Apic026131.1
Basic Information
- Insect
- Alloplasta piceator
- Gene Symbol
- Sry-delta
- Assembly
- GCA_946863875.1
- Location
- OX333080.1:2163625-2166145[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-10 1.9e-07 31.4 0.0 1 41 43 82 43 85 0.92
Sequence Information
- Coding Sequence
- ATGTTGAAGCCGAGTGTTTTTCGTGGTCGTTTTTGGCGAAAGAGACATTCGGGAAGAAACATTTTTCTGACAATTGACTACTTTTTGTGGCCCGGACAACGCATGAGATACGGCACTTATCCCGAAGATCCGGATCTCATGAGACGCGCGATGGACGCTGTGAAGAACGGATTGTCATTGAGAAAAGCCGCCGCTCAATTTTCCGTTACAAAATCCAGTCTTCATCGTTACATACGACACGATACGAGATTGATGGGAATAATAAATTCGCAGCAGAGGACGACTTACACGTGCAAAaattgtggcaagatctacaactactattcgagcttggcgagacatttgaagcacgagtgcggtgtcgagccgaaatttctttgtcccctctgtccttacagaacaaagcacaaatcGAGTCTCAATACGCATCTGAATGGAAGACACATGAAGATCAATAATTTTTATTCGATGCAAAACTGTGGCAACAATAATCCAACGTTCGATCAGAATCATTGGGGCAGAAACGGACCGGAAATAATACGCGAGATCGATACTCGTAGGTTTCACTGTCCGACCTGCGCGAGATCATTCGACTTCGATCAGTGGCAGAAGCATCAGTTGAGGGATTGCAAGAGACCGGCAACCAGGAATTGTCCTCACTGTCCTCACTATAAGAGCAAGAAATTGTATAACTTGCGCAGGCACATATTGCACATTCACGGTCACATGCTATAA
- Protein Sequence
- MLKPSVFRGRFWRKRHSGRNIFLTIDYFLWPGQRMRYGTYPEDPDLMRRAMDAVKNGLSLRKAAAQFSVTKSSLHRYIRHDTRLMGIINSQQRTTYTCKNCGKIYNYYSSLARHLKHECGVEPKFLCPLCPYRTKHKSSLNTHLNGRHMKINNFYSMQNCGNNNPTFDQNHWGRNGPEIIREIDTRRFHCPTCARSFDFDQWQKHQLRDCKRPATRNCPHCPHYKSKKLYNLRRHILHIHGHML
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00051369;
- 90% Identity
- iTF_00051369;
- 80% Identity
- iTF_00051369;