Amod002484.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Allygus modestus
Gene Symbol
clz9
Assembly
GCA_963675035.1
Location
OY776111.1:21962727-21969340[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.8e-09 1.5e-06 30.4 0.0 1 35 18 53 18 60 0.91

Sequence Information

Coding Sequence
ATGGTGAGGACATATGTGAGAAAAACACAGAGAGGAGCTGGCTTAACGTATACCCATGAGGACTTAGAGAAGGCAATTGAAGATGTAAGAAATGGGAATAAAACCACACGTGGAGCATCTTTACATTACAACATTCCAAGATCTACCCTAAAACACCGTATTCTTGGGACTCGGGGCAAAGGCAACATAACCGTAGATGGCAAGGGCGGTGGTGGGGTACACTCTTTCTTGTCTGCTGCGGCTGAAGAGGAGATTGCAAATTGTATCAAAGTGATGGACAGAAATGGTTTTGGTTTATCAAGAAACGAGGTCCTGGATCTGGTTCAAAGTTATATCAGACAAAACAATATTGAATGTCGGTTTAAGGACCAGCGACCAGGCGCAGACTGGTTCATAGCTTTTAAAGCTAGACATCGTTTGTCATTAAAAAAGCCCCAAAGTATAGAGCATGTAAGATGCGACCAAACTAATCCTTGGGTTATCTACAACTTCTTTGATGTTTTAGATGATGTCATAAATGATCTGAAGCTGACTGGCAAACCGAGCCAAATTTTTAACTGCGATGAGACATCATTTTGCCATGACCCATCGAAAACAAAAGTCTTAGGAATGATTGGCGAGAAAAGTAAACGTAAAACAAGTACTTCTGGTCGTGAAAACACATCCGTTCTTTTATGCTGTTCTGCTGATGGACGAATGCTGCCACCTCTTTGTGTATTCAAAGGTAAATTTGTAATGGAGAATTGGCTGGACCAAAACATCGTAACACAAACTGCAATATCAGTAACCTCTCGAGGGTGGATGGAAACAACCTTATTTTTCAACTGGTTCCGTGATGTTTTTTTGAAGAATATAGGTGAGGAGAGGCCTGTGATCCTTATCTATGATGGGCACACAACCCATATATCAACCAATTTGATAAGATTAGCCATTGAAAATCAAGTGACCATTATGAAGTTGCCCCCACACACCACACATGTCTTGCAGCCTTTGGACGTCGCTGTTTTTAAAGGCCTGAAAACAAACTGGGACAAAGAGCTATGCAAGTGGCAGAGAGCCAATCCACGTAAGAAAATACCTAAAGCTGAGTTTGTGGCTCTTATAACAAACTTAGCCAAAGATGTGCCTGCATTACACATTACGAATGGATTCAAGACCACAGGCATCTATGACGATGAGGAGAGAGGACCCAACAGAAAACGTATTTCGGAAAGCATATTCAAGAAGACCGATTTAGATAGGTATAAAAAAAATCTCCCAAATCCTAATGCAGCACCAGAAGAAGTAGGCCTGCCCACAACTTCAACAGTAGCAGCGGAAGCACCCCAAACAGTGGCAGTGGAAGTAGAGGTAACTACCCCGACTGTGGCACTAGAAGTGGAGGTAATAACTACCCCGACTGTGGCAGTAGAAGTGGAGGTACCGACTACCCCATCAGTGACAGTGGAAGTACCAAATTCCCCATCAGCTGCAGAAGACTTACCGACTACCCCATCAGTTTCAGTGCCAGCTGGTGCAGCCCAAGCCAGTGCCACAGAGCTTCCGGTGGTAAGTACATCCAGGCCTGTGGGTGATAATCCCAAAAGTTTTGAGGAACTATTGTTAGATTTATTGAAGAAAGAAAAAAAACCAGATACGTCTGAGAAAAAACGAAAAAGAATTGTAACTAACTGTGAAATCATCACCACACCGAAATATCTGGCGATGAAAGAGGAGGAAGAGAAAGAGAAAGAAGAAgtggcaaaaagaaaaaaaatcaagcaAGAAGCAAAATCTATGAAGAAAGTAAATTTGAAAACTGTAAAGAAAATTGATCCTCCTACAAAGAAGACCAGAAAAAAAGGAAAAGACAATAATACCGATGTTGAGACAACTGACGAAAGTGACACGTTCTCCGTACAAGACAATGACTCTGACCAGGCATCAAGTtccgaagaagaagaagaacttgAATTGTGTTCAATAAAAGAAAATGATTACTGCATTGTAAAGGATAAAACAAAGCGAGTTGATGAAATATTCAACAATCTTTTCTCAGAAATGAAAGACACTGCTGAAAAGCTTGACGTTGAAGTGAAGAAGCCTAGGGTTGTTGGTCGCCAAACACAGCGCCAAAACTTACCAGCCGAATCTTCTGAAGAATACTTCAAAAGAACCATCTACATTCCTCTTGTTGACCATGTCTTGACAGACTTAAATGGAGGTATGAACCACGTACGAGCAGAGCAGCCAGTCGCGCTAGATGTCACTCCTGCACAGCCCTCTCCGTACGTGCTGCACAGGCTAGTGGCGACAGAGGTGTCCGAAGTCAACTTTGTGGACTTCGAGGTCATAGAACAACAACATAGGGAGCTGCTCGTTTCTCTGGACACACGTGACGAGCCATCGTTCCCTGCGGATGATGGAGACACAGTGCGCTACACCAACACGACCACAAGATACTATGTGCCTTGA
Protein Sequence
MVRTYVRKTQRGAGLTYTHEDLEKAIEDVRNGNKTTRGASLHYNIPRSTLKHRILGTRGKGNITVDGKGGGGVHSFLSAAAEEEIANCIKVMDRNGFGLSRNEVLDLVQSYIRQNNIECRFKDQRPGADWFIAFKARHRLSLKKPQSIEHVRCDQTNPWVIYNFFDVLDDVINDLKLTGKPSQIFNCDETSFCHDPSKTKVLGMIGEKSKRKTSTSGRENTSVLLCCSADGRMLPPLCVFKGKFVMENWLDQNIVTQTAISVTSRGWMETTLFFNWFRDVFLKNIGEERPVILIYDGHTTHISTNLIRLAIENQVTIMKLPPHTTHVLQPLDVAVFKGLKTNWDKELCKWQRANPRKKIPKAEFVALITNLAKDVPALHITNGFKTTGIYDDEERGPNRKRISESIFKKTDLDRYKKNLPNPNAAPEEVGLPTTSTVAAEAPQTVAVEVEVTTPTVALEVEVITTPTVAVEVEVPTTPSVTVEVPNSPSAAEDLPTTPSVSVPAGAAQASATELPVVSTSRPVGDNPKSFEELLLDLLKKEKKPDTSEKKRKRIVTNCEIITTPKYLAMKEEEEKEKEEVAKRKKIKQEAKSMKKVNLKTVKKIDPPTKKTRKKGKDNNTDVETTDESDTFSVQDNDSDQASSSEEEEELELCSIKENDYCIVKDKTKRVDEIFNNLFSEMKDTAEKLDVEVKKPRVVGRQTQRQNLPAESSEEYFKRTIYIPLVDHVLTDLNGGMNHVRAEQPVALDVTPAQPSPYVLHRLVATEVSEVNFVDFEVIEQQHRELLVSLDTRDEPSFPADDGDTVRYTNTTTRYYVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00051713; iTF_00051714; iTF_00051715; iTF_00051716; iTF_00051717; iTF_00051749; iTF_00051723; iTF_00051724; iTF_00051731; iTF_00051766; iTF_00051711; iTF_00051712;
90% Identity
iTF_00051766;
80% Identity
iTF_00051723;