Apic003827.1
Basic Information
- Insect
- Alloplasta piceator
- Gene Symbol
- -
- Assembly
- GCA_946863875.1
- Location
- OX333071.1:67740856-67762178[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 7.2e-06 0.00095 20.2 1.0 1 23 237 259 237 259 0.98 2 31 0.0031 0.41 11.9 1.9 1 23 282 305 282 305 0.96 3 31 0.00023 0.03 15.4 0.5 2 23 312 334 311 334 0.96 4 31 0.00022 0.029 15.5 0.4 1 21 354 374 354 375 0.95 5 31 0.0021 0.28 12.4 0.1 2 23 472 493 471 493 0.95 6 31 0.21 28 6.1 0.2 2 23 500 522 499 522 0.88 7 31 0.00014 0.018 16.2 0.1 1 23 583 606 583 606 0.96 8 31 0.0072 0.95 10.7 0.6 1 23 612 635 612 635 0.96 9 31 0.17 22 6.4 1.9 1 23 648 670 648 670 0.97 10 31 4.7e-05 0.0061 17.6 0.3 3 23 715 736 714 736 0.96 11 31 0.068 8.9 7.7 1.2 2 23 799 822 798 822 0.92 12 31 6.5 8.5e+02 1.5 0.0 2 23 831 853 831 853 0.83 13 31 3.1 4.1e+02 2.4 0.4 2 23 860 882 859 882 0.91 14 31 1.5e-05 0.002 19.2 1.2 1 23 890 912 890 912 0.98 15 31 0.075 9.9 7.5 0.9 2 23 946 969 945 969 0.93 16 31 0.00024 0.032 15.4 3.3 1 23 972 995 972 995 0.97 17 31 0.021 2.8 9.3 0.5 2 23 1002 1024 1001 1024 0.95 18 31 0.0014 0.19 12.9 6.0 1 21 1052 1072 1052 1073 0.95 19 31 0.0031 0.41 11.9 1.8 2 23 1087 1108 1086 1109 0.93 20 31 0.15 20 6.6 1.1 1 23 1112 1135 1112 1135 0.95 21 31 0.0045 0.59 11.4 1.0 2 23 1142 1165 1141 1165 0.94 22 31 3.5 4.6e+02 2.3 0.2 2 23 1173 1195 1173 1195 0.94 23 31 4.2 5.5e+02 2.0 0.0 2 23 1202 1224 1201 1224 0.87 24 31 0.13 17 6.8 3.0 2 23 1233 1255 1233 1255 0.96 25 31 5.8 7.6e+02 1.6 1.0 2 23 1261 1283 1261 1283 0.90 26 31 0.13 17 6.8 0.5 1 23 1342 1365 1342 1365 0.95 27 31 1.1 1.5e+02 3.8 5.0 1 21 1393 1413 1393 1414 0.95 28 31 0.37 48 5.4 1.9 2 23 1523 1545 1522 1545 0.94 29 31 0.13 17 6.8 0.3 2 23 1552 1574 1551 1574 0.95 30 31 0.8 1.1e+02 4.3 2.5 1 23 1585 1607 1585 1607 0.97 31 31 0.031 4.1 8.7 0.1 3 20 1616 1633 1616 1635 0.95
Sequence Information
- Coding Sequence
