQPPPPAKTPESDESPASPPGTHACDLCSKVFPYRYQMIVHRRYHTERKPFQCQVCGRSFENAEELSQHGKSCHQDNNSMLTCQVCFHVFASAGSLERHVRRHCLDKPYQCAICNKGFGRKEHLDNHQRCHSGETPYRCQFCEKSFSRKEHMVNHVRKHTGDTPNRCDICKKAFTRREHYLNHVLWHTGETPHTCAVCGKKYTRKEHLANHERSHTNDTPFRCEVCSKAFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCTKSFTRKEHLVNHVRQHTGETPFQCQFCPKAFTRKDHLVNHVRQHTGESPHKCTYCTKSFTRKEHLTNHIRQHTGESPHKCSYCSKFFTRKEHLTNHIRIHTGESPHRCELCSKTFTRKEHLVSHLRVHAGDAEHTCNVCSKPFVKKEHLVNHMRSHSGERPYACDTCGKSFPLKGNLLFHQRSHNKGATERPFRCDQCPKDFTCKGHLVSHKRSHEGTPFTCEQCDKSFTSKESLIDHVKEHEMEGNPTPTTTALPPPPPPLHSVPMTNAVLATY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -