Aoxy011889.1
Basic Information
- Insect
- Allophyes oxyacanthae
- Gene Symbol
- -
- Assembly
- GCA_932294395.1
- Location
- CAKOAO010000149.1:2800927-2813096[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 9.8 6.4e+02 1.6 0.8 2 19 266 283 265 287 0.72 2 13 0.00085 0.056 14.4 2.4 1 22 292 313 292 316 0.92 3 13 0.0037 0.25 12.3 0.9 2 23 440 462 439 462 0.94 4 13 0.011 0.72 10.9 0.0 1 23 468 490 468 490 0.94 5 13 0.032 2.1 9.4 0.2 1 23 500 523 500 523 0.88 6 13 2.6e-07 1.7e-05 25.4 3.5 1 23 528 550 528 550 0.98 7 13 0.0011 0.075 14.0 1.1 1 23 556 578 556 578 0.95 8 13 0.00012 0.008 17.0 4.9 1 23 584 606 584 606 0.98 9 13 3.8e-07 2.5e-05 24.9 0.9 1 23 612 634 612 634 0.98 10 13 0.00092 0.061 14.3 3.8 1 23 640 662 640 662 0.98 11 13 0.00032 0.021 15.7 0.1 1 22 668 689 668 689 0.95 12 13 0.0054 0.35 11.8 2.0 1 21 696 716 696 718 0.95 13 13 6.5e-06 0.00042 21.0 3.6 1 23 724 747 724 747 0.96
Sequence Information
- Coding Sequence
- atgGAAGTATTTCTATATAATTCTAATGTTTGTCGATTATGTGGAGAAGAAAATGACAATGGAACTTTATTATATTCGAGTGAAGAAAATAGCCAAAACTTAAGTGAAGTAATTAACACGTATTTGCCCATCAAGGTGTCCGATGATGGACAACTGCCACGGACCATTTGTCCAGGATGCACCATACAATTGGAAGCCACCGTAGAATTCCTAACTCTTATTATAAACGGACAAAAAGTTATTCGTGAACTTCATCTCAGAGAAAAAGAGTATAAGAAAACAATACTCAATCCCACAAATGAACAAGAAATTTTAACAGAAAAGATAATTTACGAAGtaaatACTAGTGATGGAGTGTACCAAGTCGAACACCCAATTGCCTTACAAGTTGCTGGTCTTGAAAAGCCAAAGCGAAAACGTGGCAGGCCACCGAAAAAACCTAAAACTCCCGAAGAGTTGGCTAAGGAGGCAGCTGCCAAGGAAAAGGAGGTTAAGTTTACCAAAAAAGAAGACAAAGAGGATGAGCCCACAGGGAAACGGAGGAGAAAAACTCCAACGAGGTTCAGAGAGGCCGTCCAGGGTAAAGAACTAGAGAGGATATTCAAAGAAGAAGGTGTGACTGATGGAGAAGACAGTGAACATGAGGTGAAGCCAGAACTTGATGCAGATCCGAAACCCCAAGTGCCAAAAGAGCCTGAGGTCATCGGCCATATGGAAGAGTCAGGGGAACTGGTTGTTGTGGTCAAAGGGAAGGGACGTGGGAGGCCTAAAGGACCGATGCGCCTAACCCGCAAGGAATGCGCCATTTGCGGAATGGAGTTTACTTGTACTGGCCGATACATGTCCCACGTAGCCCAACATGGGCCAGTCTTGTACCAGTGTGGAGAGTGTTCGGAGACTTTCACTACCCGGCTACACTTCACCAGCCATCAGCAGGAGCTCAGACATACTGGACAAAATATTATACCTTGCAAGAAGAATGTGGAGAGAGCCACTAAGAAATATGAAAGGATAAAAGCAGAAACAATAATATCAGACCAACAACAAACAGAGAAGCCTGATTCACCAAATGTTGAGATTATAGACAACGTGATTTTGCCTGATTCCTTGCCAGATCTTAATCCGCAGCCTATAGTTATTGAGAGTGAGGTGCCTGCTGCGGAGTTCCTCAAAACGGAGAGTCCAATCATTGAGATAACTTCTAGTCCAAGCGTGGATAGTGACGTGAAAGTTCTTGacACAACCACAGATGCAGTGACGGAAAAATCGGATGAAGTAGAACAAACAGAAATCACTCCAAGCGGGAAAGTGAGACTCAAGTGTAACCAGTGTGACAAGACGTTCGGCAGTAAACAGAGCAAGTCTATGCATATCAAGGCGGCGCACCAGGGCGAGCGGGCGTACGCGTGCGCGGAGTGCGGCGCGCGCTTCGCGTACCCGCGCTCGCTGGCGCTGCACGCCGTGTCGCAccgccgcgcgcgcgccgccgcccgggggTTCGCGTGCGACCTGTGCGGGAAGGTCTTGAATCACCCATCGTCCGTCGTGTACCACAAAGAAGCGGAACACGCGGGACAACGTTATGTGTGCAACAAATGTGGCAAGTCGTTCAAACACAAGCAGCTGCTGCAACGTCACCAGCTGGTCCACTCGCAAGACAGGCCCTACAACTGTAAGTCATGCAGCGCATCGTTCAAGACGAAAGCAAACCTGCTGAACCATTCCCTCCTGCACTCCGGCGTGAAGAAGTTCTCCTGTGAGATCTGCAAGCACAAGTTCGCGCACAAGACGAGCCTCACGTTGCACATGCGGTGGCATACTGGTCAGAAGCCATTTTCGTGCACGACTTGCGGCAAGAGTTTCAGTCAGAAAGGCAACCTGTCTGAACACGAGCGCATCCACACGGGCGAGAAACCCTTCCAGTGCAGCATCTGTCCGCGCAAGTTCACCACGTCCAGCCAGCACCGCCTGCACGCGCGCAGACACGCTGCAGACCGGCCCTACGCCTGCGCGCACTGCGGGAAGAGGTTCGTGTCGCGCGGCTCGTGGGCGGCGCACGTGCGGCGCGAGGGCGGCGGCCGCACGCACCGCTGCGGGGAGTGCGGCCGCACGTTCGCGGAGCGCTGGCCGCTACTGAAGCACCTCCGCTGTCACTCCGGCGAGCGCCCCTTCCGCTGCCCGCACTGCCCCCGAGCCTTCGCAGACTGCTCCAACCTCAACAAGCACAAGAAGCAAGTCCACAAACAAATCAGCCTACTCGCCAACTCGAACACACAGTCGCAACCCTCGCCACAGCCGAACCCCCTGGAACTGCCCCAGATACCAGAACCGGAGCAAACTATCGCCATCCCGCAGACGTCGCCTGTCAAGCTGGTCGAGGAGGCGCAGGACGATGAACTGGAGGAGCGCGTTATATACGTGACGTACGACGTGGACGAGTCGGACTCGCCCGCCTTCCATATACTGGACCCTGAACAGGCAGCTAGTCTGGACAGCAATAAGGTGCTAACTACATGCGAGCTGTACTCTGGCCCGTCGCTGATGGTCCCAGAGCCGGAGTACGAGCAGCTCGAGCTGGAACAAGAGCAGCTCGAACTGGACCACGAGCAAGAGCTGGAGCAGCTGCCCGAAGAGCTAGTGTTAGACGGACACGAGCATATGCCTGTGACGGACGAGCAGGGTAACCCGCTGCATTTTACGATGCAAGATGGTACAAGGCTTGCAATCACATCTGCTGATGGCAAATCTTTGCAAGTGATAACGCAGGATGGCCAGACCATACCTGTTGAGATTAATGGATACGCAGATGACGAGgAGGTAGACAATCCTGACACGATCGTGCATCAGCTCAATCTACAGAAGAGCGTCGAGTCCAACGTGTCGACGCCTGTCACTCATTATTTCACGATCGTTTAG
- Protein Sequence
- MEVFLYNSNVCRLCGEENDNGTLLYSSEENSQNLSEVINTYLPIKVSDDGQLPRTICPGCTIQLEATVEFLTLIINGQKVIRELHLREKEYKKTILNPTNEQEILTEKIIYEVNTSDGVYQVEHPIALQVAGLEKPKRKRGRPPKKPKTPEELAKEAAAKEKEVKFTKKEDKEDEPTGKRRRKTPTRFREAVQGKELERIFKEEGVTDGEDSEHEVKPELDADPKPQVPKEPEVIGHMEESGELVVVVKGKGRGRPKGPMRLTRKECAICGMEFTCTGRYMSHVAQHGPVLYQCGECSETFTTRLHFTSHQQELRHTGQNIIPCKKNVERATKKYERIKAETIISDQQQTEKPDSPNVEIIDNVILPDSLPDLNPQPIVIESEVPAAEFLKTESPIIEITSSPSVDSDVKVLDTTTDAVTEKSDEVEQTEITPSGKVRLKCNQCDKTFGSKQSKSMHIKAAHQGERAYACAECGARFAYPRSLALHAVSHRRARAAARGFACDLCGKVLNHPSSVVYHKEAEHAGQRYVCNKCGKSFKHKQLLQRHQLVHSQDRPYNCKSCSASFKTKANLLNHSLLHSGVKKFSCEICKHKFAHKTSLTLHMRWHTGQKPFSCTTCGKSFSQKGNLSEHERIHTGEKPFQCSICPRKFTTSSQHRLHARRHAADRPYACAHCGKRFVSRGSWAAHVRREGGGRTHRCGECGRTFAERWPLLKHLRCHSGERPFRCPHCPRAFADCSNLNKHKKQVHKQISLLANSNTQSQPSPQPNPLELPQIPEPEQTIAIPQTSPVKLVEEAQDDELEERVIYVTYDVDESDSPAFHILDPEQAASLDSNKVLTTCELYSGPSLMVPEPEYEQLELEQEQLELDHEQELEQLPEELVLDGHEHMPVTDEQGNPLHFTMQDGTRLAITSADGKSLQVITQDGQTIPVEINGYADDEEVDNPDTIVHQLNLQKSVESNVSTPVTHYFTIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01221828;
- 90% Identity
- iTF_01342412;
- 80% Identity
- -