Apic011579.1
Basic Information
- Insect
- Alloplasta piceator
- Gene Symbol
- lov
- Assembly
- GCA_946863875.1
- Location
- OX333074.1:19429251-19436710[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.3e-16 6.9e-13 48.8 0.0 1 44 565 608 565 609 0.95
Sequence Information
- Coding Sequence
- ATGTCGAGCACGGCGGACAGTCCCGATGCAACGATGGCGCTGCAGTCACATTATTCATTAAGATGGAACAATCATCAGACCCACATATTGCAAGCTTTCGAGGCACTGTTGCACGCCGAGATTCTCGTCGATGTCACACTCGTGTGCTCGGAAACGAGCATAAGAGCACACAAAGTCGTTCTAAGTGCCTGCAGTCCATTCTTCGAGAGGATATTCGCGGAGCATCCATGTAAGCATCCTGTAATCGTGCTGAAGGATTTTCCGGGACGAGAGGTAGCGGCGCTGGTCGATTTCATGTATCGCGGTGAGGTACGTGTTGGTCGTGAAGAATTACCGGGTCTGATGAGAGCGGCCGAGAGTCTGCAGATCCGTGGACTCGCGACATCCGAGCCAAGACCGGCGAGTCCACCGGAAACACCGACGACCGATTTGTTGGGTGAACCATCGACGCCAGAGGGTGCAAGACAGGGTAGTCCAATGGACGACGATAATCTCGAGACAACAGCGACACGAATAGACTCGCGGGGTGGTATCATACAGCGTGACAATCGTTTGCCGCACATGGGACATTTAAATTTTTCGGTGCGGGATCTTCGTGAATTGTGCGGTTCGCCTCTAATGCCAAGGAGAAAACAGGCGAGACCGAGAAGAAGATCGGGCGAGCTGGTGGCGCAAGATTTGAGCAGACCTCAGCCACCACCGAGCCTAAGTCCACCGAGCGGATTGAATTTGGCTGGCGCGAGACAAGACAGGCACTCGTCACCTTCGTCTTTATCCGCCACGTTACGCCCACCAAGTGCAaacataaacaacaataccagtagcagcatcaacaacaagaacaacaataacaataacaataacaacaatgatattcatcagaatgagcaaCAGGACGACGAAATTGCCGAGAATCTCTCGCTCAAGAGACCCCAAACGCCATCGCCATTGTCGGATCATCAGAGTGGCCAGAGCATAAAGATCAAGCGCGAACGTACGAGCAGTCCCCGTTTATCGCCCCTAACGGATCATCGATTGGGACATCACTCGGACGTTAATCTTCATGAGCTTCCCATGGGTGGTAATACGGGGATCGCGGGGTTGTCGCTGACACCGCCGCATCATCACAGTGAGTACCTGACGAGCCTCGGCCAATTCGCGGCCCAGTGGTTACCGAATCCCAATCATATGAGCAACCAACCGTCGTCGCACTTATCACGGGACGAGAGTCCACACGGTCGAAGTCAACACAATCATTATCAGCCGCAGCAACAACAGCCACAACAGCAGCAGCACCAACAGAGGGAACAGTCTCAGCAGTGCCGTGAACAACAGGAACAGCAGCAGAGACAGGAGCAAGAATCGTCGTTGTCGTCGATAAGATCGGTCGCGGTATTCCCAATGGACGGTATGTCACCGGTTGGCGGTGCGGTAAGTCTGTTTCCGCACGCCGGTCGCGGCTCATTGCTCGCCGATCTTCACGACAGTTTCAAGCCCGAGGCACTTCACGGTCTATTCGGTGGTGGTAGTCTCGGGCATCACCAACATCATCATCCGGTGAAGAAAACGAAGAAACATCGGAGCGAGAGCTCGAGCGCGCGTCGATGGGCCGATCATGGGAGAGGGGGAATGCCGATCGGCAGGCCAAAGGGTCAGCACAGCGCCCCACGTGGTGGACCACCAAGATCTTGGACCAATGCCGAACTCACGATAGCGCTGCAGCACGTATGGAACAAACAAATGACGACTTCGCAGGCAAGCCGTATGTTCGGTATACCTTACAACAGTCTGCTGATGTACGTGAGGGGAAAATACGGCAAGAGTCTTAAACTCGAAGAATTGAGAAGGGACTGCACCGGTGCGACGACCGGCGAAGTTATGAACTCGTTGAATAACAATGTTAAAGCGATACAGGGAACGGGACAATTGGGTCATCCACTCGCTGGACTTTCGCATCCCAACGATGACGGTAATTTTGCCCATCATCCGCTACTGAGTGGCAATCTGCCGCAGGGTTTTTTTCCCGATTACAGCGCTGCCTTTCCCGTACCCGTTTCAATGGTCCATCTATTGCCACCCAGTGAACAAAAAGTTCTCGACGCGTCAACGACGAATTCATCGATCGGCGGTGGACTCGGCGGCAATTGTCCGCCGATCATGGTCGGTTGCCCGTCCGTAAGTCCACCCGGTGTCGACGGTGATATCGCGCACAGAAGTCGAACACCAACGCCAACGGACAATAATCATAATCACGAGACCACGGAATCATTGTCCTCGTCGATGACACCACAAGCACCCCAGTCCGCACCACCGTTGTTACAACAAAATGGCTCGGATTGA
- Protein Sequence
- MSSTADSPDATMALQSHYSLRWNNHQTHILQAFEALLHAEILVDVTLVCSETSIRAHKVVLSACSPFFERIFAEHPCKHPVIVLKDFPGREVAALVDFMYRGEVRVGREELPGLMRAAESLQIRGLATSEPRPASPPETPTTDLLGEPSTPEGARQGSPMDDDNLETTATRIDSRGGIIQRDNRLPHMGHLNFSVRDLRELCGSPLMPRRKQARPRRRSGELVAQDLSRPQPPPSLSPPSGLNLAGARQDRHSSPSSLSATLRPPSANINNNTSSSINNKNNNNNNNNNNDIHQNEQQDDEIAENLSLKRPQTPSPLSDHQSGQSIKIKRERTSSPRLSPLTDHRLGHHSDVNLHELPMGGNTGIAGLSLTPPHHHSEYLTSLGQFAAQWLPNPNHMSNQPSSHLSRDESPHGRSQHNHYQPQQQQPQQQQHQQREQSQQCREQQEQQQRQEQESSLSSIRSVAVFPMDGMSPVGGAVSLFPHAGRGSLLADLHDSFKPEALHGLFGGGSLGHHQHHHPVKKTKKHRSESSSARRWADHGRGGMPIGRPKGQHSAPRGGPPRSWTNAELTIALQHVWNKQMTTSQASRMFGIPYNSLLMYVRGKYGKSLKLEELRRDCTGATTGEVMNSLNNNVKAIQGTGQLGHPLAGLSHPNDDGNFAHHPLLSGNLPQGFFPDYSAAFPVPVSMVHLLPPSEQKVLDASTTNSSIGGGLGGNCPPIMVGCPSVSPPGVDGDIAHRSRTPTPTDNNHNHETTESLSSSMTPQAPQSAPPLLQQNGSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00051134;
- 90% Identity
- iTF_00051134;
- 80% Identity
- iTF_00051134;