Amod018393.1
Basic Information
- Insect
- Allygus modestus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963675035.1
- Location
- OY776111.1:223171652-223177140[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-17 2.4e-14 55.4 0.1 1 45 92 137 92 137 0.96 2 2 1.1e-17 8.8e-15 56.8 0.0 1 43 511 554 511 556 0.95
Sequence Information
- Coding Sequence
- ATGTACTCATACCCTAGCCTGCGACTTATTGTGGACTCATACCCTAGCCTGCGTCTTGATGTAGACTCATACCCTATCCTGCGACTTATTGTAGACTCATACCCTAGCCTGCGTCTTGATGTAGACTCATACCCTAGCCTGCGTCTTGTTGTAGACTCATACCCTAGCCTGAGTCTTGATGTAGACTCATACCCTATCCTGCGACTTATTGTAGACTCATACCCTAGCCTGCCAAAACCGCGGCTGAGCGCAGTGGCAGGACGACGCACGTACACGGAAGACGAGCTGCAAGCGGCGCTGAGGGACATCCAGAGTGGCAAGTTGGGCACCCGCCGGGCCGCCGTCATCTACGGGATACCGCGGTCCACGCTGAGGAACAAGGTGTACAAGCTGGCAATGGAGCGGGAGCGGGACTCGCACCTCGTCAGCCCGGAGCAGGTTGCGGCAAAGGCGAGGGCTCTGCTTGGAGACAAGGATGATGATGACCAAGAAGATGATGACGACAAGGACTCCGGCGCAGAGGAGGAACGTGAAGTCGAGAAGGCTCTCATGAGGCCGATCATCTCAATCGAAGACTTTATCCGCCTCTCAAGTGAAAGTGGGGGGTTTCCAGGAACAGATTCCTTAAGAACGCTTCTACAACATGGAAGTAAAAGTTTgtcggagaaaaaagaagatgagtCGTCTTCTCCTCCTGTTTACCCGATGTTTCCTCCGCCTTTGTCCTCGGAACTTCTGaatggtttggatcattcagctTTGGGACCTTACATAAATCGTTTACTAGCCGCGAATCCCTTAGGACCCGTCAATCCCTTTGCGATGGGTGGTAGCAGAAACTCTCCTCCTCAAAGGAGCCCGACGGAACCGCAAGGTGACTTTGTGCCAAAATTCTCCCATCTCGAGTTAGTTCGGAGAATGATGTTAGAGGAAAGGCTAATGCAAGAGGATCAACAGAAAAAAGACAGAAGTTTCATTAACGGTTCGCGACTTGGGGAGCCTGGTCCATCTTCCAGCGTCACTCAGGATGATGAAACGTCCGGTTCGGGAACTCCTCCAAATGTGATATTAAGAATTCCGTCCTTCAAACCAGCCCCTAAAAACAGCCTAGGAGATCACACGGGATTTCCTTTGGGTGTAAAAATTGGGGAATCTAGTCAGCATTCGGTGATTTCTCCTCCAATAAGTGCTGGCAGAAGTGAATCTTCATCTCCCACTTCGATCGGGAAAGGTATTAGTGTAAGCTTAAAAGATGTAATTGCTAAAAGTATAAGTCAAAAGTTCCAACAGCCTGCGGACCTGCATCATCTTCCCCATACACCTCATGGTCTAGATCATTACAGAAGAGCAGATTTCTCTCAAGCACTAGGATGTAGTTCTCCTATAATGCGAAATCACAACAATAACCACGTTGATGAAAGAAAAATGCACCACACCCCGACTTCAAAACCTCCCACTAGTGGAACCAACACTGGAACAACAACGGGGGGGAAAGGGACTAGACCAAAACGAGGGAAATATAGAAATTATGACAGAGATAGTTTAGTTGAAGCTGTAAGGGCCGTTCAGAGAGGAGAAATGAGTGTACATAGGGCGGGCTCTTATTACGGTGTCCCGCATTCAACATTGGAGTACAAAGTTAAAGAAAGACATTTAATGAGACCGAGAAAAAGGGAGCCTAAATCGGTGCAAGAggaaataaaactaaaagaagaTCCTATCGCAGCTCGGATATCTCCTGCAATTGCTGCCCCCGATAAGTGTAAGCTGTTACCTCCTTCAAAACCACCTAAAACTCCATTCACGCCTCCAACTCCCCTTCCTACAGCTCCTAACGGCTTGAAGATGCCTCCTATGTTTGATCCTTCACTACCTTATAGTGCAACGCCTCCTTTTCCCTTCTGGCCTCCTAATCCTTTCCCACATATTCCGATGGAATATCCTAGAAATCCGAGTTTCCAACCGACTCCGGATCACTTCTTTGCATCTCAAATGATTCAAAGACTCCAGGAAGACTCAGCAAGGACACCTTTGAGTCCTCCACCAACCTTGGGTAAAACAGCACGAGAATTAGCTGAAACCCTCTACGACGGTACTGGTGCAAATGGAAGCTTTTTGGATGGAATAATCCGATCAAGCTTGGAGTCTGGATTGTCAGCGAAGGCGAAGGAGAAGGAGATGAAGCGCCCTGAAGACATGTCTAATAAAGCGTTATTGGACCAACTTTGTCGGAACAGTCGAATGACTCCACTTCCGAAGGCCGAGCCGAGTAGTTCCGACGAAGAAACATCCAAGAGAGCAGTCAATCAAAAAAGATCGAGTGAGGATGTTTCTCCCGGTCCTCAAGACTCTGGGAAAGGAGAAGTGAAGGATCGATTGTTCGACGACCCAGAATTGTCACCGCGAGCAGAGGTGAAAAAAGAGTCTGAAATTAATACAGACGATCCTAACTTAAAAACTGAACATGTCGATGAAAGTGCCTGTGATAGTAACCATACGATAAAAAGAGTAAAGCTAGAAGAAGAGACATAG
- Protein Sequence
- MYSYPSLRLIVDSYPSLRLDVDSYPILRLIVDSYPSLRLDVDSYPSLRLVVDSYPSLSLDVDSYPILRLIVDSYPSLPKPRLSAVAGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDSHLVSPEQVAAKARALLGDKDDDDQEDDDDKDSGAEEEREVEKALMRPIISIEDFIRLSSESGGFPGTDSLRTLLQHGSKSLSEKKEDESSSPPVYPMFPPPLSSELLNGLDHSALGPYINRLLAANPLGPVNPFAMGGSRNSPPQRSPTEPQGDFVPKFSHLELVRRMMLEERLMQEDQQKKDRSFINGSRLGEPGPSSSVTQDDETSGSGTPPNVILRIPSFKPAPKNSLGDHTGFPLGVKIGESSQHSVISPPISAGRSESSSPTSIGKGISVSLKDVIAKSISQKFQQPADLHHLPHTPHGLDHYRRADFSQALGCSSPIMRNHNNNHVDERKMHHTPTSKPPTSGTNTGTTTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKSVQEEIKLKEDPIAARISPAIAAPDKCKLLPPSKPPKTPFTPPTPLPTAPNGLKMPPMFDPSLPYSATPPFPFWPPNPFPHIPMEYPRNPSFQPTPDHFFASQMIQRLQEDSARTPLSPPPTLGKTARELAETLYDGTGANGSFLDGIIRSSLESGLSAKAKEKEMKRPEDMSNKALLDQLCRNSRMTPLPKAEPSSSDEETSKRAVNQKRSSEDVSPGPQDSGKGEVKDRLFDDPELSPRAEVKKESEINTDDPNLKTEHVDESACDSNHTIKRVKLEEET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00727251;
- 90% Identity
- -
- 80% Identity
- -