Basic Information

Insect: Allophyes oxyacanthae
Gene Symbol: -
Assembly: GCA_932294395.1
Location: CAKOAO010000200.1:3805-20153[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00045 0.03 15.2 0.2 2 23 142 163 141 163 0.93

2 10 0.00066 0.043 14.7 2.4 1 23 169 191 169 191 0.96

3 10 7.6e-05 0.005 17.7 0.3 1 23 285 307 285 307 0.98

4 10 0.00069 0.045 14.6 0.0 3 23 386 407 384 407 0.90

5 10 0.00054 0.035 15.0 0.0 1 23 422 444 422 444 0.93

6 10 1.6e-05 0.001 19.8 0.2 1 23 476 498 476 498 0.98

7 10 0.00071 0.046 14.6 0.2 1 23 504 526 504 526 0.97

8 10 0.0004 0.026 15.4 0.3 1 23 532 554 532 555 0.95

9 10 0.13 8.9 7.4 1.2 3 23 569 590 568 590 0.88

10 10 0.0087 0.57 11.2 0.0 1 20 749 768 749 771 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00045	0.03	15.2	0.2	2	23	142	163	141	163	0.93
2	10	0.00066	0.043	14.7	2.4	1	23	169	191	169	191	0.96
3	10	7.6e-05	0.005	17.7	0.3	1	23	285	307	285	307	0.98
4	10	0.00069	0.045	14.6	0.0	3	23	386	407	384	407	0.90
5	10	0.00054	0.035	15.0	0.0	1	23	422	444	422	444	0.93
6	10	1.6e-05	0.001	19.8	0.2	1	23	476	498	476	498	0.98
7	10	0.00071	0.046	14.6	0.2	1	23	504	526	504	526	0.97
8	10	0.0004	0.026	15.4	0.3	1	23	532	554	532	555	0.95
9	10	0.13	8.9	7.4	1.2	3	23	569	590	568	590	0.88
10	10	0.0087	0.57	11.2	0.0	1	20	749	768	749	771	0.93

Sequence Information

Coding Sequence: ATGGACGGGGAAGCAGAAGATTTCAACCTCCAATGGGAGGAAGAAGTTGAAGAAAAGCACTGTCCAGGTATAGTTGAGACAGAAGAGGTGATACCAGGCCTAGATAACGTACAGGATGCATCATATTCCAACATGACATCGGAGGAAATGATGAGTACGGACCAAATGGCTGCAGAAAACTTAATGTTTCTAGCTCAAGATGTAGTGAGTTATACAGAAACAGCGGAACTGGCCGCTGACCCTAATGTGGAGTGTGTCACTGAAGAGGTGATCACAGATGATTGGGTGATATCCGGCGGGCAGGAAAGAGTTGAAGTCCCCATGGAACATCTAACTCATCCTGAAATGGTTTTAAAAGAAGAAAACGACATAGATGTACCTTTACCAACGGATCAAGATGAATACACGGCGATGCGTCCGTGGCCCTGCGACTTCTGTTCGCGCCGGTTCCGTAAGAAGGCGGCGCTTATGAACCACATGGTGGCTCACCAGAACGACAGGCCGCACGCTTGCAACCTCTGCGGCGTGCGGTATGTGCGCAAGTGTGATCTCATGAACCATCTCAAAGTACATGCGTTTGTGCCAGACAACCCGGATGCCATAGATTATGaaGATGTTTTAGATAACAACCAAATTATAAAACCAAAGAAGAAACGAGGTCGGCGGAAAAAGAATCCTGATCCAGTGGAGGAGAACGGCGCGGGCGTATGGGAGAACATGACGTCAGCGCGCACGCAGCAGTGGTcgcggcgcgcgcgctcgcCGGCGCGGCCGCCCCCCtccccgcccgcgccgccccgcGAGCGCGAGCCGCCcgagccgccgccgccgcccgccgacCCCACGCGCCCCTTCGTATGTCGCCACTGCGGCGTCGGCTTCGCCCGCGAGAAGGCGCTGCAGTCCCATGCTAGGgtgcACGGTGGCGATTCTCCAGTAGAATGCGGATCTTGCGGGGAGTTGTGTTGGTCACGCGAGGCATTAGCGACGCACACGCAGCAGCGACACCCGCACTTGCCCCCGCGCACCGAGCAGCCCGACCCGCCTTACGACGACTCCGATTCGGGTGATGACATGGAGTTCCGCCTGTCCCCGCTGTCGCACGGCGGCGGCGAGCGCGCGGTGTACGATACGATGCGCGGCCCCGAGCTGTTCTGCCAGGACTGCGGCGTCGCCTTCCAGAGAGCCGACCTGCTGAGGCGACACGTGGCTGCCGCGCACAGTTACAAACGGCATGACAGCACGAGCAGCGCGTGGGCCGAGCACACGTGCGACGACTGCGGCGAGGGCTTCACGGACGCGCTGCAGCTGCTGGCGCACGCCGAGGGACACGCCGAGCGGCACCGCGCGCCCGTAGCCGCGCCCAGGTTAAAAAGAATGTCCAGAGGCCGAAATAATACATCATCATCAAATAGTTCACGGCAATTCCCCTGCAGAGTGTGTGGCAAGGTGTTTGGTTCGCGGAGCTCGCAGCAGATCCACATCCGGATCCACACGGGCGAGCGGCCGTACGCGTGCCGGTTTTGTTGGAAGGCGTTCGCGGACGGCGGCACGCTGCGGAAACACGAGAGGATACACACAGGAGAGAAACCGTACGCATGCGCGGTGTGTCCTCGCGCCTTCAACCAACGCGTTGTGCTGCGCGAGCACGTGCGCTCTCATCACTCCGCGCCCGACAGGCGCTCCAATGGTGGCCCCGCCTACTGCTGCATAGTGTGCGGGCGCACGTTACACTCAAGCGCGGAACTGGTGCAGCATCTGATACAACACTGCGACGCCAACACGGCGCTCAAGAGACAGCCGCAGACTGGACCGCGGAAGTACAAGCGGCGGCGAAAACTGAAAACAGAACAGTCTCCCGCGACGCCGCGCGAGTGGGAGCGCCCATCACCGTCGCCGCCTCCGGCGTCGCGCACTTCCTCACCCGCTTCGCGCGACGACGAGGGCGCGCGCGCCTCCCCCGCGCCGCCCGACTCGCCGCCCTCCCcctcgcgccgccgccgccgccgcgccgcgtcgCCCGCGCCCCGCCCGCGCATGATCCACACGGAGGAGCCGCGCCCGCGCACCAAGCAGGTGAGCCCGGGCGgagcgcgccggcgccgcggcccccccgcgcccgccgcgccgcccgcgcccgccggcCGGcccgtgcgcgcgcgccgccccccgcgccgcccggcCGACGACCTGCGCGCCATCGGGCCGCGGCCGCCGTCGCCGTCGCTGGACGCGGGCGGGCCCTTCAAGTGCGAGATGTGCGAGCTGGAGTTCCCGCGGCGCGACGCGCTGCTGCTGCACGTGCCGGTGCACATCTGa
Protein Sequence: MDGEAEDFNLQWEEEVEEKHCPGIVETEEVIPGLDNVQDASYSNMTSEEMMSTDQMAAENLMFLAQDVVSYTETAELAADPNVECVTEEVITDDWVISGGQERVEVPMEHLTHPEMVLKEENDIDVPLPTDQDEYTAMRPWPCDFCSRRFRKKAALMNHMVAHQNDRPHACNLCGVRYVRKCDLMNHLKVHAFVPDNPDAIDYEDVLDNNQIIKPKKKRGRRKKNPDPVEENGAGVWENMTSARTQQWSRRARSPARPPPSPPAPPREREPPEPPPPPADPTRPFVCRHCGVGFAREKALQSHARVHGGDSPVECGSCGELCWSREALATHTQQRHPHLPPRTEQPDPPYDDSDSGDDMEFRLSPLSHGGGERAVYDTMRGPELFCQDCGVAFQRADLLRRHVAAAHSYKRHDSTSSAWAEHTCDDCGEGFTDALQLLAHAEGHAERHRAPVAAPRLKRMSRGRNNTSSSNSSRQFPCRVCGKVFGSRSSQQIHIRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHVRSHHSAPDRRSNGGPAYCCIVCGRTLHSSAELVQHLIQHCDANTALKRQPQTGPRKYKRRRKLKTEQSPATPREWERPSPSPPPASRTSSPASRDDEGARASPAPPDSPPSPSRRRRRRAASPAPRPRMIHTEEPRPRTKQVSPGGARRRRGPPAPAAPPAPAGRPVRARRPPRRPADDLRAIGPRPPSPSLDAGGPFKCEMCELEFPRRDALLLHVPVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01064911;
90% Identity: -
80% Identity: -