Apic006045.1
Basic Information
- Insect
- Alloplasta piceator
- Gene Symbol
- lolal
- Assembly
- GCA_946863875.1
- Location
- OX333072.1:39903366-39910232[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2 6.8e+03 -2.4 0.1 6 14 210 218 209 221 0.79 2 2 5.6e-15 6.1e-12 45.8 0.0 1 45 359 403 359 403 0.97
Sequence Information
- Coding Sequence
- ATGGGTACCCCgtcggatcagcattatcacctgaggtggaacaatcatcggtcaaattttgtcgaggttttcgatcaattgttggaaaatgagatattcaccgatgtgacattggcggttgacggtggtgaatttgtaaaatgtcacaaaatggtacttgccgcatgttcaccgtacttcaaggccctattcacggaattaccgtgcacccatcctatagttgttctcaaagacgtcaagtgccgagagatgaaagcggtattggaatacatgtacacgggggaggtgaaagtcacgcaggccaatttaccggctctattcaaagtcgccgaaatcctcaaagtcaagggtctcgttgCGAGTGAAACGTCGACATCCTTGGACGCCGAGCAGCGTAACGAGGAAGCGATAAGTACGAGCACAACGAGCGCTGGTATTTCGCGAAATTTCGAAAACACGAATAACAGTAGTGGGCAATCATCACCACCGCACTCGACAAGCTCACCATATTACGGTTACGGTAAATCACCAACGGCCCGTAATCAAGAACCTAAACTCCCGTTGCCCATGTGCTGGGCACTATCGCAAGCTCTTTCACTGCAGCATACATCAGCCGATTCGGCAGCGGCAGCGGCCATTCAATCGGTCAGACAACACTCAATGTTCTCGCCGCATTACGATAATCCAACGACCGAACAAGCAACAACCACTCACAGCCGTAAAAACAAAATAACGAGCAACAACATGATGAGAAATCATGATACGCCGATATTGAGAAACGTACTTGGACAGGGTCACGTTGACAGCTCAATATCGCATCTTCAGCAACAGACCGATCCTCACGAGATGCATTATCGTAGTACCAGCAATGGTTCGGCAAACAACGAGAGTGACGATAGACGCAGCAGTATGAATACACCTAATTGTCCACCGGCTCACAGTCCATACCCCACTGACACGTCGATGATGGAGGACGACGAGAAAAAAAATTCACCACAGTCTTATGCTGATGACGCGAAAGCAGCAAATTACGGGCCATCTCAGAAACCCGAATGGAAGCGTTACAAGCAGTACACGAGGGAGGATATTGCGAACGCGATCGAGGCCGTTAGATGTGGAATGAGTGCGCTTCAAGCTGCCAGAAAATTCGGCGTACCATCGAGAACCCTTTACGACAAAGTGAAGAAACTCGGTATCACGACTTCGAGACCATTCAGACGAAGCGCAAATGGCAGCGGCGCTTGTTTTCCATATGGCGTCGGTGGCAACATTAACGGAAGTATTTACGGAACTATCTCGGAGAGCGAGAATGAGAACAGTAATGTCCTCGTTGACAATCCGGCATCGTTGCTCGAGACCACATTTGTCGAGAGTCGGGACAACTCAAGAGATCGCGAATCAATTATGGAACTGGCTCGAAGAAGTTCAAGTCCTCAACCATTGTCCTTGTACTCGCATCGGCAAATAACGAACGAGGAGCCATTGCCACCATCACAGCAACAACAACAAGAACAACATCGAGAACATCAACAACCGATGGATGACAGCGAAGATAACGAGGTCGAGGATCTCTCGGTGAGCCGTAGACCCGAAGTTGGAGTTATAATGTCACCGAGTATCACGATTAAAGAAGAGCATTAG
- Protein Sequence
- MGTPSDQHYHLRWNNHRSNFVEVFDQLLENEIFTDVTLAVDGGEFVKCHKMVLAACSPYFKALFTELPCTHPIVVLKDVKCREMKAVLEYMYTGEVKVTQANLPALFKVAEILKVKGLVASETSTSLDAEQRNEEAISTSTTSAGISRNFENTNNSSGQSSPPHSTSSPYYGYGKSPTARNQEPKLPLPMCWALSQALSLQHTSADSAAAAAIQSVRQHSMFSPHYDNPTTEQATTTHSRKNKITSNNMMRNHDTPILRNVLGQGHVDSSISHLQQQTDPHEMHYRSTSNGSANNESDDRRSSMNTPNCPPAHSPYPTDTSMMEDDEKKNSPQSYADDAKAANYGPSQKPEWKRYKQYTREDIANAIEAVRCGMSALQAARKFGVPSRTLYDKVKKLGITTSRPFRRSANGSGACFPYGVGGNINGSIYGTISESENENSNVLVDNPASLLETTFVESRDNSRDRESIMELARRSSSPQPLSLYSHRQITNEEPLPPSQQQQQEQHREHQQPMDDSEDNEVEDLSVSRRPEVGVIMSPSITIKEEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00051115;
- 90% Identity
- iTF_00051115;
- 80% Identity
- iTF_00051115;