Basic Information

Insect: Aleochara curtula
Gene Symbol: -
Assembly: GCA_963978815.1
Location: OZ022215.1:19958324-19972588[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.2 2.2e+02 2.5 0.2 3 23 305 327 304 327 0.87

2 15 3.3 3.3e+02 1.9 2.1 1 22 482 503 482 506 0.90

3 15 0.053 5.3 7.5 0.4 2 19 565 582 564 582 0.97

4 15 5.9e-05 0.006 16.8 2.6 3 23 604 624 603 624 0.98

5 15 0.018 1.8 9.1 1.0 1 22 629 650 629 653 0.89

6 15 0.00076 0.076 13.4 1.9 2 23 661 683 660 683 0.93

7 15 0.00052 0.053 13.9 0.4 2 22 689 709 688 709 0.94

8 15 0.098 9.9 6.7 2.3 1 17 760 776 760 782 0.83

9 15 0.00088 0.088 13.1 0.4 1 23 788 810 788 810 0.98

10 15 1.2e-05 0.0012 19.0 0.4 1 23 824 846 824 846 0.95

11 15 0.0012 0.12 12.8 1.5 1 23 851 876 851 876 0.97

12 15 0.018 1.8 9.0 3.5 1 23 882 904 882 904 0.97

13 15 0.0026 0.26 11.7 8.6 1 23 910 932 910 932 0.99

14 15 0.0012 0.12 12.7 2.9 1 21 938 958 938 963 0.93

15 15 9.9 1e+03 0.4 2.7 1 13 969 981 969 994 0.62

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.2	2.2e+02	2.5	0.2	3	23	305	327	304	327	0.87
2	15	3.3	3.3e+02	1.9	2.1	1	22	482	503	482	506	0.90
3	15	0.053	5.3	7.5	0.4	2	19	565	582	564	582	0.97
4	15	5.9e-05	0.006	16.8	2.6	3	23	604	624	603	624	0.98
5	15	0.018	1.8	9.1	1.0	1	22	629	650	629	653	0.89
6	15	0.00076	0.076	13.4	1.9	2	23	661	683	660	683	0.93
7	15	0.00052	0.053	13.9	0.4	2	22	689	709	688	709	0.94
8	15	0.098	9.9	6.7	2.3	1	17	760	776	760	782	0.83
9	15	0.00088	0.088	13.1	0.4	1	23	788	810	788	810	0.98
10	15	1.2e-05	0.0012	19.0	0.4	1	23	824	846	824	846	0.95
11	15	0.0012	0.12	12.8	1.5	1	23	851	876	851	876	0.97
12	15	0.018	1.8	9.0	3.5	1	23	882	904	882	904	0.97
13	15	0.0026	0.26	11.7	8.6	1	23	910	932	910	932	0.99
14	15	0.0012	0.12	12.7	2.9	1	21	938	958	938	963	0.93
15	15	9.9	1e+03	0.4	2.7	1	13	969	981	969	994	0.62

Sequence Information

Coding Sequence: ATGATCTCGGATTATGAGGATGATGAGCATTTCTGCATCAAATGCCACATTACCATCCACGGACTTAATAATTACGTCAGTCACCGAAAGACGAATTGTGGCGCTGTACCAAAGGCGATTCCCGTCCTACCCAAatcgccgccgttgccgctcCTCGCGCAGGACGAATCCTTCGGATTGAAAGCGGACGACTTCTTCTCGTCGCTAGAGCTGCAGAGCAGCAGTAAAAAGCCGGCGGCGCCATCAACAAGTGGGAAAACATCCACGAGCGGTATACTGACGCGCAGTAAGACGTATGCCGTTATTCATGCGACGGCCGGATCGAGTGGTAACGCGCAGGACATTGAGCCGCCGCAAGAGACCAAGTCCGGCAAGAATGCGTGGATTGGGGGGCATCAGCTCAAAGAGCTCGGTAGCGGTGATAATCAGGCACGATTAATCAAGGCCGTTGATAATTTGACGCGCAGCACATACCTAAACCATAAGAAGGAAGATCCGCCTGCCACGTCGTCGATCGTCGAAACGTACAATGACAACTCGGAGGAGGAGAGCGATGACTATGATTATGAAGACGaggacgatgacgatgaagaACCACCTCAGCACCACACGGGCGGTAAATGGGCGCCGAATTGGTATTATCAGAATGTTCAGCACGCCAAGAGAAAGTCGAGCGCTGAAGATTCACATACGTCGCCTCCGAATCACACAAAGGGCAAATGGAGACCTGTCCATCCTGGCAAGGATGTGGAGGAACACGATGGGCAATTTCCACCACCCAGCCACACGAAGGGTAAGTGGAAGCCGCCAATTTCGATCTTCGAGGACGATAAGGACGAGACGAAGAACAAGCGCAGTATAATCGAGCAGACGCCGCCGTTCCGCAAATCCAATGGTAGCATTCAGTACTGGTGCAATCCCTGCAATCGCGTGCTGTCGTCGAAGATTGTCTACGAGCGGCATTTGAAGTCCGATCTGCACTTTAAGCGCATGCGGCACGAGGCCGAGTTCGACGATGGTGCGGGCATGCTGCCTAGGCGTACGTCAACGCATTTGAATACAAACCGTGATAAAGTAGCGAAGCGGACAATACGCGAACCTGTTGAATATTGGACGGGCGCAAACAATAAAGCCGCAACGAAAAATGCCGGCGGCAATGCGCCGCATAGCAGCAATGCATTGACAAGCGCACCGGCAACAATGGCAGCGCTATGCGCACCGACGACGACAATTACGCGCCCagtagtggcggcggcggcaacaccGAAGCGAATTCGCCGAAGAATCTACACCAAGTGCGTGGTATGCTTGGCGCGTGTTACCGCGCAGACGATGGGCAAACACCTAATCTCGCACTATCATTGTCGCAAAGGTGATATTCATAAGCCGGAGGCAAAGCAAATGGTCCTTGAGCACATCCATGCCATCGTCTTGCAAGCGCCATACCAATGCGCTGCTTGTAAGTTTTACTGTAACTCTCCGGAGTATTTTCTGCAACATTGGAAGTCCAGTGAGCATATTGCGAATGTTGAAAGTGTGGATGGCGTACTTACGTGCTCCTTCTGTAAGTTTAAATGCGCATCGAGCGCGAATTCAGCTATGCACCGCCATCTCGTTTCGGAGGAGCACGAAGAAGTGATTTCTGTTATCAATCGCTCAGTGCCTATTATCATCAAGACCAGTTTCCCCATTAAATGTGCCACGTGCCACGAAGAATTTAccttaaatattcaattacgcAAACACTGCGCTGATAATAATCATGAATACTGCGATACCGCAACTGATGCTTATCAAAAGAAAGAGCTTTGCTTGATTTGCAAGAAGACTTTTCATTCCTCGATAGCCTTACAGCGGCATCTTCGCACACATAATACGCCAATGTTTTTTTGCTCACAATGCCAGGTGAGGTTTGCGACCAAAGAGGAAATTCAACAACATAGATTGAGCAAGGACCACAGACGCGTCGGCAATCCGAAAAAGTGTGATCACTGCCCAAACGTGTTCAACTCACCCAAAGATCTTTGTGCGCATTTGATTGAAACGCATGCCGAGGATGGCAACAAGTGTTTGACTTGTGCGCAATGTTTTACGACACCAGAAGAGTTAACTGCCCATATGGAGACCAACGCTTGTGTCAAAAGTAAGACTAATGATGGCCAACATGAGTTTCACTGTGATATTTGCAACTTTGGTTGTGCAACCGTTTCCAAGCTGCTTTTCCATAAAGCACTGCATACTGAACCTGTGCGCTCGTTGGACGTTAAGCAAGCGCATTATAAATGTCCACTGTGCGAGAAATACTTTGCCAAGACATCCTTGCTTTGCCATATTCGTAATCAGCATACCAAGGAGAAAACCTACAAGTGTAACGTCTGCGAAGCGAGATTTGGGCGGCGCAATAATTGGTTGGTCCACGTCAAAAACCATGAGCAGTCATCGCGTTCGGTGGTTACAGGCGAGAGGAACTTCTTGTGTGCCACCTGTGGTGCCAAGTTTACAAACAACGCCACATTGAAGAAGCACATGCTCATCCACAGTGGCAAGCGGTTCAAGTGCGAGCATCCCGAGTGCGGTCACAAGGCGCGGACACCTGCCGACCTCCGCGTCCACCAGAAGAGCACGCATGCGACGGCGATGAGCTATCGATGCGACCGATGCGACTATCGCGGCAAGACGATGCAGCACCTCAAGAGACATTCAAGCGTTCATGACATCGACAAGAAATATCAGTGCAATCAATGCTCGTTCACGTGCCGATTGAAGTTCCATTTGCGTCGTCATCAACGCATCCACTCTGGCGTGAAGCCGTACGCCTGTCCGCATTGCGAGTATCGATGCAATAATTTGGAGAATCTGCGCAAACATGTCTTGTCAACAAGTAAACATCCGGGCAAATGCATCTACGAATGCAAGTTTTGCAATGCGCAATTCCAGAGCAACTTTGCAAAGGATTTCAAAGCGCATTTGCTATCGGTGCACAGCGATGTCTTCGGATCGGTAACGAAAGCAACGGGTTATATTGCAGGAATATACGATTCCGTTGGCGATGTGGATGCCACTGCCGCTACCACCGCCATCGCATCCACATCAGAAGGATCAGCGGCGAGCGTCATCTACGATGCCGATGCGGCTGCTGATGGCGCACATGCAGCCGAGTTGCATAaagagaataaaattaatcccGGCATGCTCGGGTCGAACGACGCTTCCGGCGCGTCGCTAATTCAATCCCAGGAAACCACCTTCGAGCATAAGGGACCTAATGACGAGGAGCTCTTCCCCATGTACGTAATCGCCAAGGAAGAGGAGATCGTCTACGTCGACGATAAGGAGGAAGCGTGGTGCATGGTCGGCAGTTTCGGCGTGGAGGCGTCCGGCGCACTTGTCTCGTTCGACGAGGAATCCGAGACGGAACAACTCTTTGAGGAGCCGTTCCAGTAG
Protein Sequence: MISDYEDDEHFCIKCHITIHGLNNYVSHRKTNCGAVPKAIPVLPKSPPLPLLAQDESFGLKADDFFSSLELQSSSKKPAAPSTSGKTSTSGILTRSKTYAVIHATAGSSGNAQDIEPPQETKSGKNAWIGGHQLKELGSGDNQARLIKAVDNLTRSTYLNHKKEDPPATSSIVETYNDNSEEESDDYDYEDEDDDDEEPPQHHTGGKWAPNWYYQNVQHAKRKSSAEDSHTSPPNHTKGKWRPVHPGKDVEEHDGQFPPPSHTKGKWKPPISIFEDDKDETKNKRSIIEQTPPFRKSNGSIQYWCNPCNRVLSSKIVYERHLKSDLHFKRMRHEAEFDDGAGMLPRRTSTHLNTNRDKVAKRTIREPVEYWTGANNKAATKNAGGNAPHSSNALTSAPATMAALCAPTTTITRPVVAAAATPKRIRRRIYTKCVVCLARVTAQTMGKHLISHYHCRKGDIHKPEAKQMVLEHIHAIVLQAPYQCAACKFYCNSPEYFLQHWKSSEHIANVESVDGVLTCSFCKFKCASSANSAMHRHLVSEEHEEVISVINRSVPIIIKTSFPIKCATCHEEFTLNIQLRKHCADNNHEYCDTATDAYQKKELCLICKKTFHSSIALQRHLRTHNTPMFFCSQCQVRFATKEEIQQHRLSKDHRRVGNPKKCDHCPNVFNSPKDLCAHLIETHAEDGNKCLTCAQCFTTPEELTAHMETNACVKSKTNDGQHEFHCDICNFGCATVSKLLFHKALHTEPVRSLDVKQAHYKCPLCEKYFAKTSLLCHIRNQHTKEKTYKCNVCEARFGRRNNWLVHVKNHEQSSRSVVTGERNFLCATCGAKFTNNATLKKHMLIHSGKRFKCEHPECGHKARTPADLRVHQKSTHATAMSYRCDRCDYRGKTMQHLKRHSSVHDIDKKYQCNQCSFTCRLKFHLRRHQRIHSGVKPYACPHCEYRCNNLENLRKHVLSTSKHPGKCIYECKFCNAQFQSNFAKDFKAHLLSVHSDVFGSVTKATGYIAGIYDSVGDVDATAATTAIASTSEGSAASVIYDADAAADGAHAAELHKENKINPGMLGSNDASGASLIQSQETTFEHKGPNDEELFPMYVIAKEEEIVYVDDKEEAWCMVGSFGVEASGALVSFDEESETEQLFEEPFQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -