Basic Information

Insect: Allophyes oxyacanthae
Gene Symbol: -
Assembly: GCA_932294395.1
Location: CAKOAO010000150.1:383770-385986[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.3 20 6.3 2.4 2 23 234 255 233 255 0.92

2 11 3.3e-05 0.0022 18.8 0.4 1 23 261 283 261 283 0.99

3 11 2.4 1.6e+02 3.5 5.1 1 23 287 309 287 309 0.91

4 11 0.0025 0.16 12.9 1.1 1 23 315 336 315 336 0.98

5 11 0.0018 0.12 13.3 0.1 2 23 342 363 341 363 0.96

6 11 0.005 0.33 11.9 3.3 2 23 368 389 367 389 0.96

7 11 9.2e-05 0.0061 17.4 1.1 1 23 395 417 395 417 0.99

8 11 5.9e-06 0.00039 21.2 2.2 1 23 423 445 423 445 0.97

9 11 0.00016 0.011 16.6 5.5 2 23 452 473 451 473 0.97

10 11 1.3e-05 0.00083 20.1 0.3 1 23 479 502 479 502 0.96

11 11 0.00019 0.013 16.4 0.6 2 23 509 532 508 532 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.3	20	6.3	2.4	2	23	234	255	233	255	0.92
2	11	3.3e-05	0.0022	18.8	0.4	1	23	261	283	261	283	0.99
3	11	2.4	1.6e+02	3.5	5.1	1	23	287	309	287	309	0.91
4	11	0.0025	0.16	12.9	1.1	1	23	315	336	315	336	0.98
5	11	0.0018	0.12	13.3	0.1	2	23	342	363	341	363	0.96
6	11	0.005	0.33	11.9	3.3	2	23	368	389	367	389	0.96
7	11	9.2e-05	0.0061	17.4	1.1	1	23	395	417	395	417	0.99
8	11	5.9e-06	0.00039	21.2	2.2	1	23	423	445	423	445	0.97
9	11	0.00016	0.011	16.6	5.5	2	23	452	473	451	473	0.97
10	11	1.3e-05	0.00083	20.1	0.3	1	23	479	502	479	502	0.96
11	11	0.00019	0.013	16.4	0.6	2	23	509	532	508	532	0.91

Sequence Information

Coding Sequence: ATGGCCAGCAGAATATTATTTGAAGATGACATTATGGAACATGATACTAATGaaagtatcaaaataaaaaaagaagatacaCCTGATGAGGGTAACTGTGATCAGGAACATGAGACTTTGGGTAAAAGTCAACCAAGCATTATACATGATCAAAATGTTACAAAAGAGACAGAGACAAGACTTTTTAACAACGTTTTGGGAGTAAAGGACGATATATTGACTTGCAATGCAGAGGGTAATACTGATCAAGTAGATTTAATGACAAGTTCTGTCATAATTCTTGGTAAAAATCAAGTGGCTGATAACACTGATACTAATTGTGAAGCTAAGGGTAAAACCAGAGAAGATAGCGGAAATATAGATAAAAGCTATGAAGTTCCAATTGAGGGTGTTGATGATGAAGAAGAGGGTATCATTGGTCAAAATTGTTTCATTTTTGGTAAAGCCAAAACAACGCCTATAGTAAAACCCAATGGTAAGAAAAGACCGTCAGAACTTGAGATGCTTGGTGTCGATGTGAAATTTAATTATGAAGCAGTCGATGATAAATATGATGTGTTTGGGGATGACAGTAAAATATACAGGAAATATAAGTTGAGGAGGAGTGAGCAACTGATCTCTTACAAGGAACCTAAAGAGTGGAAACCTGCAGAACTGATACCCAAACGCGATTGTTCGGAAGATGAAAAAAAACCATTAATCTGCTCCATATGTTCCTTAGATTTTGATTCAAAAAAGGCACTTCATCTTCACAGCCATTACCATCGTACTGTACTACAGTACAAATGTGCCATTTGCTCACTAACTTTCGAAAAAAATTCAGACCTCATTGCCCACAAATCTACACATACCGAATCTTTTCTCTGCAAAAGATGTAAAGTAGCATTTTCGGATCACTGTGACTTTTTGCAGCACAACTTACAGCACACAAACCAGACGCAATTCAAATGCCCGGAATGCGGACTTAAGTATGGCAAAACTAGTTACAGAAATCACATTTACACTCATTTCGACAAGAAAGTCAGTTGTCCAATTTGCCCTTTCATTACCAACGGGcaatttaatttaagaaatCATATAAACCAGCATGCTTATAAATTAACTTGTGTTGAATGTGGCAAAGATTGCAATAATAAGAAAGCTTATGATCACCATATGAGTATGCATACTGGGGTAAAAAAGTACCAGTGTTTTTACTGCGGGAAAGGCTTTGGTAATGTAAGCATGAGAACTGTTCATACAAGAACCCATACAGATGAAAGACCATACGCTTGTGACGTATGTGGGCACAAATTTAGGCAATCAGgggatttaaaaaaacacaaaagcaCTCATGAGTCTGAAAAGAAGATCTCCTGTGATCATTGTGACAAAAAGTTTTACCGTGATGAGTGTTTGAGGCTACACATGAGAAGACATATGAGGACCAATTTGTATGAGTGTCCAGAATGCGATGGAACTTTTACAAGTGCGAGTGGACTGAAAACTCACACAATGTACAAGCATTTGACGGACAGGCCTATAGAATGTGAAGTTTGTGATAAGAAATTTGTCAATCGGAACGGGTTTCTAAAACATACTCGGTCTCTGTACCATAAGAGGAACATGTTTGGTTATGTGactaaaaaggaaaataatgaatga
Protein Sequence: MASRILFEDDIMEHDTNESIKIKKEDTPDEGNCDQEHETLGKSQPSIIHDQNVTKETETRLFNNVLGVKDDILTCNAEGNTDQVDLMTSSVIILGKNQVADNTDTNCEAKGKTREDSGNIDKSYEVPIEGVDDEEEGIIGQNCFIFGKAKTTPIVKPNGKKRPSELEMLGVDVKFNYEAVDDKYDVFGDDSKIYRKYKLRRSEQLISYKEPKEWKPAELIPKRDCSEDEKKPLICSICSLDFDSKKALHLHSHYHRTVLQYKCAICSLTFEKNSDLIAHKSTHTESFLCKRCKVAFSDHCDFLQHNLQHTNQTQFKCPECGLKYGKTSYRNHIYTHFDKKVSCPICPFITNGQFNLRNHINQHAYKLTCVECGKDCNNKKAYDHHMSMHTGVKKYQCFYCGKGFGNVSMRTVHTRTHTDERPYACDVCGHKFRQSGDLKKHKSTHESEKKISCDHCDKKFYRDECLRLHMRRHMRTNLYECPECDGTFTSASGLKTHTMYKHLTDRPIECEVCDKKFVNRNGFLKHTRSLYHKRNMFGYVTKKENNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -