Apic003652.1
Basic Information
- Insect
- Alloplasta piceator
- Gene Symbol
- ttk_1
- Assembly
- GCA_946863875.1
- Location
- OX333071.1:63506235-63519962[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-16 3.8e-13 49.6 0.0 2 42 429 470 428 473 0.94 2 2 5.2 5.7e+03 -2.2 0.0 30 42 473 486 472 487 0.81
Sequence Information
- Coding Sequence
- ATGTCTATGCaacagttctgtttacgatggaacaatcatcagccaaatttcatatccgtcttctcgtcgctgctgaacaatgagactctggtggacgttactttggccgccgagggtcgtcatcttcaagctcacaaagtcgtactatcggcgtgcagcacatactttcagtccctcttcaccgtcaatccctgtcagcatcctatcgtcattctcaaagatgtcaaattctccgatctcaagatcatggttgatttcatgtattacggcgaagtcaatgtttcccaggatcaattgccTTCGATAATCAAGACTGCGGAAAGCTTGAAGATCAAGGGCCTGGCGGAGATGCACACAGCCTCTCCGACAAAGTGGCCAAGTGGAAATAGCGAAGTTGGTGGTGGAGATCGTGGCGAGTCCTGTTCACCGAGTCCATCGCCCTTGTCGCCGTCCTTTCGCAGAAAGCGCTTGCGAAAGACCTCAACGGGATCGGCATCCGGTGGCTCAGCCGACAAAACCGAGGAAATAAACGAGATCACTTTAGTTGCCACAAATATCGTTAAACCCGAGCCGCATATTGTACCGCAAGAGGGCGGTATAAATCTTCGGCGTCCCATGAACGCCACGACCGATACACAAGGCAGCATTGACGAGGATCAAATATCCATTATGAGCAACATGGAAAGTAGTACGACGACGACACCAGCCCAGAGTGAAGGTTCCTTGCAAGAAGTGAGTCACCAATCTGGTGGAAATATCGGCCAGAGTTCCGTCGGTTCTCAGCCACCAGCCCACCAAGGATTGCAATGGACAATAATGGAGCATACGTATCCTCGTTTCGCTCTGTCCTCGTGTCAAACGAATCTGTCGGTCCAAGCGTCGTCGGCATTCACGACACCCGAAATAACGGCAACTGCGAGCATCACCGAGCATCAGTATCAATCCGGAGGCGGTACGAGTACAACGACAGCACCGAGCAGTTGTGCACTGACGAGTTATCCATCGTCTCACGGATCCATGCAGCACGGTTCGAATACGAGCGGGAACGGGGGCGGAGGAGGGGGCGGCGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGTGGTAACGGAAATGGGGGTGGAAACGGTGGCGGAAACACGGGCGGAAATAACGGGGGTAACAACGGTCAGGGCGGAGGAGGACCATCACCGGGACCAACGCAGTGTCCGAGCAATTGTCAGAGTCCATGCGCGAGTCCACAGGCGACGATAAAGAGAAAAAGGTCGACGAATCCTCAGGCGGATGAAAATTTCATAAGAGCCCTCGAGGCGGTCCGTTACGGTGGAATTGGATTTTGCAAAGCCGCACGTATGTTCGGCGTTAACAACCGAACGCTTTGGCTCGAGTACAAGAAACGCGGATATCCGAACAATCGTCCGAGCTTGAAGTCACGTGTGAAGCAAGAAACAAATTCATCACCGCCGCCGGCAACGTCCTCACAATCGTCCGTCAATTCTCAGAGTCCAACGCCAATGGGACCACCGACGACACCCCACAGTGCACACAACACACATCCAACTCACACGATGCTGACGGCGCACACTCCGCACACGATGCTCTCGGGTTATATCGACAGCAGACACACCGATTATACTCTGCCGAGCTCGACGATGCCGATCAATTTACACGGCGTTAATTACAATTCCATGTGA
- Protein Sequence
- MSMQQFCLRWNNHQPNFISVFSSLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASPTKWPSGNSEVGGGDRGESCSPSPSPLSPSFRRKRLRKTSTGSASGGSADKTEEINEITLVATNIVKPEPHIVPQEGGINLRRPMNATTDTQGSIDEDQISIMSNMESSTTTTPAQSEGSLQEVSHQSGGNIGQSSVGSQPPAHQGLQWTIMEHTYPRFALSSCQTNLSVQASSAFTTPEITATASITEHQYQSGGGTSTTTAPSSCALTSYPSSHGSMQHGSNTSGNGGGGGGGGGGGGGGGGGGGGNGNGGGNGGGNTGGNNGGNNGQGGGGPSPGPTQCPSNCQSPCASPQATIKRKRSTNPQADENFIRALEAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSLKSRVKQETNSSPPPATSSQSSVNSQSPTPMGPPTTPHSAHNTHPTHTMLTAHTPHTMLSGYIDSRHTDYTLPSSTMPINLHGVNYNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00629212;
- 90% Identity
- iTF_01057005;
- 80% Identity
- iTF_00051117;