Basic Information

Gene Symbol
JARID2
Assembly
GCA_946863875.1
Location
OX333079.1:18729814-18742725[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.4e-23 2.7e-19 70.0 0.0 6 89 1346 1427 1342 1427 0.94

Sequence Information

Coding Sequence
ATGGTATTGGGCAGAAATGACAAGAGAAAAAGGAAAGAGGGCGATCTCGTGGATCTCATGGATCCATTGTCCGAATCCCCCAAAAGAACAAAAGTTCATGCGCAGAGAAAATTCGCTCAAGGCGCGGCGACGGTCTTCAGTCCGGCACCGCCTCTGGTCAAAGAGAAAGAAAAAACAAAGCCGCCTGTGATAACTGAGCTGATAACGCACAAACGTCCGAATACCGAAGATTTTCTAACGTTTCTCTGCTTTCGCGGTACATCCATATTACCGCCGAGCTTGAATTTCTTCAATGTCGGCGCAAAAAAGGAGAAGTCCGATCCCAAGAGTACTCCAAAGACGAACGGTAAAACGTCGTCTACATCGTCGTCCGGCGCTCCAGGTCAACCCTCAAAGACTGATTCGAGCGGAAGTTCACCTGCAAAAGTAGGAACAAAGAATGCTCCTAGCGTGAAGAAAAAAATCGTTCCAATCGGGGGACAAAAAACACTTGGGAAATACAAAAATGCCACATCGACGATTCAGGCACTGAAGAAAAAGTATCAGGAGCAACGTCTCGCTAAACAGAGAATAAGAAACAAATTCAAAGCTTCGTGCGTGATGAGAACGCGCTCATCGACCGAGCACGTTGTTTTGAAATCTGGCACAAGATTGGAGCCGAGAAAATTCATATCGCGCAATGAGACGAGACGTCACGGTTTGCGAAGCGGTGGATTGACCGATAGAACAAAAAGATCAACATTATTATCGGCGAAAGTAGGAAAATCATCGATAGCGAAGCCGAAAAAGCGATTGTCGGTCAAGGAGCAAACCAGCGAATCCTCGGAATCGGAAACATCGTCGTCGGAATCCGACGAAGAATTATCGCGCACGAAGACTTCTCAGCAGATGAAGAAAACAACGGGCAAGATGTTGGAGAAGAAAATTTGTACTCGCAGTAAATCGGAGATGAAACGTATAACGAGATCGCAGCGAGAAAATTCAGTGTCGAAGCAACATTCGCAGCCGCAACAATCCGCTTCATTGTCGAGGCGACCATCGAGAAAGACGAAAGAAGCCGCGGCTGTTTACATGGAGATACTCGGACGTAAACTCGTGAGTCCCGATCTCGAGAACGATGAAAATCTATCGCTGGACAGTTTTCCTGAATTACCAAATGCGAGACGCACCGCACAAGCGGAAAACGAGATACGAGCGAAATCGCGAGTAGCCGTTAAGAGCATCAAAGATACGAGAGACAAAAATTCGAAGAACGACGAAAGCAAGAGCAAGACAAAGTCGGAAAAACCGATTTTAAAGAGCAAACGAACGCTCAGAGTTCGGAAATACTGCGAATTGGACAGCGAGGATGAATCCGAGACATCGGTAGAGCCGGAAAAAACGCGACAGTTGACGCGAAGAAGCGTAACGCAAAACGCTAAACCAGCAATACGAAGTTTGCGATCATCGTCGAGAAACCAAACGCCGAAACTCGAGACTCGTTCAACGACGAGAACGATCAAGGAGAAGACTGTGAAGAGCGTTAAACCAACGACGAAAAAGCCCGATAGCGATGAATCCGAGGAGGAAGAGTCATTGGGAAACTTGTTGGACAAACTCAATAAAAAGAGAACGGAAAAGTCCGAGGACAAGCGGGATAAATCATCGAGTCCGATCAAAACTATCGCAACGGAAACTAAAATAGAAATTTCATCGCGCAATGCAAACGACGTTAAAGCATCGCATCAGGTATCTGACGACGAGGAGTCTTTTCGCGGTTTCACGAAAAAGGCAATATCAAAAGTATTGAATTCCAGCAATTCTCACGTAAACCCAAACATTCTCGCGAACGAGGAAGTTTGCGTGAAACTTGACATTCCTGAAGCTCGAGAAACGCTGAAGGTTACGACTAAAATTGAACACAAGGAGGCGATAATTGCGAAACAGGAAAATCTCGTTGATACCGCAATCGTCAAATCAACGCTGGAGGAAAAACGCACCGATATCGTTGTGCCAAAGAGTGAGATGGACGTTAGCGTCGAGACAGAGACTAAGTCGATGCAAAAATGCATTCACACGACGGAGAACGAGGAAATCTCGACAATGAGTATCAACGATATGCCGGGAACGGGAAATCACGGTCGCAAAGCACGAGTCAATATGTCGACCGAGCAAATTGAGAAATGGTTGAACGAGAGCTCAATGGCGAGAGCGAAGCAAATGAGAAACAAGAGTGAGACGGATTCAAGCGTGAATTTTCACTTCGAAATACCGGAAAAGATGAAGAACGATACGAATCATTTGTCGATACCAACGAGAATTCAGCATCTCGTGCGTCCGGTAAATATAACGATACCGAAAATAGCGGAAAAATCGGCACGCGAAAGGGCCATTCTTCAGGCAAACAAAATCGTCACCAATATTATTCCACTTGGACGACTGCCGATCGCGAAACCTCTCAACATACCGATACCCAATAGAAACAAGATAAACGCCGATATAAAGGAGATAATAAAGGGTCGAAGCGCACGTGCGACCAGAGAGGCATCGATGGGCGAGGAGAGTGACAGCGTTTCGAAATCCGATCAGAATTCGACCGATGGCTCGCCGGACAAAAAATCGACACCCGAGAAGAAGGGAATATTTCAGCAGAGAAAGACTTTCTTGCCGCGCGTGAAGGAACGCAAAACAACGACACCGAGCGCCAACGCATTTTCACCGGAAAACGAGAGCAGCGTTTACGCTTTTGAGAGCGACACCGAGGTACCGATAAACACACCGTTCAGACGCAAACTCAAGGAACTCGGTGGAAAAACTGGTATGCCTGAAGCGGATGGTGCAAGATCGGACATTGGGTCCATCATTACGATGGATGAAGTCACGAGATTCAGCGATGTTGGAACGAGCAGCGAGAACGATTTGAAGACAGAATCGAAAACACGCCCGGAGAACGATGATAAATTCGTAATACCCAAGAGTTTTGGAAATTTGTCAAACGTTCAGGTATTGCCACTTGGAAAAATGCCCGCTGAATGGGGTGGTTCCAATTGTAGCGCTTCGATAGCGGTACAGGTGAATTTTAACGAACAAACCCAGGAGATTCGTCAGAGTGGGGATACGGAGTCACAGGAACGATCGAGCATTCAGCTGAATTCACAATCGATGAACGGCGATGAACAATCGGGACAACAAAAATGCACGGAGATATCGACCCAAACGGAGAGTACGAATGACCATGAGAATGACAATGACGGTCATGTATTTTACATTCCCCTTCAAACCGTTGGACGAAACGGACCGAATCTCGGTCAGGGTCAACAATTGATACAGGGCGTTGCCGTTAAACTCGGCACCGAGGGTCCGAATGGACCTAATCAGCGGGTATTATTGCGTGCGCAATTGGTAACAAAACCACCAATGGCGGTTGCAAGATGTCCTCCGGTCGGTACTGTTCAGCCAACGACGAGGAATCCACCGAATTCAACGAGCTCCACTTCCGTTCTTGATCATCCTTACGCCGTTGTCGATCCTACGGTACCGTCGACTTCCGCTATTTCCGTAACCGCGACGACCAGCACCGATTCAACGACGCCGCAACCTGCGCGTTCGATCTCGTCGAATTCAAACCAAAGGCTGAATTCCGGCAGCGGAAATACGATCGAGAAAATTACGAAATCACCAAAAGCAGCGAGAGAGAGGAAAGCTTCCGTCGATTCAAGCAAAATTGGCAAAAGACCTACGGCGAAATCCAGACAAAAAATATCGGAGATCATGTCACCGAGCAATGCAACAACTTTTCCATGCTCGAGCGATGCGATCAGTGCCGAGGCGCGTCTCGTCGAAGCACCGACTTTTCATCCGACCGAAAAAGATTTTCAAGATCCACTCGAGTACATCGACAAGATACGTTCGATCGCTGAGAAATTTGGAATATGTCGCGTCGTACCACCGGCTAATTTCAAACCCGAGTGCAAAGTTTCTGACGATATGCGCTTCACCGCTTACAATCAGTACGTTCATCGTATGCTTCATCGCTGGGGTCCCAATGTCAAGGAAATGATGGCGATTAAAAAGTACCTCGCTACTCAAAGCATAACGCTCACTCATCCACCATGGATCGGTGGAATGGAAGTCGATTTGCCACACTTGTATCAAACTGTGCAGAGTCTCGGTGGTCTGAAGGAGGTGATCGAGAAGAAAAAGTGGCAAAAAGTCGCCGATGGTATGAAAATCCCAAAATCAGCGCAGGATCGTGTGACGAAGCTCGACGATATTTATTGCAAATATCTGTTACCTTACGACACACTCTCGCCAGAGGAACGTGGAAAGCTCTTCAACGACGTGGAGGAGGATTGGAAGAAACGAGAAACAAAAACATTGCAGAGGCTTGATGCACAATTGATGGAGAATGACGATGACGAAGATGACGATAGCTCCGACGAGATCGAAGAGTGCATTATCAAAGGACGGAATATGCCGTTAAACGCATTTTATCGCATCGCTCGCAATACTCAACGGATGTGGTTCGGCGAGAATCAACGTTCTACGAGCGAGGCCGAAGGTGCATCGGCTGTTGAGGTCGAAGCTGCATTTTGGAAGCACGTTGCTGAGCGAAAGCGTCACGTTTGCGTTCACGCAGCCAGCATCGATTCGAGCGGTCGAGGTTTCGGCTTTTCCGTCGCCAAGAACAGTCCTTTTGCAAGACACCCGTGGAACCTTAAAGTTTTAACGAATAACGCTGGCTCGGTGCTTCGAGCGCTGGGACCTTTAATGGGAGTAACAGTGCCCACACTTCACGTTGGAATGCTCTTCAGCGCTTGTTGCTGGTATCGAGATCCTCATGGACTGCCTTGGATCGAATACCTTCACACCGGGGCGAAGAAAATTTGGTACGGCATTCCCGACGAGCACAACAATAATTTTCGCGAAGCTCTTTCGAAAATGGTGCCGCGTTATTGCAAGAAAAAAACAATTTGGCTTCCGTCCGATACAGCGATGGTACCGCCGGAATTATTAGTCAATAATGGCGTACCACTGTGCCGTACCGTTCAAGAGCCTGGGCAATTTATCGTTGTGTTTCCAAAAGCCTTTACATCGAGCATATGCACCGGTTACGTCGTATCCGAGAGCGTCTATTTCGCTCAACCAGCATGGCTCGAGAATGCCGAACAAGTTTTCAAAGATTTACAAGACAGTTGTGAGCCATCGATATTCTCGTTCGAGAGACTCTTGTTCAGCATCATAAACGATTCCCGTTCACAGTACGATGTATTGAAACAGATAATGCCAGCTGTGATAAAGATTCGCGAACGGGAGCTCGATTATCGCAAACAATTGGAATATATAGGACTAACGACAAAGGAAAAATTACCACTGCCGGATACTGGTAAAGGCAAGAAAGGCAAAAGAGTGAAGGAAGAGGACGGTGATTTCGAGTGCGAAACTTGTCGGGCCAATTTATTCGTGTCCCTCGTTAGTAATTCGCAAGACGACAGCGTATATTGTCTGCCCCATGCTCTTCAAATGATCGTACGAAAGAAACAAGCGTTGAAAAATTGTACTCTGATGTACGCTTATACAGAGGATGAATTGGACGATTTGATACACAAACTGGAAGATAGGATCGAAGCCAAATCGAAGAAAGCTAATCAAATCAGGCAATCTAAATAG