- ATGGAGCCATCGAGGGAACGCTACAACGAGCTTTGCAGGCTTTGCGCCTCTTACGACGCCGTCAAAATGGATATATTCGGTAACGAGGGAAAGAATCGTCAGCTAGTCGACAAAATACAGACTTGTCTGCCCTTCAAAATCGCCGAGGATGATCGGCTGCCAAAATGTTTGTGCTACCGATGCATGTACAATCTTGAGAATTTTTACGACTTCAGAACGGCATGCGTGAATGCTGTGGCCCTTTTAGAAAGATGTCTACCACCGGGTAACAATGCCAAAGGCAGTGAGATCGAGAATGGAGCCGAAACTTATTCGGAATTCAGGACGGAGCTTTTCAAGGAGAAGGAAAAAATGCCTATCCTCATACCCGAGGCCCCCATAGTTAATCCAAACGCCGCTCTTGGGACACCGCCACGATTGAATTCGGACGGTGAGGCGGATCATGAAATCGAGGAGATTCACGAAATCAGCGGCATCGAGGAAGGTATTGTAAAAGAATCGGGGCTTGCAACGAACGCTGGCTTCGAGGACACCGAAGATCGTAAATCGGACGAGTATGAAATGGACATGGAGACTAATCCGAGTGATTTTCTTGAAATGACTGCAATGGTGACGGAAGAATTGGACGACGGCGAGACGAAAAAATCACAAATTCCAACGTCGAGGAACACAGAAATATTTCAGCACACTGCCGAGCAACACGAGGTATACGTTTGCTCCTTGTGCAACAAGGCTTTCAGCTCGAAGGGACATTTGTCGCTTCACGCGAGAATACACGTTGGCGCGGGTGACGTTATTGGTGCTAAAGTCGTTACCGACGATCACACATCGTACAAGAGACCTTATCAGTGTGATCTTTGCAATAAGTCTTATTCGACCGCGAAACATCGATGGGGACATGTATCAACGACTCACAGAGGTCATCCAGCAGTAACATGTGCCTACTGTTCACGAATATATTCAACTCGAACGAATCTCGAGGAGCACATAAAGTCACGTCATACGGGTTTACCGCCACCGCCGGAATTGCCAATTCCTTATGTACAGCCTGATAACAGATACAAGTGCAAAACGTGTCCAAAGATGTACACGAATGTCACGGATCTCAATAAGCACGGTAGAGTGTGCGTCGGTGGGCGTACGAAGGAAAAACCAAATAAGAAAATATCACCGAAGAGCAAGAGTCTAGTCGACACGTCGGATCTGTCGTCCACCGACACGGATTACGACGGCAAGGATTACAGAAATGCCGAAGCGAAACTTTCGAAAAATCCTCAATTGACGATACTCAAGCAGGCGCTGACAAAGGGCGAGGGCTTGAAGAGGGATCACGAGGATCGAAGCTTGTTGAACCATAAACCCGTTAAACGAACTAGGACCGAAAAAAACGAGATCTCGTCACTAAAGAGATGGTACTGCGAAATGTGCCCGAAGAATTTCACATCGGTCGAGAAACTTAAAGAGCACGAGATCGTTCACGATGCGGAAAGGCCCTTCATATGTATATTGTGCGAGAAGGATTTTGTTTTGAAAACATCGTTGAGCAGACACATCGTTTCGGCACACGGTGTCGATCCTACTCCCATTCTCGACAGTGACAAGTGCTTGAAGAAAACCGTCATGAACTCATCGTGGCGTAAAAAATTGATAAAACCGGAAAGGCGTAAGAATGCGAGAGATTTGACGGATTCATCGGAAGACGCTGAGAGCAGCTCGCACGGAAACGTCATAGAGATTGAGACGGTATTCGTCTGTGAGATATGCACTCGCGATTTCAACGATCGCGCCTCATTGTGGCTTCATATACGCGCAACCCACAAAGAATTTGCCGCTTTCGCTTGCGGCGTTTGTCTCAAGATATGCTCCAACAATGAGCAGCTTTTGAATCACGTTAATATGTATCACGGTGGTTCGAAACTTTTGGTCTCCGAGCAACGGCGTTATAGCTGCACGATATGCGGAAGGCAGCATGATTCTCGAAAAAAATTAATGACTCACGTTTCGATACACAATGTCGATCCGGGCTACGATCCGGCGAGCTTTGTTCAGCTGAATAGCAATTATTACAACGAAAATTTCAACAGCAACGAGGGCAACGAGCATCTCATGGATTTCGATATCGAGGAAGTCGAAAAAGTCGATTGTTACATTTGTTACAAATCATTCCCGAACGAGGATCAACTCATACGTCATCAACGAAACGCTCATAAGACCGAGCCTGTTATCCCGAGCGCTGATGTAACGGTGCAGAGCAACGGACCAGGCCCCGGTCAAAACGGCACCAAGGCACAATATCATTTGTTCTTTGTATGCGAATTGTGCGGAAGTTCACATCCGAGCAAGTGGGAACGCTGGCTCCACGTTAGCAGTAACCACAGCGACGATCCAACAATGAGATGCGAGCGAGACGACTGTGGCAAAATTTTTGCAACAAAAACATTGAAAAACGAGCACGCTCAGCATCATCTCATTCAAGGTTCATCACCAAATACTTGCGAAGTTTGTGGCAAATTATGGGGAAGTCGTGTCGACTATTGGAAGCACGTAATGGGCGTACATTCGGACACAGTGCCCTTGATATGCGGTGTCTGTCTCAAAGTCTTTCCCGACGTCGTGAAGCTCAGTTGCCACGTTAAAACGAACCATTGGCCACTGACAAACGGTGACTTCAGTTGCGACATTTGCGGACGGCCTTATTCGAACAAATCAAAGATGTCGCGACATCGTAAGATTCACGGTTTGGAAGTTGACAATATATTGAACAACGGAACATCCGAAGCATTGAACGACAATTCGACCAATGGGAAGAGCTTCGCCCAACCGGAAATTGAATTGACGTGCGAAGTTTGCACTGACATGAATTTCGATAATTGGGAAAGTTTGTGCAATCATCGACGAATGATTCACGGCTTGTTCCCGTGCGATTTGTGCAACAAGTGTTACGGTCGTACGTCACACTTGTGGAAGCACGTTAATCGCGTCCACAAAGGACACGCGGACGTGACTTGTCGCTATTGCATGAAAACAAGCGCCTCGAAGGATCATCTTGCGGCTCACATAGCGAAGATACATCGTTATGAGCCCGACAGTAAACTCGAGATACGAGAAACTCCGAGTAACGATAAACAAACGACCGTCGAGGACGAGGGTTCGCATCATTGTGACAAATGCAACAAGAGTTTTCACAAGCGTTATCTGTTGCGTCGTCACATGAAGGGTTGTCAAAATTACCGCAAAGATCCGGGTGCGCTGTTGACGCGTTGTCGCGCCTGCGAGAGAATATTCAAAGATCGCGCCAGTTTGCAAAAGCACATCGAGAATCATCACAGCGAGTACACTTGTCATCTTTGCAACGAGACCGTCACATCGAAACTCGGCATAATGACTCACAATCGCGTTAATCACATGGAACACCCGGATTTAACGTGTGAAAACGTTAATTGCAAGAAATTGTTCCGAACGAAGGAGGACCTCGAGTCGCATCGCAAGGATCACAAGTATCACAATTCGACGAATGTTTGTGACTTTTGCGGAGACACGGTCGAGAACAAGCTCAAATTGAAGATGCACGTGTTGTCGTTGCATCGAAACGAGATCGGCGTCTCGTGCGGTGTGTGTCTCATACCTATGAAGGATCCGAAGGACCTCAAGAAACACGTTGAGGACGAGCACGAGGGTGTTTTATTGAAACCAAATACATGTCAGGTTTGTGGCAAACGATACGCTTCAAAGTGGAAAGCCTTTGATCATACGAAAAAGTGTCACGGCAAAGTTTTTCGTACCTGCAAACAGTGCCTCGCTGTATTCACAACGGACACCGACATACGTTATCATTACGAGCACATACACAATGTCACGAAAGATCAGCTCGCTGGTTTTGAGAAACGCCTGGAAATGAGACCGGAGGATTGTGATACTAACGATATAATCGTCAAAGACGAACCCGACGAGTACGATTATGATTACGGTATCTACGACGAGGACGTTCACGATTATAAGAAACGACGAAGGGACAATGACACGCACGATTGTGAAATGTGTCCCGAGATATTTCTCAATCGCGAAACCCTGTCGGATCATTATAGGAACGTTCACAATACAGATCCTCAAACGATGTACAAGAAGGTCAAACTGGAGGGTACCAGCTCCAAAAGAAAGATGCGCGTGAGAGAAAATTTCGAGTGCAAAAATTGCTGTCGACAATTTTGCACCAAAACGCTGTTTTGGAATCACATCAACGTTTGCACGAGACGCAGCAGCAGTAGCAACAGCAACGCCATCAGCAGAGACGAGAATACACGAACGGGATATCCGACGTCGATACTCGAGGCTCATCTTAAGAATAACAACAAGATCAAGAAGGAGCCGGGCTTGGAAGCGAGTATGAACGAGACCAATTTGAATATACCGGATTTCAATCTCTTCGAGGACATCAACATGCAACTTTCCGAGCAAAAACCCGTACCGAATCTCATGCCACTGTCACAATTGCGACTAATGTCGAGTATGAAGTGTTCGAGAAAGGACTCGCGGAAGGTATACGACGAATTGACGAATACCGAGTGTACGTGCGAGGTATGCGGCAAACAGTGGCCAGCCAAGAAGCATCTTTGGCAGCATCTCATACGTTTTCATCGTGCCGAGGCCGCCGTTACCTGCGGCGTTTGTCTCAAATTGTGCACGACTTACGACGAATTGGCGGAACATCTTCGAGCGAGCCACGAATCGATATTGACCTGCGAGGGTAACAATTTCACTTGTAAAACGTGCGGTCGTTATCACAATGCGAGAAGCAAACTTCTGCTTCACATGAGTATTCACATAAACAGCAACGGTATCGCATGGTGTCAAGGATGCGAGAAGAGCTTTGAGAGCGAGGAAAAGCTCAATGAACATACGGCCAACTGCGACAAGAAACAACCAGTTTTTGAGGACCACAGTATTGATATCGACATGGATCATGAGATTAAGCTCGAAGATGACGACAAGGGAAGTCTAATAGGTGATGGTGCATCGCTTATTGGCGACGGCGACGAAGAGTTGGAAGAGGAGGAGGAGGACGTCGATTATTCTGATCACAGGGTTGGCGCTGTTAGCAATTCGGAAAACACAGAGGATTCGGAAAGCAGTAGTGATAGTTCGAGTAGCGGAAGCGAGGATGAAGAAAATGAGGTTGAGGAGATTGAATCGCGTACCCAAAGTCGGGCGACGGGTGAAGCTGTTAGTTGTGCCTCGGAGACTGACGACGAACGGGATATGAACGTCAGTGAAGAAATTTCCTCTGCCGAGAAAGTTGTGAAAAAGGAGAACGAGACTGACAATGCAATGGAGAGCGTTCATGAAGGAACGAGGAATATCAAGACAGAAGAGAACGAAAATCGAGGGGATAGCGACGAAAAAATTCAAAATCTTGACCCTGCGGAAAATACTAAGAAGAATACTGATCGATCGGTAGAAGGAACGAAAATATGCTCCCGAGGAGTCGGTGATGAGTCCGACGATGATGACGGGCCGCCTATTTTGAGTCCGATGATGCCGCTGCCGATCGAGAACATCAACGAGGAACAAGACGATGCGATTGGGCACAAGCTCAGTCCAATGGTGCCGTTGATGATTAAGGAGGAAACTAAAATAAAGGATGAGGCTACCAGACTCAACGATATGGTCGAAGAACTGGACAAAGTCGATAATTCGATGCCAAATAACGACCAATATTACGAGTACGAAGATTCCGCGGAACGTTCCAACGCGAGCATCGTCGCCTCGAACGAGGAGGAGATTGAATCGGAGGAAGAGGCCGAAGAAGAAATGGTCGAGGATGAGAACGACGAGTTGGACGATGAGGACAGCCGAATACACGTTGTTAATCCGAACGATGAGTATCATTCTGATGACAGTGGTGGAGAATCTGAAAACGAGGAGCAAGAAGAGGAGGAAGAGGGGGATGAGGAGGAAGAAGAAATGGAAGAGGCCGAAGGAGAGGAGACTTTCGAGGAAAATGTAGAAATGGACGCGGAAGATGGAGAGATAGAGGAAACCTTGGAAATCGAGGTTGACGGAGAAGAGAATGAGGAGGAAGAAGAAGAAGAGGACCAAGAAGAAGAGGCAGAAGCGGACGAAGAGCAGCAAATCGGCGAAGAGGATGATGGGCAAACGTGCGAGATCGATGAGGAGCATATCGACGATGGCGAAACATTACAGCTGCACAATTTGGGTGGAACGGTACTCATGGTGGCAAATGACGCGGACGGTAATCAAATATTGATTCAAAAAAATGTATCTGACATTGAGAACGATGATTCGATCAGTGCGGTGACCGGATACATCTACGAGGACGATGAATACGATTTTACGGGATTCCAAGTGGAGCAGGAGGATGAAGACGGAGCGGAAGAGGAGTGTGTGGAAGATGAAGGTGCCGAGCAAGAGACACAAGAAGAGGGTGTGGAAGAGGAAGGTGTCGAGCAAGAGACACAAGAAGAGGGCGTGGAAGAGGAAGGTGTCGATCAAGAGACACAAGAAAATGACAAGGAGACACAGAACGATGATGACGGTGACGGAGAGTTGACCGAACACGAGGAGGAAACGGAACAAGTGAACGAGGAGGAGGCGGAACAAGTGAACGAGGAAGACGATAATGGTGATTTGCATGATTCGAATACGAGTGCCAAATGCGATGTGTCAAGAACGTAG
- Protein Sequence
