Basic Information

Insect: Alloplasta piceator
Gene Symbol: RREB1
Assembly: GCA_946863875.1
Location: OX333071.1:73568954-73578098[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00084 0.11 13.7 0.0 1 23 60 82 60 82 0.98

2 16 0.00017 0.023 15.8 0.3 1 23 96 118 96 118 0.98

3 16 2.3e-07 3e-05 24.9 1.3 1 23 124 147 124 147 0.98

4 16 0.028 3.7 8.9 0.0 1 23 243 267 243 267 0.95

5 16 3.6 4.8e+02 2.2 2.8 2 23 273 295 273 295 0.91

6 16 9.5 1.3e+03 0.9 0.4 1 16 351 366 351 371 0.77

7 16 1.4 1.9e+02 3.5 0.1 1 23 486 508 486 508 0.96

8 16 2.9e-05 0.0038 18.3 0.3 1 23 517 539 517 539 0.98

9 16 0.0018 0.24 12.6 2.9 1 23 545 568 545 568 0.97

10 16 0.00046 0.061 14.5 3.0 1 23 979 1002 979 1002 0.97

11 16 0.00066 0.087 14.0 0.1 3 23 1299 1319 1297 1319 0.97

12 16 0.93 1.2e+02 4.1 6.5 1 23 1325 1348 1325 1348 0.97

13 16 0.019 2.5 9.4 1.8 1 23 1402 1426 1402 1426 0.95

14 16 1.1 1.4e+02 3.9 5.1 1 23 1568 1591 1568 1591 0.97

15 16 0.011 1.5 10.1 0.4 2 23 1643 1664 1642 1664 0.94

16 16 1.3 1.8e+02 3.6 8.2 1 23 1670 1692 1670 1692 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00084	0.11	13.7	0.0	1	23	60	82	60	82	0.98
2	16	0.00017	0.023	15.8	0.3	1	23	96	118	96	118	0.98
3	16	2.3e-07	3e-05	24.9	1.3	1	23	124	147	124	147	0.98
4	16	0.028	3.7	8.9	0.0	1	23	243	267	243	267	0.95
5	16	3.6	4.8e+02	2.2	2.8	2	23	273	295	273	295	0.91
6	16	9.5	1.3e+03	0.9	0.4	1	16	351	366	351	371	0.77
7	16	1.4	1.9e+02	3.5	0.1	1	23	486	508	486	508	0.96
8	16	2.9e-05	0.0038	18.3	0.3	1	23	517	539	517	539	0.98
9	16	0.0018	0.24	12.6	2.9	1	23	545	568	545	568	0.97
10	16	0.00046	0.061	14.5	3.0	1	23	979	1002	979	1002	0.97
11	16	0.00066	0.087	14.0	0.1	3	23	1299	1319	1297	1319	0.97
12	16	0.93	1.2e+02	4.1	6.5	1	23	1325	1348	1325	1348	0.97
13	16	0.019	2.5	9.4	1.8	1	23	1402	1426	1402	1426	0.95
14	16	1.1	1.4e+02	3.9	5.1	1	23	1568	1591	1568	1591	0.97
15	16	0.011	1.5	10.1	0.4	2	23	1643	1664	1642	1664	0.94
16	16	1.3	1.8e+02	3.6	8.2	1	23	1670	1692	1670	1692	0.98

Sequence Information

Coding Sequence: ATGGTCAGTGGTCAGACTAAGCTCGTAATGACGACAACGAAAGCAGCAACAACAGCAGCAGCAGGTGGAGGAGCGGGAACAGCACTATCTGAAAGCAGAACGAAACATCGTCACAGCAGTGATACACAGACAGATGCAGCATCATCGCCATTGACATCGGATCAACAGGACGCCGTTTATCCGTGCCCGGCCTGTCCAATAGTACTGACGACATCGCGGGATCTAACGAATCATCTGCGTGGTCACAATTCACCTCGGAGCACCGATTACAGTGGCGAGGACGATTATTCGTGCGGGGTTTGTCACAAGGTCCTGAGTTCAGCGAGCTCGTTGGATCGTCACGTTCTCGTGCACTCGGGCGAGCGTCCCTTCAAGTGTAAATACTGCGACATGGCGTTTACGACAAACGGCAACATGAACAGACATCTGAGAACGGCTCACGGTGGTTTGTCACCACGTGAGAACAGTTACACGGATTCGGAGGGTAGCAGCGATTCGGAAAAGCCAACGTCGAAGAGACGCCACGTCGAGGAATACAACAACAACGAGATAGCGAAGAGAAGCTCCCCCGATTTTATGGAACAGCATCGTGAATCACCGACATTCGTGGCAAAGAGAAAATGCCCTGATTACACGGACGACAATGAGAATCAGAGGAAGCACAAGATTCTCCTGGGAAACTCTAGAACCGAGATCAAAGCTGGCGTGATCGAGACGCAAAATATTTACAATTGTCCGGTCTGCGGTCGATTGGATTTCCCAACGAGCGCCCTTCTCGAGGCCCATCTCGAGAGGAATCATCCGGAATTTCCGGCCAAATGCGAACCGTGCAATCTATCATTCAAGAATCATCGTGTCCTGAACCTTCACAAATACATGAAACACATTGCCGACAGTGGGTATCCGAATAACGCGAGAAATCTGCGCAATTCGGTGGTGGGATTTCACGACTTGACATTCGTTGATTTCTCGTCGGACAAATTTCCAGCCATCGCACGAGCCGTGTGCGAACAATCGTTGCATCGACCGGCATCCGGTGAAATAGCAAAATTTCAATGTGGCAAGTGTCTTCGAGCATTTCCCTGCCGTTCGGCTCTGGATGGCCACGAGATGGATTGCGGTATGGCTCAGTCGCAATCGCGGGTCTACATGGACGATCAATCGAGGAGGGACGATTTTTTCGCGGGTCTAGATCTGCAGAACAAGGCGGCGATGAACGAAGCGAAGGAGGGCAAGGATCTCGCTGACATACAGAGCATCATATCAGTGACATCGGGACCGATATTGCAGAACTTTCCGCGTTCGGACGCGAGTACGCCTGAGCATCAGATAAAGATGGCACCGAATGTAGGTTCATCCGGTTCATCGGGTACACCATCGTCGGAGTATCATCAGGAGGAGGAGGCACAGGACGCGTTTGCCGCAGATTTTCGTAAAATGAAGCTCAAAGGTGAATTTCCGTGTCGCTTGTGCATCGCTGTATTTCCAAATTTACGAGCTCTCAAAGGACACAATCGTTCGCACATGGGCGTTGGACCTGGCATGCCCTATCCTTGCAACATGTGTCCTTACACGAGCACGGACAAAGCCACTCTCGTCAGGCATTTACGATCTCACAATGGTGATCGTCCCTTCGAGTGTTCGCTCTGTAATTATGCATTCACGACAAAGGCCAATTGCGAGAGGCACGTGAGAAATCGTCACGGTAAATTAACGCGAGAGGAGATCAAGAGCGTGCTCATTTATCATCCCAGCGAGGATTGCACGAACGACGGATCCTTGGATCGGAGTTCACCGCGTGGTGTCCGCGAGGATGCGCGAAAGAGTCTCGTTTATCCCACCGAGAGAGACGATTATCATCAACCGAATGTTTATTCGGGTATACCGACATTGGACAACAAGCATGACCTCGGCAATGTCTCGGACGATGGACGTTCGATGTCACTGCACGGTATGCAACTCGGACATTACGATAAGAATGATGTATTCGCGAGGAACCATCGTGGAGTTCATCCGCTGGAATTGAGTCAGAGAATGGACGACGACGGTGATAAATCGCGATCGGACCACGTCGCCAAGTCCGATTACAGTGGCAAACAGGAGGACGATATGGACTCGAGATCGTCGGACGATGATGAGAGCGTTTCCATGATCAGTGACAGTAAAATGGAGGGGATTCATCAGAGGGCCCAACAAGCGAGTCCCATTGATCTCAAGAGAAACCCATCGACGACAATGACGGGAACGAGAATCGTTGATGACGGTGGTGAAGTTTCAGCGACCGGGGACGATGCCCCGTTGGATCTGTCGATGGATGTGCTCGATTTGAGCAAAAAATCCAAAATAAACGGCAATAATCAAGCTGCCATTTCGCCCGGGACACCCGACGACATTGGCCGAAATCAGAAGGAATTTTACGACGCGACCAATCAATTTTTACTCACCCAGGCTCTATTGAAAGCCGGACAAACTGGTAATCCAGCGACCTCACTCGAAGCTCTCTACGCTAATGCCCACATGATATACCGTAATTTCGGTGGTTTTCCCGGTGCCGGTGTCGGCGCTGGTATTCTACCACCCTATTTGTTCAATCCTCACATGTTCGGCCAAGATTTCACGATGAAAGATCGTTTGCAGAAGGAATTGGTGAGGGGTTTGCAACTCACGAGCGGTGGTACACTCGTCGAACCACCGATCGGTAATACAGCGTTCACCGGTGCTTATCCACCGAGCAGAGACATACCGATTCATACGATGAGCGAGCAGAGCGATTATGCGAAGCTGATGTCATCGAAATTACCACCAAAAATGGTGAGTCCGCGGGAGAAAACGGATAACAACAATTCGCAATCGTCGAATTCCGTTAAAATGGTGATCAAGAACGGTGTACTTATGCCAAAGCAGAAACAACGACGTTACAGAACCGAGAGACCGTTCACGTGTGAGCATTGCTCGGCGAGATTCACCCTGAGAAGTAACATGGAGAGACACATAAAACAACAGCATCCTCAACACTGGAGTCAACGACCACGAGGTGGACACTCGACGAGGGGAAGACCACCGGCGAATCCACCGACGATGTTGCAGAGTGGCGCGAATCATCATACGAGCCAAAAATTGTCACAACCGTATCCGAGCATATTGCCAAAAGTTGGACAGTCATCGGGCTCGTTGAATTACGAGAAACACTCGATCTCCGATCAGGTCAAGTACGCGATTCTGGCTCAACAATTGAAGGGCAACAGTAAAGTCGAGGAGAACGACACGGAGGAAGAATTGGTGATCGACGAGGCAGCGCAAGAGCGTGAAATGGCAAATAACGAAGAGGACAAACGTCCGACGAGTTTGTTGCGTGGAAAACTCGAGGGTAGCAATTTGTACAAGGAGAATCGGCAGCCCAAAGGACCGGAAAATTTGAAAAAAATATCGCTCAAAGTGGAGGAAGATCGTGACAATGACGAGAAGACGAAGGACGAGGAGATTAATCGTGATGTTGAGGTCAAGATCGAGGCTGAAGAGGAGGAAAATGACGAGGATATGAAGGATTACGCTACGAGTGAACTTTGCGTTACGGAAATGTCGAAGACCGAGCAGCCGTCGCGAGACGCTGTGAGCGAGAGAACGGAGGATGGCAATGCCGATCTTGCGAGTGTCTCGGAATTATTGGACAATGCATCACAGCAGTATCAACAGTTTCAACCACAGTATATGAGCGACGAGGAAGGTCTAGTGGCATCGACTAGCGATTGCAATAATTCCGGTAGTGATGAAAAATCGGATTCCGTCAATTCCGCAAATTCGACGAATTCAACGTCATCGAAGAAGAAGAAGAAGAAAAAGAAGAAGATGAAGAAGAAAAAATCGGCATACTCGATGGCACCGAACAGAGTAATATGTCCATATTGCGAGAGACCATTCCCATGGACATCGTCCCTGAGACGACACATTCTCACGCACACCGGACAAAAGCCTTATCAGTGTATGCACTGCTCTCTCTTATTTACGACAAAATCCAATTGCGATCGTCACTTGCTCAGGAAACACAAGAACAACGCGAACAAGATTCGTCGTATGAGAAATTCTTCGTCACCAGAGGCTCAGGAACAACCGTCCAACAATAACAACAACAGTACCAACAACAATAACAACAATAACAGCAGTACGAGTAGCACTTTTGCAATGAGAAACGTACCCGAGAGACCCTACAAGTGTAATCTGTGTCCGAGCTCGACATTTTCGACATTGGGAAATTTGAAGAAGCACAAATCGTCGAAACACTCGAGAGGTGCAAAAACAAGACCGGAATCGCCGATAACGAGCGAACCGAGGAACAGCCCGATAACGTGCAACAAACAGAACGATCAGAGTGGCTACGAGAGTCAATCGTCCAGCGTCTCCGACAATGTCGAGCACACGGAAAATATAGAAAATACGGATAATAACGAGGCAACCCGAGTGGAAACGAGCGTTAAGATGGAAACGGACGAGAATAATGGATCAACGGAAACGCCTGAGATCGCCAAGAATCGAGAACCAGAACCGATGGAGTTATCGGAAAATGTCGATTGTACGATAGCGGACAATTCTAGCCTCGATAATACCCTGACCAAGCACAGCGAGAGTGGCGTTACAACGACGAACGATGCCGCAAAATCAAGACGACCATCGCCAAGATCGTCACCAGGTCCAACAGACGCCCCCTTCAAGTGTCATCTCTGCGACAGTGGATTCTCCGAACGTCACGATTGTCTCGAGCACATAAGAATAAATCACACGAGATCCTACGAGATACTCGTCGCCAAGGGTGCCCTTGACATGGACATCGAGGCCCCGGAGGAACAACAACAGCCAACCCCTTCGCTGCAGCATCACAGCGACGGCGAAGAGAAACGAGGCAGATTTCCCGACTACAGCAACAGAAAGGTTGTTTGTGCATTCTGCATGCGTCGTTTCTGGTCGGCGGAGGATCTCCGTCGTCACATGAGAACGCACACGGGTGAGAGGCCATTCTCGTGCGACATATGCTGTCGTCGTTTCACCCTGAAGCACAGTATGCTGCGTCATCGTAAGAAGCACGAATCGGTGGATTCAATGATGTACGTTGGTACGAGCGGCGACGAGGAATCGGCGCCGTCGCAGCCGCCGACGATAACGCCGCGCAGTCAGCAGACATCGTTGATAAGCACAACGAGCTGCGACTCTAGGATACAGGAGAGGCTATCATTGCCGACAGTGGCGACCGTGGCGACCGGCGACGCCGCGCCGAGTGGCCTGATGAGGTTCAATCCTTACGACAAACTGACGACGTTAACGGGCAAACTAGCGAACGCCCAGCAACATTTTAGCGTCGGGGAGGGTGGAATCGCCAGTGGGGACACGGAAAACGATCTCATCTCGAATTTACTTGGTATACGTGACAAGAGTATCATCGACAAGGTCCTGCAGGCATCGGCGGATGACGCGGCCAAGCTTTTGGGTGTAAATCGAAATCACGATTGA
Protein Sequence: MVSGQTKLVMTTTKAATTAAAGGGAGTALSESRTKHRHSSDTQTDAASSPLTSDQQDAVYPCPACPIVLTTSRDLTNHLRGHNSPRSTDYSGEDDYSCGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHGGLSPRENSYTDSEGSSDSEKPTSKRRHVEEYNNNEIAKRSSPDFMEQHRESPTFVAKRKCPDYTDDNENQRKHKILLGNSRTEIKAGVIETQNIYNCPVCGRLDFPTSALLEAHLERNHPEFPAKCEPCNLSFKNHRVLNLHKYMKHIADSGYPNNARNLRNSVVGFHDLTFVDFSSDKFPAIARAVCEQSLHRPASGEIAKFQCGKCLRAFPCRSALDGHEMDCGMAQSQSRVYMDDQSRRDDFFAGLDLQNKAAMNEAKEGKDLADIQSIISVTSGPILQNFPRSDASTPEHQIKMAPNVGSSGSSGTPSSEYHQEEEAQDAFAADFRKMKLKGEFPCRLCIAVFPNLRALKGHNRSHMGVGPGMPYPCNMCPYTSTDKATLVRHLRSHNGDRPFECSLCNYAFTTKANCERHVRNRHGKLTREEIKSVLIYHPSEDCTNDGSLDRSSPRGVREDARKSLVYPTERDDYHQPNVYSGIPTLDNKHDLGNVSDDGRSMSLHGMQLGHYDKNDVFARNHRGVHPLELSQRMDDDGDKSRSDHVAKSDYSGKQEDDMDSRSSDDDESVSMISDSKMEGIHQRAQQASPIDLKRNPSTTMTGTRIVDDGGEVSATGDDAPLDLSMDVLDLSKKSKINGNNQAAISPGTPDDIGRNQKEFYDATNQFLLTQALLKAGQTGNPATSLEALYANAHMIYRNFGGFPGAGVGAGILPPYLFNPHMFGQDFTMKDRLQKELVRGLQLTSGGTLVEPPIGNTAFTGAYPPSRDIPIHTMSEQSDYAKLMSSKLPPKMVSPREKTDNNNSQSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPANPPTMLQSGANHHTSQKLSQPYPSILPKVGQSSGSLNYEKHSISDQVKYAILAQQLKGNSKVEENDTEEELVIDEAAQEREMANNEEDKRPTSLLRGKLEGSNLYKENRQPKGPENLKKISLKVEEDRDNDEKTKDEEINRDVEVKIEAEEEENDEDMKDYATSELCVTEMSKTEQPSRDAVSERTEDGNADLASVSELLDNASQQYQQFQPQYMSDEEGLVASTSDCNNSGSDEKSDSVNSANSTNSTSSKKKKKKKKKMKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKNNANKIRRMRNSSSPEAQEQPSNNNNNSTNNNNNNNSSTSSTFAMRNVPERPYKCNLCPSSTFSTLGNLKKHKSSKHSRGAKTRPESPITSEPRNSPITCNKQNDQSGYESQSSSVSDNVEHTENIENTDNNEATRVETSVKMETDENNGSTETPEIAKNREPEPMELSENVDCTIADNSSLDNTLTKHSESGVTTTNDAAKSRRPSPRSSPGPTDAPFKCHLCDSGFSERHDCLEHIRINHTRSYEILVAKGALDMDIEAPEEQQQPTPSLQHHSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSMMYVGTSGDEESAPSQPPTITPRSQQTSLISTTSCDSRIQERLSLPTVATVATGDAAPSGLMRFNPYDKLTTLTGKLANAQQHFSVGEGGIASGDTENDLISNLLGIRDKSIIDKVLQASADDAAKLLGVNRNHD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -