Aoxy003973.1
Basic Information
- Insect
- Allophyes oxyacanthae
- Gene Symbol
- retn
- Assembly
- GCA_932294395.1
- Location
- CAKOAO010000048.1:1131295-1143361[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.8e-19 7.7e-16 58.7 0.0 11 89 178 250 172 250 0.91
Sequence Information
- Coding Sequence
- ATGGCTGATGGGCCGCGCGACCGCACCGCGCCGCATTATCGCGCGCCACCGCCACCGCAGCCGCGATTTTCATTCGTTTCTAATAAATTGATACGAGGGCTACGCGACGCGCCATTGGTCGACTCGTTCCCCGGACTTCGATCCTCGTACCCTGACCgtacgaaGAGTGAAACAATTTTCCCTGAAGTTAATGTGCAATTGAACGCGCCTGAGACCGTCCACTTGGAGTATTACCAACACTCACGAATAATTGAGATTGATCGAGTCGTGAATCGAGTGGGGCGGTGCAATCAAAAGCGTATCAGACCAATGGGCGGCCGGGCCGGGCTCGCGCACGCCTCTCATTGGCTCGCCGCGGGGTTGTCGGGCACCAAGGGCCTTGATACTGCTCTCGATAAGCGGGAGGCGTCCAATGTCGATTCGATCGATTATCGCCCGTGTCGTCGTGCGCCAGTGACCGCGCCGCCGGATGCACTGCACCGCGCGACTATGCCCCTTGACGTTTTGATAGCCCACGCCGCGTCATTAATACATTTTTGCACTCCAATCAACCGGCTACCAATAATGGCAAAGTCGGTGTTAGACCTGTACGAGCTGTACAACTTGGTGATAGCTCGCGGCGGGCTGGTGGAGGTGATCAACAAGAAGCTGTGGCAGGAGATCATCAAAGGGCTGCGGCTGCCATCGTCTATCACGTCTGCAGCCTTCACGTTACGGACACAGTACATGAAATACCTGTACGACTATGAGTGTGAGAAGAAGAACTTATCGACCAGGAATGAGCTGGACGCTGCCATCGAGGGCAACAAGCGCGAGGGACGCCGCGCCTCGGGGCAATACGACGCACAAGCGGCATTATCTATGCCGCCTCTCAACCGCGTGCCGGCGTCGCTTGCACAACTATCACAACACATGCAGCCTCTCTCCCTGTCGCTAGGTGGAGTGGCCCCGCGACTGCCACCACTaccgccgcacgcgccgcatcTTGCGCAACACGATATTGAGTACAGGGTGCGCGAATATATGAAGATGATTCAGCAGCAGAGGGAGCTCATGAGAAATgGCTCCGAGTCACCCCCCAGCAATGGCCCAGCGCCAATAATGTCACCACGCGACGCAGCCGCCCTCAGTGCCATCGACGTCTCACGCCTCACACTCTGGTCGCTCtacaacaataacaacaacaacagcccGCAACCAGACCTCGAGCCACAACGCGAGGCTCTAAACCTGAGCGAGAGCCCCAACTCGGTGACGAGCGGCGGCAAGCGCGAGGCGTGCCGctcgcccgcgccgcccgccaagCGCCGCACCCCGCGCCCCGCCTCCCCGCGCACCGACCTGCACTCGCCGCCCGCGCACCGGCACCAGCGGCGGGAAGCTACGTCACCATCGCAGATCAATGGAGTTCCAAACGCGAATGGCGTCAATGGAGCTGCCTTCAAGATTACTACCAGAGGCGATGCAAGCACAGGAGACCAGCAGTTGGTGGTGTCAATAGAGTTGAACGGCGTCACGTACGAAGGTGTACTCTTCCCCTCCGGCAACGGTCAGAACGGACACAGGCAAATGGTGTCCTAA
- Protein Sequence
- MADGPRDRTAPHYRAPPPPQPRFSFVSNKLIRGLRDAPLVDSFPGLRSSYPDRTKSETIFPEVNVQLNAPETVHLEYYQHSRIIEIDRVVNRVGRCNQKRIRPMGGRAGLAHASHWLAAGLSGTKGLDTALDKREASNVDSIDYRPCRRAPVTAPPDALHRATMPLDVLIAHAASLIHFCTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRNELDAAIEGNKREGRRASGQYDAQAALSMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSVTSGGKREACRSPAPPAKRRTPRPASPRTDLHSPPAHRHQRREATSPSQINGVPNANGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -