Basic Information

Insect: Alloplasta piceator
Gene Symbol: -
Assembly: GCA_946863875.1
Location: OX333073.1:28091-31454[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 8.9e-07 0.00012 23.0 1.0 1 23 269 291 269 291 0.98

2 6 0.00035 0.046 14.9 0.3 1 23 297 319 297 319 0.98

3 6 0.00022 0.029 15.5 0.9 3 23 327 347 325 347 0.98

4 6 1.3e-08 1.7e-06 28.9 1.3 1 23 353 375 353 375 0.99

5 6 0.00042 0.056 14.6 6.4 1 23 386 408 386 408 0.96

6 6 1.7e-07 2.3e-05 25.3 1.3 1 23 413 435 413 435 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	8.9e-07	0.00012	23.0	1.0	1	23	269	291	269	291	0.98
2	6	0.00035	0.046	14.9	0.3	1	23	297	319	297	319	0.98
3	6	0.00022	0.029	15.5	0.9	3	23	327	347	325	347	0.98
4	6	1.3e-08	1.7e-06	28.9	1.3	1	23	353	375	353	375	0.99
5	6	0.00042	0.056	14.6	6.4	1	23	386	408	386	408	0.96
6	6	1.7e-07	2.3e-05	25.3	1.3	1	23	413	435	413	435	0.98

Sequence Information

Coding Sequence: ATGAAGACTTACAGTCGAAAGAAGGGCGACAGCAACAGTCCCAGCACAAATGTTATTATTCATCTCAACGAATTGTGCCGATTATGCCTGGCGAAGGAGGAAGAGATGGTGCCGATTTACGACGACGAAGCTATACCTCTGCCTCTTCGTATAATGGCATGCGTCAATCTCGAGGTCTGGGAGGAAGATGGTTTACCCAATATGATTTGCCATCCGTGCAAGTATCAGCTGGAAAAGTGTTATCAGTTCAAGAAGAAATGCGAAGCGGCGGATTCCAAACTGAGAAAACACATGAAGCTCATAAATCGCTTGACCGGCACGGACGATGACGCCAAACGTGTCGAGGGCGAAGACGACGATGTCGAAGAACCGACCGGCGGCGGTGGAAAATCTCGTCGGGTCAAACAATTGCTGGCCGATCTTGTCGCCACTAAGGGCGAAGCTAATCAGGGCGACGGCGATCCCATCGAAGTCACCGAAGAGGAACTCGTCGGTGGTTATATCTTGGGTATGGGCTCGGAGAATATCGAAATGGAGGATGCGATAACCGAGGGACCGTCGAACATAACGCTGATGCCGGCTGAGGAAAAAACGGCAAAAGCTCGCTGCACCATGCGAGGCACTCGAATAAAGCAGGAGCACGAGTCCGACGACGAATCCGAGGAGATACAGAGAGCGATAGCAAACGCCGAACGCAAAAACGTTTACATGATGGAACTTACGGGTAACAATACGGGACACGGAGAGCTTCAGTTACAGCCGATAACCGATTCCGTCGTTGGCGCGAACGAGGAACTCAAGGTATTCCAATGCGACAAGTGTCCCAAAGCTTTTACACGTCGAATAATGCTCAAGAGTCATCAATCGGTTCATTCCACTCAGCGTGGCTTCACTTGCCAGGCCTGCGAGAAATGGTTCCCAACGAGATCCGCTCTTGTTCGTCACGAGCGTACTCATACGGGCGAAAAACCATTCGGCTGCAACATCTGTCATCGGGCATTCGCGCAAAAGGAAATTTTGCTGCGTCACTTGATGACCCACTCGGGCCAAAAACCATTCCAATGTCAGGATTGCGAAAAGAGTTTTACCCAACGCGAGGCACTACGCGTGCACATGAGACGTCATCAGAAGCTCGATCCTAACGATATACAGTTGCATCATTGTCAATTATGTCCAAAGGCTTTCTGTCACGCTTCCGGTCTCAGCAGACATCTGGTTACTCACACCGGACGTACTTACAAGTGCGTGGAGTGCGAAAAAACCTTCACCGACAAGAGCTCGCTTCTCAGGCACAGCCGCATACACGCGCCCAAGAAGATGTAA
Protein Sequence: MKTYSRKKGDSNSPSTNVIIHLNELCRLCLAKEEEMVPIYDDEAIPLPLRIMACVNLEVWEEDGLPNMICHPCKYQLEKCYQFKKKCEAADSKLRKHMKLINRLTGTDDDAKRVEGEDDDVEEPTGGGGKSRRVKQLLADLVATKGEANQGDGDPIEVTEEELVGGYILGMGSENIEMEDAITEGPSNITLMPAEEKTAKARCTMRGTRIKQEHESDDESEEIQRAIANAERKNVYMMELTGNNTGHGELQLQPITDSVVGANEELKVFQCDKCPKAFTRRIMLKSHQSVHSTQRGFTCQACEKWFPTRSALVRHERTHTGEKPFGCNICHRAFAQKEILLRHLMTHSGQKPFQCQDCEKSFTQREALRVHMRRHQKLDPNDIQLHHCQLCPKAFCHASGLSRHLVTHTGRTYKCVECEKTFTDKSSLLRHSRIHAPKKM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00687415;
90% Identity: iTF_00059683;
80% Identity: -