Basic Information

Insect: Alloplasta piceator
Gene Symbol: -
Assembly: GCA_946863875.1
Location: OX333074.1:3801084-3803878[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.061 8 7.8 2.2 1 21 19 39 19 40 0.94

2 11 8.8e-06 0.0012 19.9 1.2 1 23 315 337 315 337 0.98

3 11 0.00018 0.024 15.8 0.6 1 23 347 369 347 369 0.95

4 11 3e-05 0.0039 18.2 0.4 1 23 375 397 375 397 0.98

5 11 0.032 4.3 8.7 3.2 1 23 402 425 402 426 0.96

6 11 0.014 1.8 9.8 5.4 1 20 431 450 431 453 0.95

7 11 0.0022 0.28 12.4 0.6 1 23 459 482 459 482 0.96

8 11 3.5e-06 0.00046 21.2 2.9 1 23 492 514 492 514 0.97

9 11 9.9e-06 0.0013 19.8 1.1 1 23 518 540 518 540 0.95

10 11 6e-06 0.00079 20.4 2.4 1 23 546 568 546 568 0.98

11 11 2.8e-06 0.00037 21.5 1.3 1 23 574 596 574 596 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.061	8	7.8	2.2	1	21	19	39	19	40	0.94
2	11	8.8e-06	0.0012	19.9	1.2	1	23	315	337	315	337	0.98
3	11	0.00018	0.024	15.8	0.6	1	23	347	369	347	369	0.95
4	11	3e-05	0.0039	18.2	0.4	1	23	375	397	375	397	0.98
5	11	0.032	4.3	8.7	3.2	1	23	402	425	402	426	0.96
6	11	0.014	1.8	9.8	5.4	1	20	431	450	431	453	0.95
7	11	0.0022	0.28	12.4	0.6	1	23	459	482	459	482	0.96
8	11	3.5e-06	0.00046	21.2	2.9	1	23	492	514	492	514	0.97
9	11	9.9e-06	0.0013	19.8	1.1	1	23	518	540	518	540	0.95
10	11	6e-06	0.00079	20.4	2.4	1	23	546	568	546	568	0.98
11	11	2.8e-06	0.00037	21.5	1.3	1	23	574	596	574	596	0.98

Sequence Information

Coding Sequence: ATGTCGATTTACGACCTCATGGATCATCTTTCGGGTCACCTCAACACGAGAAACTTCATCTGCGAGATATGCAGCAAGGATTGTTACAAGGAGACCTCGCTCTTGCATCACAAGCGAGTTTTTCAAGGTCAACTCAATCGTCCTCTGAAGAAGTTCAAGTGCGACAAGTACGTCACACCGGATCCTCTAGGGCCGGACTATCTCAGGGTTAAGATAATGGACGATTTCTATCGATTACCAAAGTCACAGTGCTACATGATGATGAATCAGCCAGGAAAGGAGGATAAAATGGAAAAGTCATTGAAACGTAACATTCGAATCGCACCAAAGGGAACGGAATATCGCAAAGAAATGTCATCGACCTTCGCTTACGTTCGATCCAGCGAAGTTCCGACGTCTTACGTCAAAGCGGAAATGTCAAGCGGATGTTACGTTAAATCGAGCGAATTCGGAGCTTACGTCAAAACCATTGATATTCCCTGCGTTTACGTTAAATCCAGCGAAATTCCTGGAGCTTACGTGAAAACGAGCGAGGCAACATCATCCCCCGAAACTTCGAAAATCGACGATAAATCTCTCGAAGGATCTGGCGTTTACGTTCAGTCCAGCGAAGTACCAATGGCTTACGTTCGTTTGCCAGGTGTGCCAAATATAAAAAAAGAATGCACCACGGATTCGGATCTCGAGATAACGCCGCGTGAAAAACGTACTCGCGCCGCGAGAATCCCATCAACGAAGAATGGAAAACCATCGAGGAAAAATTCCAAAAGGAAGAAAAGTCCCACTCGCGAGATGGACGAAAATTCGGATGACCTTGACAACGTTCCACTGGAGAATCGTGATATTTCTCAGAGGGAAGAGAACACTGAGAACGATGATGAAGTCTCAACGAACAAAGATTGCCCAAAGGAAAAGAAGAAGAAAAAAGTGGAATCAACGCCGTACGAATGCGAGCCTTGCGGTTACAAATTTTCGCGTAAATGGAAATACGAGAGACACATGAATACGCATACGAGGAAAAAGCCTGAACCCGTGAATTACGAGTGTGTTCCTTGCGCTCGTTCCTTCACGCGTCCTTCAACGtacaaacagcacatgctgaagcacagcacggaaaagccttacaaatgcacggtttgcgcgaaagcgtttaagcgcgcgtacgaggtgaagatgcatcaggaaattcacagcggttcgatgcacacttgtgacatatgcagTTTCACAACGGTCTACAAGGTTTCATTGATGGTGCACAAGCAGCGCGTTCATCATAAAAATTATCGTCAcaagtgcgatcagtgcgaaaaggcatttatgtcgaagcacgagctcgaggatcatcgaacttgtcatctcggtgagaagagtttcatatgcgaaatttgtggcaatggatttttgcagagaagctatctcgttcatcacaagcgggttgttcacggtgttcacaatcgtgcgccgatggaattcaagtgcgaatcctgcgacaagacattcgcgaccaagtactgtctgcagaatcacatgggagtgcatacccaaaaatttttgtgctcacaatgcggcaaagaatttgccactaattactccctcagaatgcacaatcgcatgcacaccggtgaacgtccccacaagtgcaatgtttgtgaaaaatcattttcacgctcgaatgcactttccgtgcacaaactcactcacacgggtcaaagaccctacatttgtgatatctgcgagaagagcttcactcagcgcacgacgatgatggctcatcgcaggaaacatcctggaagtcatccaccgcCACCGAGAACGTCACTTGTCGAGCTCGAAAAAGCAGCCGATTCGAATTCCTAA
Protein Sequence: MSIYDLMDHLSGHLNTRNFICEICSKDCYKETSLLHHKRVFQGQLNRPLKKFKCDKYVTPDPLGPDYLRVKIMDDFYRLPKSQCYMMMNQPGKEDKMEKSLKRNIRIAPKGTEYRKEMSSTFAYVRSSEVPTSYVKAEMSSGCYVKSSEFGAYVKTIDIPCVYVKSSEIPGAYVKTSEATSSPETSKIDDKSLEGSGVYVQSSEVPMAYVRLPGVPNIKKECTTDSDLEITPREKRTRAARIPSTKNGKPSRKNSKRKKSPTREMDENSDDLDNVPLENRDISQREENTENDDEVSTNKDCPKEKKKKKVESTPYECEPCGYKFSRKWKYERHMNTHTRKKPEPVNYECVPCARSFTRPSTYKQHMLKHSTEKPYKCTVCAKAFKRAYEVKMHQEIHSGSMHTCDICSFTTVYKVSLMVHKQRVHHKNYRHKCDQCEKAFMSKHELEDHRTCHLGEKSFICEICGNGFLQRSYLVHHKRVVHGVHNRAPMEFKCESCDKTFATKYCLQNHMGVHTQKFLCSQCGKEFATNYSLRMHNRMHTGERPHKCNVCEKSFSRSNALSVHKLTHTGQRPYICDICEKSFTQRTTMMAHRRKHPGSHPPPPRTSLVELEKAADSNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -