Amod013633.1
Basic Information
- Insect
- Allygus modestus
- Gene Symbol
- Arid5a
- Assembly
- GCA_963675035.1
- Location
- OY776111.1:150481357-150482076[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.3e-10 2e-06 30.7 0.1 30 64 20 54 18 55 0.94 2 3 3.7e-11 5.6e-07 32.5 0.1 31 65 54 88 53 108 0.85 3 3 8.7e-16 1.3e-11 47.4 0.1 31 85 116 168 102 170 0.91
Sequence Information
- Coding Sequence
- ATGACACTGTCACCTCCAGTAGATTGTGGAAGTATGTCTATGAAGAGATGGGTGGTGACCATGGATCTGTGGAAGTTGTACAGCAAGGTCCGTCACCTCGGTGGCTATGACACTGTCACCTCCAGTAGATTGTGGAAGTATGTCTATGAAGAGATGGGTGTGGATCTGTGGAAGTTGTATAGCAAGGTCCGTCACCTCGGTGGCTATGACACTGTCACCTCCCATAGATTGTGGAAGTATGTCTATGAAGAGATGGGTGGTGACCAGTATTGGATCTGTGGAAGTTGTACAGCAAGGTCCGTCACCTCGGTGGCTATGGTACTGTCACCTCCAGTAGACTGTGGAATGGATCTGTGGAAGTTGTACAGCAAGGTCCGTCACCTCGGTGGCTATGACACTGTCACCTCCAGTAGACTGTGGAAGTATGTCTATGAAGAGATGGGTGGTGACCAGTCCAGCACTAGTGCAGCCACTTGCTGTCGGCGACACTATGAGCGGTATATTATCTCTATATTGTAG
- Protein Sequence
- MTLSPPVDCGSMSMKRWVVTMDLWKLYSKVRHLGGYDTVTSSRLWKYVYEEMGVDLWKLYSKVRHLGGYDTVTSHRLWKYVYEEMGGDQYWICGSCTARSVTSVAMVLSPPVDCGMDLWKLYSKVRHLGGYDTVTSSRLWKYVYEEMGGDQSSTSAATCCRRHYERYIISIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -