Basic Information

Insect: Allophyes oxyacanthae
Gene Symbol: -
Assembly: GCA_932294395.1
Location: CAKOAO010000227.1:1204741-1205781[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.092 6.1 8.0 1.5 3 23 29 50 27 50 0.91

2 10 0.049 3.2 8.8 0.0 2 23 76 98 75 98 0.95

3 10 0.00088 0.058 14.3 0.3 2 23 121 142 120 142 0.97

4 10 0.029 1.9 9.6 0.2 1 23 146 168 146 168 0.97

5 10 0.0013 0.084 13.8 2.7 1 23 174 197 174 197 0.97

6 10 0.0046 0.3 12.1 1.5 2 23 205 227 204 227 0.96

7 10 2.1e-05 0.0014 19.4 2.2 2 23 235 257 234 257 0.96

8 10 9.8e-05 0.0064 17.3 3.4 1 23 263 285 263 285 0.97

9 10 7.2e-06 0.00047 20.9 0.6 1 23 291 313 291 313 0.99

10 10 0.00011 0.0071 17.2 3.6 1 23 319 342 319 342 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.092	6.1	8.0	1.5	3	23	29	50	27	50	0.91
2	10	0.049	3.2	8.8	0.0	2	23	76	98	75	98	0.95
3	10	0.00088	0.058	14.3	0.3	2	23	121	142	120	142	0.97
4	10	0.029	1.9	9.6	0.2	1	23	146	168	146	168	0.97
5	10	0.0013	0.084	13.8	2.7	1	23	174	197	174	197	0.97
6	10	0.0046	0.3	12.1	1.5	2	23	205	227	204	227	0.96
7	10	2.1e-05	0.0014	19.4	2.2	2	23	235	257	234	257	0.96
8	10	9.8e-05	0.0064	17.3	3.4	1	23	263	285	263	285	0.97
9	10	7.2e-06	0.00047	20.9	0.6	1	23	291	313	291	313	0.99
10	10	0.00011	0.0071	17.2	3.6	1	23	319	342	319	342	0.97

Sequence Information

Coding Sequence: ATGAAGAACAGAGTCAATCTGAAAAATCTACTGCTCAATTCTAATGCAACTCCCATTCGGTGCAAAGACAGTCTTGGATACGGATGTTGCTTTTGCCCGAAGCAGTTTCAGGACCCCACTGTCCTTAAGAAACACTTCCTCGAAGAACATAACAatgataaattgataaaatacaTGTCCGCGAAATTGTTCGAACACGTAATCAAATTGGACATAACGTTCTTAAATTGCGCTCTTTGTGACAAAGACATTAACCAGCTAGATGATATGATTGCTCATTTGAAGATCGATCATAAAAAACCTATGTATATGGACGTAAAGAGCCAAATTGTCCCTTTCAGATTCGATTCTCCCGAATTAAAATGCGTCATTTGCGCTACAGAATTCGTTACATTCAAACTTCTACAAGAACATATGAATTCACATTTCGGGAACTATATTTGTGAAACGTGTGGAGCGGGCTTTGTGACCGATCGACTTCGGATGAGCCACGTGAAACGTCATGACAGCGGAATTGAGTTTAAATGCGATCAGTGCGAAAAATCGTTTACTAACGAACTAAAAAGACGCGAGCATCAGAACAGAACACATCTAGGTTTTGGCAAGAGGAATAAATGCAGCCACTGCCCAGAAAGATTCACAGATTACTGGAAGAAAATAGATCATATGATCAAAGAGCATGGGATGCCGCCCGTCGTCCTCAAATGTTCGGCTTGCGACCGAACTTTTAGCAACCAGAGATCATTGTCTCGGCATACAAAGAAAGATCACCTTATGGAGAGAAGGCATAAGTGTAGTGAATGTGAAATGAGATTTTTTGGGAAGAGCAGCTTACAGAAACACATGGTAAAGCATACGGGAGTGAGACAGTTTAGGTGCGACATCTGTTTAAAAGCTTATGGAAGGAAGAATACTCTAAGAGAGCATATGAGGATTCATGCTAATGATAGGAGGTTCGCATGCACGCATTGCGGTCAGGCATTCGTTCAGAAGTGTAGCTGGCGCGGTCATATGCGTTCCAAACATGGAGAGCAAGTGTAA
Protein Sequence: MKNRVNLKNLLLNSNATPIRCKDSLGYGCCFCPKQFQDPTVLKKHFLEEHNNDKLIKYMSAKLFEHVIKLDITFLNCALCDKDINQLDDMIAHLKIDHKKPMYMDVKSQIVPFRFDSPELKCVICATEFVTFKLLQEHMNSHFGNYICETCGAGFVTDRLRMSHVKRHDSGIEFKCDQCEKSFTNELKRREHQNRTHLGFGKRNKCSHCPERFTDYWKKIDHMIKEHGMPPVVLKCSACDRTFSNQRSLSRHTKKDHLMERRHKCSECEMRFFGKSSLQKHMVKHTGVRQFRCDICLKAYGRKNTLREHMRIHANDRRFACTHCGQAFVQKCSWRGHMRSKHGEQV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00111908;
90% Identity: -
80% Identity: -