Protein Sequence
MVLGRNDKRKRKEGDLVDLMDPLSESPKRTKVHAQRKFAQGAATVFSPAPPLVKEKEKTKPPVITELITHKRPNTEDFLTFLCFRGTSILPPSLNFFNVGAKKEKSDPKSTPKTNGKTSSTSSSGAPGQPSKTDSSGSSPAKVGTKNAPSVKKKIVPIGGQKTLGKYKNATSTIQALKKKYQEQRLAKQRIRNKFKASCVMRTRSSTEHVVLKSGTRLEPRKFISRNETRRHGLRSGGLTDRTKRSTLLSAKVGKSSIAKPKKRLSVKEQTSESSESETSSSESDEELSRTKTSQQMKKTTGKMLEKKICTRSKSEMKRITRSQRENSVSKQHSQPQQSASLSRRPSRKTKEAAAVYMEILGRKLVSPDLENDENLSLDSFPELPNARRTAQAENEIRAKSRVAVKSIKDTRDKNSKNDESKSKTKSEKPILKSKRTLRVRKYCELDSEDESETSVEPEKTRQLTRRSVTQNAKPAIRSLRSSSRNQTPKLETRSTTRTIKEKTVKSVKPTTKKPDSDESEEEESLGNLLDKLNKKRTEKSEDKRDKSSSPIKTIATETKIEISSRNANDVKASHQVSDDEESFRGFTKKAISKVLNSSNSHVNPNILANEEVCVKLDIPEARETLKVTTKIEHKEAIIAKQENLVDTAIVKSTLEEKRTDIVVPKSEMDVSVETETKSMQKCIHTTENEEISTMSINDMPGTGNHGRKARVNMSTEQIEKWLNESSMARAKQMRNKSETDSSVNFHFEIPEKMKNDTNHLSIPTRIQHLVRPVNITIPKIAEKSARERAILQANKIVTNIIPLGRLPIAKPLNIPIPNRNKINADIKEIIKGRSARATREASMGEESDSVSKSDQNSTDGSPDKKSTPEKKGIFQQRKTFLPRVKERKTTTPSANAFSPENESSVYAFESDTEVPINTPFRRKLKELGGKTGMPEADGARSDIGSIITMDEVTRFSDVGTSSENDLKTESKTRPENDDKFVIPKSFGNLSNVQVLPLGKMPAEWGGSNCSASIAVQVNFNEQTQEIRQSGDTESQERSSIQLNSQSMNGDEQSGQQKCTEISTQTESTNDHENDNDGHVFYIPLQTVGRNGPNLGQGQQLIQGVAVKLGTEGPNGPNQRVLLRAQLVTKPPMAVARCPPVGTVQPTTRNPPNSTSSTSVLDHPYAVVDPTVPSTSAISVTATTSTDSTTPQPARSISSNSNQRLNSGSGNTIEKITKSPKAARERKASVDSSKIGKRPTAKSRQKISEIMSPSNATTFPCSSDAISAEARLVEAPTFHPTEKDFQDPLEYIDKIRSIAEKFGICRVVPPANFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTHPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFNDVEEDWKKRETKTLQRLDAQLMENDDDEDDDSSDEIEECIIKGRNMPLNAFYRIARNTQRMWFGENQRSTSEAEGASAVEVEAAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPLMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFREALSKMVPRYCKKKTIWLPSDTAMVPPELLVNNGVPLCRTVQEPGQFIVVFPKAFTSSICTGYVVSESVYFAQPAWLENAEQVFKDLQDSCEPSIFSFERLLFSIINDSRSQYDVLKQIMPAVIKIRERELDYRKQLEYIGLTTKEKLPLPDTGKGKKGKRVKEEDGDFECETCRANLFVSLVSNSQDDSVYCLPHALQMIVRKKQALKNCTLMYAYTEDELDDLIHKLEDRIEAKSKKANQIRQSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-