- MEPSRERYNELCRLCASYDAVKMDIFGNEGKNRQLVDKIQTCLPFKIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLPPGNNAKGSEIENGAETYSEFRTELFKEKEKMPILIPEAPIVNPNAALGTPPRLNSDGEADHEIEEIHEISGIEEGIVKESGLATNAGFEDTEDRKSDEYEMDMETNPSDFLEMTAMVTEELDDGETKKSQIPTSRNTEIFQHTAEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGAKVVTDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCAYCSRIYSTRTNLEEHIKSRHTGLPPPPELPIPYVQPDNRYKCKTCPKMYTNVTDLNKHGRVCVGGRTKEKPNKKISPKSKSLVDTSDLSSTDTDYDGKDYRNAEAKLSKNPQLTILKQALTKGEGLKRDHEDRSLLNHKPVKRTRTEKNEISSLKRWYCEMCPKNFTSVEKLKEHEIVHDAERPFICILCEKDFVLKTSLSRHIVSAHGVDPTPILDSDKCLKKTVMNSSWRKKLIKPERRKNARDLTDSSEDAESSSHGNVIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSNNEQLLNHVNMYHGGSKLLVSEQRRYSCTICGRQHDSRKKLMTHVSIHNVDPGYDPASFVQLNSNYYNENFNSNEGNEHLMDFDIEEVEKVDCYICYKSFPNEDQLIRHQRNAHKTEPVIPSADVTVQSNGPGPGQNGTKAQYHLFFVCELCGSSHPSKWERWLHVSSNHSDDPTMRCERDDCGKIFATKTLKNEHAQHHLIQGSSPNTCEVCGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVVKLSCHVKTNHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLEVDNILNNGTSEALNDNSTNGKSFAQPEIELTCEVCTDMNFDNWESLCNHRRMIHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHADVTCRYCMKTSASKDHLAAHIAKIHRYEPDSKLEIRETPSNDKQTTVEDEGSHHCDKCNKSFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSEYTCHLCNETVTSKLGIMTHNRVNHMEHPDLTCENVNCKKLFRTKEDLESHRKDHKYHNSTNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDEHEGVLLKPNTCQVCGKRYASKWKAFDHTKKCHGKVFRTCKQCLAVFTTDTDIRYHYEHIHNVTKDQLAGFEKRLEMRPEDCDTNDIIVKDEPDEYDYDYGIYDEDVHDYKKRRRDNDTHDCEMCPEIFLNRETLSDHYRNVHNTDPQTMYKKVKLEGTSSKRKMRVRENFECKNCCRQFCTKTLFWNHINVCTRRSSSSNSNAISRDENTRTGYPTSILEAHLKNNNKIKKEPGLEASMNETNLNIPDFNLFEDINMQLSEQKPVPNLMPLSQLRLMSSMKCSRKDSRKVYDELTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCTTYDELAEHLRASHESILTCEGNNFTCKTCGRYHNARSKLLLHMSIHINSNGIAWCQGCEKSFESEEKLNEHTANCDKKQPVFEDHSIDIDMDHEIKLEDDDKGSLIGDGASLIGDGDEELEEEEEDVDYSDHRVGAVSNSENTEDSESSSDSSSSGSEDEENEVEEIESRTQSRATGEAVSCASETDDERDMNVSEEISSAEKVVKKENETDNAMESVHEGTRNIKTEENENRGDSDEKIQNLDPAENTKKNTDRSVEGTKICSRGVGDESDDDDGPPILSPMMPLPIENINEEQDDAIGHKLSPMVPLMIKEETKIKDEATRLNDMVEELDKVDNSMPNNDQYYEYEDSAERSNASIVASNEEEIESEEEAEEEMVEDENDELDDEDSRIHVVNPNDEYHSDDSGGESENEEQEEEEEGDEEEEEMEEAEGEETFEENVEMDAEDGEIEETLEIEVDGEENEEEEEEEDQEEEAEADEEQQIGEEDDGQTCEIDEEHIDDGETLQLHNLGGTVLMVANDADGNQILIQKNVSDIENDDSISAVTGYIYEDDEYDFTGFQVEQEDEDGAEEECVEDEGAEQETQEEGVEEEGVEQETQEEGVEEEGVDQETQENDKETQNDDDGDGELTEHEEETEQVNEEEAEQVNEEDDNGDLHDSNTSAKCDVSRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -