Aoxy020745.1
Basic Information
- Insect
- Allophyes oxyacanthae
- Gene Symbol
- -
- Assembly
- GCA_932294395.1
- Location
- CAKOAO010000352.1:991324-996004[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.1e-11 4.5e-08 33.1 0.1 1 45 11 55 11 55 0.98
Sequence Information
- Coding Sequence
- ATGCCTTCAAGGCGAGTGCGAGCTACTTGGACTGAAGAAAGCTTGCGTGCAGCCATGGTAGCAGTAGAAGAGGGTCATTTGACACAATGTGCTGCTGCAGAGCTTCATGGTATTCCAAGACAAACACTAGCCGGTCACCTGAGAACGGGGAACAGCGTCAAACGAATGGGCAGAATTACATTACTAAACGAAATAGAAGAGAATATTCTCGTTAATAGATTGATGAACCTTTCAAATAACGGGCTGGCTCTTACCTCCAAAATAATCTGCAGAGAAGCTTTTGCTTATTgcgaagaaaataatattagacataattttaattcggGCCTTGCTGGAAAGAAGTGGCTTAGGGGGTTTTTAAAGAGGCATCctATTCGATTAAAATACCAGCAAAGAAAGCTCAATCTAAGCGAGCTGCGTGGTCACAAGAAAGCCTTCGAGCAGCCATGGCCGCCGTACAACAGGGGCAGTTGA
- Protein Sequence
- MPSRRVRATWTEESLRAAMVAVEEGHLTQCAAAELHGIPRQTLAGHLRTGNSVKRMGRITLLNEIEENILVNRLMNLSNNGLALTSKIICREAFAYCEENNIRHNFNSGLAGKKWLRGFLKRHPIRLKYQQRKLNLSELRGHKKAFEQPWPPYNRGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -