Amod033297.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Allygus modestus
Gene Symbol
-
Assembly
GCA_963675035.1
Location
OY776111.1:474127464-474149974[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 52 0.00036 0.013 18.6 1.4 1 23 370 393 370 393 0.96
2 52 0.00011 0.004 20.1 0.4 1 23 400 422 400 422 0.97
3 52 0.00048 0.017 18.2 2.9 1 23 428 450 428 450 0.96
4 52 0.00029 0.01 18.9 0.1 1 23 456 478 456 478 0.97
5 52 0.012 0.41 13.8 3.4 1 23 484 506 484 506 0.97
6 52 0.0054 0.19 14.9 1.2 1 23 512 534 512 534 0.97
7 52 0.00025 0.0087 19.1 3.8 1 23 540 562 540 562 0.97
8 52 0.097 3.4 10.9 2.9 1 23 568 590 568 590 0.97
9 52 7.7e-05 0.0027 20.7 0.4 1 23 596 618 596 618 0.99
10 52 1.7e-05 0.00058 22.8 1.8 1 23 624 646 624 646 0.98
11 52 0.0018 0.061 16.4 1.9 1 23 652 674 652 674 0.95
12 52 0.0006 0.021 17.9 2.4 1 23 680 702 680 702 0.97
13 52 0.0013 0.047 16.8 1.9 1 23 708 730 708 730 0.97
14 52 5.9e-05 0.002 21.0 0.2 1 23 736 758 736 758 0.97
15 52 3.3e-05 0.0011 21.8 1.4 1 23 764 786 764 786 0.98
16 52 5.9e-05 0.0021 21.0 0.4 2 23 793 814 792 814 0.94
17 52 0.0056 0.19 14.8 0.2 2 23 820 841 819 841 0.96
18 52 0.28 9.6 9.5 0.6 1 23 847 869 847 869 0.97
19 52 0.12 4.3 10.6 0.2 1 23 875 897 875 897 0.96
20 52 0.0018 0.062 16.4 5.8 1 23 931 953 931 953 0.96
21 52 0.0081 0.28 14.3 0.9 1 23 959 981 959 981 0.97
22 52 0.023 0.8 12.9 2.4 1 23 1021 1043 1021 1043 0.97
23 52 0.00037 0.013 18.5 1.0 1 23 1049 1071 1049 1071 0.97
24 52 0.026 0.92 12.7 2.0 1 23 1077 1099 1077 1099 0.98
25 52 4.6 1.6e+02 5.7 1.0 2 23 1103 1125 1103 1125 0.90
26 52 0.00066 0.023 17.7 2.4 2 23 1132 1153 1132 1153 0.97
27 52 0.0085 0.29 14.3 8.0 1 23 1159 1181 1159 1181 0.97
28 52 8e-05 0.0028 20.6 1.7 1 23 1187 1209 1187 1209 0.97
29 52 9.1e-06 0.00032 23.6 0.3 1 23 1215 1237 1215 1237 0.97
30 52 2.1e-05 0.00074 22.4 2.0 1 23 1243 1265 1243 1265 0.98
31 52 0.00038 0.013 18.5 3.4 1 23 1271 1293 1271 1293 0.98
32 52 9.9e-06 0.00034 23.5 0.7 2 23 1300 1321 1299 1321 0.96
33 52 7.5e-05 0.0026 20.7 2.9 1 23 1327 1349 1327 1349 0.98
34 52 0.00024 0.0082 19.1 0.8 2 23 1356 1377 1355 1377 0.96
35 52 5.8e-06 0.0002 24.2 0.5 1 23 1383 1405 1383 1405 0.97
36 52 0.00017 0.006 19.6 2.3 1 23 1411 1433 1411 1433 0.98
37 52 0.00067 0.023 17.7 2.2 1 23 1439 1461 1439 1461 0.97
38 52 2.6e-05 0.00091 22.2 1.0 1 23 1467 1489 1467 1489 0.96
39 52 0.0058 0.2 14.8 4.2 1 23 1495 1517 1495 1517 0.98
40 52 0.00031 0.011 18.8 2.0 1 23 1523 1545 1523 1545 0.98
41 52 0.01 0.35 14.0 1.1 3 23 1553 1573 1551 1573 0.98
42 52 0.00079 0.028 17.5 0.7 1 23 1579 1601 1579 1601 0.96
43 52 0.00016 0.0055 19.7 1.3 1 23 1607 1629 1607 1629 0.96
44 52 0.028 0.97 12.6 4.4 1 23 1635 1657 1635 1657 0.97
45 52 0.0002 0.0068 19.4 0.9 1 23 1663 1685 1663 1685 0.98
46 52 0.00011 0.0038 20.2 1.8 1 23 1691 1713 1691 1713 0.97
47 52 0.00025 0.0087 19.1 0.6 1 23 1719 1741 1719 1741 0.97
48 52 0.1 3.6 10.8 4.7 1 23 1747 1769 1747 1769 0.98
49 52 2.4e-05 0.00085 22.3 0.3 1 23 1775 1797 1775 1797 0.98
50 52 0.00034 0.012 18.6 1.8 1 23 1803 1825 1803 1825 0.97
51 52 1.1e-05 0.00037 23.4 0.4 1 23 1831 1853 1831 1853 0.97
52 52 3.1e-06 0.00011 25.1 1.7 1 23 1859 1881 1859 1881 0.98

Sequence Information

Coding Sequence
ATGGAAGCTGGCCCTTCATATGAAGGGTCCCAATGGAAGACCAATGGAAAACCTCCACCTCATGTTTTCAGCCTTCGCCCCGAAGGTGAAGATGAGTTCACGCGACCCGGCTTGCCAGGCCGCTGCACATCGAggtatataaataaaaagtcaatCCCTCCCAACATGAACAACACTAACCACCTCCACCCGACCATCGTCGAGTCGTTCTCTCTGCCCGCGAGTAAAACCTGCGCTGAGGAGAGTCCGACAAAGCCGAATCAGAAGCCGACAACGTTCACGATGAAGAAGAAGAAGCTAGAACACTTTATCGACAACTTGTTCAAAGTGGCAAACGAGAAGGTTACCATCGAAGACGATAGGTTCGAGGTTAAAAACGATGTTTCGTATGATGTCGAATACGGCGAAGTACACAGAGCGGTAAAGAGCGAAAACGATACGGAGAAAATCTGTGTGAAAAGAGAGATAAAGATGGAGAATGGAGAGAGGAGTTGCGACAGCGATGTCGGAAGTCTCGAATTTGGAGAGGGGAAGAGGGATTTGGACGAGATGACGCCTAAGTTGGAACCGCAGGTGGTGTTGAAGACGGAAGACGTGAAACCGACGGAGAGAGTGTTTGGGTGGTGCGACATCGGGGATCTGAGCAGTCCGCTGGTCGGAGGGAGCAGGGGCGATGTGACGAGGGAGTCCAGGAGCGGTTGGGAGGAGAGGGAGTTCGGGGTGAAACAGGAACCAGCTTCCACCCTTGCCCAGGAGATCAGCGAAGATTACAAACTCCATCTGTTTGGAAGTTCGGAAGTCAAAGAAGAAACGATTGAAGAGTATGAAATGAAACTGGAACCGGAGACACACATAGAAGATGGTTTCAGCGAAGAAGAATATGACTCAGATCAAAGGCAAAGTGAAGATGTACAAAATAAAACTTCTAAAGCTAAAGAGGATGTAGAAGATTCTTCGAGTTTGGAAAAATCACTAATTGAGACCTGGAAGAAGCCGGCGGAAATGAATATCATGAAGAGTTTACTCTATGCCAAAAAAACCAAGCCAAAAGTCGTTGATAAAGATTACAGTTGGACAACTAAACCTTCTCGCAAGAAAGGGGAGACGTACCAGTGTGATGTTTGTAAAAAGATTTTCATGCAGAAAGGTAACTTGAGGAGTCACATTTTCAGTTTTCACATGGATCAACCGAACGAACATAAATGTGAAACTTGTGGAAAAGAGTTCCCGTATCCGAGCGCGTTGCGGAAGCACGCGTTGATTCACAGTAGTGAAAAGAAGTTCAAGTGTGATATTTGCGGAAAATGCTTTGCATTCAAAGGGAACATGAAGGCTCATAGGTTTCTTCACACGGGAAAAATGCCTTTTTCATGTGGAATATGTGAGAAGAAGTTTCCCACCGAGTCCAGCTTGAATAGCCACATCGATGTACATATGGGAGTAAAAGCGTTTTCATGCTCGATGTGCGAGAGAAAGTTTCGACACAGGAGAGGATTAGAAAATCATGAGAGGCTGCACACAGGTGAAAATATGTTTGAATGTAACCTTTGCGATAAGAAGTACAACTTGAAGACGTCGTTGAACAATCACTTGCTCCTGCACAGTGACGAGAAACCGTATTGCTGCGACAACTGTGGAAAAGCGTTCAGAACGAAGAAAGCGCTTTGTAGTCATATTCTCATTCATACGGGTGAAAAACCATATCCGTGTTCGATATGTAGCAAACGGTTCCGGCTGAGGAGTACACTCAAGTGTCACTTGCTGATTCACAGCGGAGTTCAACCGTTCAAGTGCGACGTTTGTGGGAAAGGTTACGGCAAGAGGAGCAACCTGGAGGCGCATAAGATGACGCACACAGGAGAGCGCCCGTTCGAGTGCACCGTGTGCAACAAGAAGTTCATCACGCGATCAAACCTCAGCAACCATATGACCTCACATTCAGACAAGAAGCCGTACGCTTGCACGGAGTGTGACAAGAAGTTTAGAGTGAAGGCGAACTTGGAGAGTCATTGTAGGATACATACAGGGGAAAAACCCTTCGCCTGCGATAAGTGTGATAAGCGATTCTGTCTAAAGGGCAGTTTGACCTCACACATTCTGACGCACTCGGAGGAAAAACCGTTCTCCTGTACCGTTTGCGGTAAACAGTTCCGGTTGAAAACAAGCCTGGAAAACCATTTTCGTCTGCATACCGGGGAAAAACCTTTTGAATGTTCGACCTGCGGGAAAAGGTTTAGTATTAAAGGGAATTTGAACGCTCACATTTTGCTTCACAGCAAGGAAAAGTTGTACAATTGTAAAATCTGCGACAAGACGTTCACCAACAAGTCGAGTTTGGACAGTCACGCTAGCACGCATTCGGGGGAAAAACCCTGGACTTGTGAGGTGTGTGGGAGGAACTTCTCTTcgaaaagtaatttgaaaacgCACGCTTTGCTGCACGGCGAGCGGTCACTCTCTTGTGAAATTTGTGACCAGAAGTTTGCGCAGAAGGGAACGCTGATGGGGCACTACCAGGTGCACAACAACAGAGACTCTTTCCCGTGTCAGGTTTGTGATTTTGTGACAAACTCCAAAACGGAGTACAGATCACATTCGGCGACCCACTCGGAAGTGACTTGGTTCGATTGTTTCATCTGCGACTTGAAAGTGACCAGTCAGGAAAATCTCGACTTGCACATACTGCAGCACAAAGCCGAGAAACCTTTCAAATGTGATAAATGCTGTAAACGATTCTTCTCAAGGAAAGACTTGCGGTCTCACATGACGTGTCATACGGGGTCGAAGCCATTTGCATGCAAATACTGTGGGAAATCCTTTACTCATCGGTGTTATCTGAAGAGCCACGAACTGATACATACCGGAGAACGGCCTTTTATCTGCGGTTCTTGTGAAAAAGGTTTTACgaagaaaaaatatttagaaGCACACAAACTTACGCACACCGGAGACAAGCGTCACGTTTGCAATCTTTGTGGGAAAGCTTTTACCCTGAAGACGAGATACAACCATAGGGGCAATCTGGAGAAACATTCGAAGACACACGTAAGTGGGAAATTATTCGCTTGCAATTTGTGTGATAAGAAATTCCACAACCAGTTTGTCTTGAAAAGTCACATAACAGTTCACAAGAAGGAAACACCTTATCAGTGCACTGCTTGCGAgaaaaaattcacttttaaaggGAACTTGAGGGTCCATATGTTGGATCATAGTGGAATCAGACCATACGAATGTGAAACCTGCCATCAGACGTTTAGCTCCAAAGATGTGTGGAAAGATCACAGAGTCACTCACGGAGCCGAGAGGTGTAAGAATTGTAAAAAACGATTCTTGACGAGAGAAGAACTTGATGAACATGTCGCTCAAAATCACAAGAAGAGAGTGTTTCCAACATGCGACGTCTGTGGGAGAACGTTCAACAACAAGACTAAACTGCAAATTCACAAGAAAAGGCACAATGTTCCAACGCCTCATGAGTGTGATGAGTGTGGCAAGAAGTTTACACATCTGTGCTACTTGAAAACTCACCAGCTGAAACATTCTGGAGAAAAACCATTTGCATGTGACAAATGTGACAAGAAATTTTCCCTGAAGTCGTATCTGCGAAATCATCAAATGGTCCATGCCAACTTTAAACCCTACATATGTGATGTTTGTGACAAGGCTTTCACTCAAAAAGCAAACTTGAAGAGTCATCAACTTCTGCATAGTGGAGAAAAACCCTATCAGTGTGACCagtgtgagaagtcttttacgcAGAAGGCGTATTTGAAGACACACCAGTTGAGTCACAGCGGTGAAAAACCCTACTCTTGTGACTTGTGTGACAAAGCTTTCACCCAAAAGTGTTATTTGAAAGCTCATAAATTGACACACTCAGAGGAGAAGCCATGGGTTTGCAAAATATGTGATAAGAGTTTCACTCAGAAAAGCTATTTGAAAAGTCATGAAATGATTCATAATGACGACAGACCGTATCCTTGTGAGTTGTGCGATAAAGCTTTCACACAGAAATGCTACTTGAAGAATCATCAGTTGACACACACCGATGAAAAGCCTTGGGTTTGCGAAGTCTGTGACAAAGCGTTCACTCAGCAGTGCTACTTGAAAACGCACCTTTTGATACACACTGACGAAAAACGGTTTGCATGCGAAATTTGCGATAAAAGGTTCAGCCAGAAGGGATATCTCAAATCTCACATGCTGATTCATAGCGGGGAGCGGCCGTTTGTTTGCAACGTGTGCGATAAAGCGTTCACTCAGAAATGTTACTTGAAAGCTCACGAATCGACTCACTCGGACGAGAAACCGTTTATTTGTCTCGAGTGCGGGAAAGGTTTTACACAAAGATGCTACCTCAAGACTCACCAACTTGTCCACTCGGCTGATAAACCTTACGCGTGTTCGGTTTGTAACAAAAAATTCAAGCAGAAAAGTAATTTGAAGATTCACGAGCTCATACACTCCGGGGAAAAACCATTTTCTTGCCACCTCTGCGATAAAAAGTTCCTTCAAAACAGCACTTTGAAAACTCACCTTCTCACTCACAACGAGGAAGGGCAGTTCAATTGTACGGTTTGTGACAAAAAGTTCACTTTGAAAACATCCTTGAACAACCATCTGTTGACACATTCGGGCGAAAAACCTTTCGGATGCCACGTCTGCGGGAAACGTTTCCTCCTAAAGGGAAGCTTGGAGAGTCACATGAGAATTCACACTGGGGAAAAGCCTTTCGAGTGCCAAGTCTGTAATAAAAGATTTACTCTTAAAGGAAACTTGAAGATTCATTCGTTGATCCACTCGGAAGACAGGCCTCACGCTTGTACGGAGTGCGACAAGAGATTTGTCCTCAAGAGCAGTCTAGAAAGCCACCTTCGAATCCATACGGGCGAGAAACCCTTCTGTTGCGCTGTCTGTGGCAAAGCGTTCTGCTTCAAGTCGATGCTCGATTCTCACTTTCGTATTCACACCGGAGAAAAACCTTTCCAATGTTCCGAGTGTCCCAAGAGCTTCAGGCTGAAGAGCACGTTGGACGCTCACTTTAGGATTCACACCGGCGAAAAGCCCTTCGCTTGTCCGCAGTGCAACAAGTGTTTCTCGCTGAAAGGGAATCTCTCGAGTCACATGATGTTGCATACCGGCGAAAAGCCGTACGAGTGCGAGGTATGCAATAAGAAGTTCACGTTGAAGTCGAGTTTGAACACGCACGCACTGATTCATACCGGCGAAAAACCCTTTGTTTGCACCGTCTGTCACAAAGGGTTCCGACTCAAGTGCAGCTTGGACGCGCATTTCCGAATGCATACGGGAGAAATGCCTTTCGAGTGTAGTATCTGCGATAAGAAATTCAATCTCCGAGGAAACCTGAACGCCCACATGCTAATCCATTCTGGGGAGAAACCTTACGATTGTTCCATGTGCGATAAGAAATTTCGGCTGAAGAGCAGTTTGGAGAGCCACACAAGACTGCACACGGGTATTAAGCCGTTCCCGTGCGGGATCTGTGGGAAAACTTTCAGCCAGAAGAGCGGACTCGAGAGCCACTTTAGGCTGCACACGGGCGAAAAACCCTTCGTGTGCAAAGTCTGCCAGAAGCAGTTCAGTCAGAAGGGGAATCTGAAGAACCATATGAAGATACACTCACGGGACGAGAGCTATAGCTATAACACGAGGATGCGCACTTTCAACAACATCATCGAGAACATGTTCAATGGAAGCCACTTCCTGATCCCCCAACAGGAAGAGTTCCCCTGTAAGTTCTGCGGGTGCAAGTTCAAGGAGAAGTGCGAGCTGATGTTTCACGAGATGATGCACGGGAAGCAGTTACCGCTGCCGTGTCCGCCAATGATGTTCAACCCGGCAAAACCATTTGTCATGGGCTACCCGCAACGCCCGCCGCCGGAGGCTATGTGTATAGACTTGACCCTCCCGCCGACCCGACACTACCAATAA
Protein Sequence
MEAGPSYEGSQWKTNGKPPPHVFSLRPEGEDEFTRPGLPGRCTSRYINKKSIPPNMNNTNHLHPTIVESFSLPASKTCAEESPTKPNQKPTTFTMKKKKLEHFIDNLFKVANEKVTIEDDRFEVKNDVSYDVEYGEVHRAVKSENDTEKICVKREIKMENGERSCDSDVGSLEFGEGKRDLDEMTPKLEPQVVLKTEDVKPTERVFGWCDIGDLSSPLVGGSRGDVTRESRSGWEEREFGVKQEPASTLAQEISEDYKLHLFGSSEVKEETIEEYEMKLEPETHIEDGFSEEEYDSDQRQSEDVQNKTSKAKEDVEDSSSLEKSLIETWKKPAEMNIMKSLLYAKKTKPKVVDKDYSWTTKPSRKKGETYQCDVCKKIFMQKGNLRSHIFSFHMDQPNEHKCETCGKEFPYPSALRKHALIHSSEKKFKCDICGKCFAFKGNMKAHRFLHTGKMPFSCGICEKKFPTESSLNSHIDVHMGVKAFSCSMCERKFRHRRGLENHERLHTGENMFECNLCDKKYNLKTSLNNHLLLHSDEKPYCCDNCGKAFRTKKALCSHILIHTGEKPYPCSICSKRFRLRSTLKCHLLIHSGVQPFKCDVCGKGYGKRSNLEAHKMTHTGERPFECTVCNKKFITRSNLSNHMTSHSDKKPYACTECDKKFRVKANLESHCRIHTGEKPFACDKCDKRFCLKGSLTSHILTHSEEKPFSCTVCGKQFRLKTSLENHFRLHTGEKPFECSTCGKRFSIKGNLNAHILLHSKEKLYNCKICDKTFTNKSSLDSHASTHSGEKPWTCEVCGRNFSSKSNLKTHALLHGERSLSCEICDQKFAQKGTLMGHYQVHNNRDSFPCQVCDFVTNSKTEYRSHSATHSEVTWFDCFICDLKVTSQENLDLHILQHKAEKPFKCDKCCKRFFSRKDLRSHMTCHTGSKPFACKYCGKSFTHRCYLKSHELIHTGERPFICGSCEKGFTKKKYLEAHKLTHTGDKRHVCNLCGKAFTLKTRYNHRGNLEKHSKTHVSGKLFACNLCDKKFHNQFVLKSHITVHKKETPYQCTACEKKFTFKGNLRVHMLDHSGIRPYECETCHQTFSSKDVWKDHRVTHGAERCKNCKKRFLTREELDEHVAQNHKKRVFPTCDVCGRTFNNKTKLQIHKKRHNVPTPHECDECGKKFTHLCYLKTHQLKHSGEKPFACDKCDKKFSLKSYLRNHQMVHANFKPYICDVCDKAFTQKANLKSHQLLHSGEKPYQCDQCEKSFTQKAYLKTHQLSHSGEKPYSCDLCDKAFTQKCYLKAHKLTHSEEKPWVCKICDKSFTQKSYLKSHEMIHNDDRPYPCELCDKAFTQKCYLKNHQLTHTDEKPWVCEVCDKAFTQQCYLKTHLLIHTDEKRFACEICDKRFSQKGYLKSHMLIHSGERPFVCNVCDKAFTQKCYLKAHESTHSDEKPFICLECGKGFTQRCYLKTHQLVHSADKPYACSVCNKKFKQKSNLKIHELIHSGEKPFSCHLCDKKFLQNSTLKTHLLTHNEEGQFNCTVCDKKFTLKTSLNNHLLTHSGEKPFGCHVCGKRFLLKGSLESHMRIHTGEKPFECQVCNKRFTLKGNLKIHSLIHSEDRPHACTECDKRFVLKSSLESHLRIHTGEKPFCCAVCGKAFCFKSMLDSHFRIHTGEKPFQCSECPKSFRLKSTLDAHFRIHTGEKPFACPQCNKCFSLKGNLSSHMMLHTGEKPYECEVCNKKFTLKSSLNTHALIHTGEKPFVCTVCHKGFRLKCSLDAHFRMHTGEMPFECSICDKKFNLRGNLNAHMLIHSGEKPYDCSMCDKKFRLKSSLESHTRLHTGIKPFPCGICGKTFSQKSGLESHFRLHTGEKPFVCKVCQKQFSQKGNLKNHMKIHSRDESYSYNTRMRTFNNIIENMFNGSHFLIPQQEEFPCKFCGCKFKEKCELMFHEMMHGKQLPLPCPPMMFNPAKPFVMGYPQRPPPEAMCIDLTLPPTRHYQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-