Basic Information

Insect: Aleochara curtula
Gene Symbol: L
Assembly: GCA_963978815.1
Location: OZ022222.1:4453365-4459943[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.5e-07 4.5e-05 23.5 0.6 1 23 83 105 83 105 0.99

2 18 0.088 8.9 6.8 6.0 1 23 111 133 111 133 0.97

3 18 1.1e-05 0.0011 19.2 3.9 1 23 139 161 139 161 0.99

4 18 0.00057 0.058 13.7 1.2 1 23 167 189 167 189 0.97

5 18 0.00019 0.019 15.2 0.1 1 23 215 238 215 238 0.97

6 18 1.1 1.1e+02 3.4 2.7 3 23 278 299 276 299 0.89

7 18 0.0041 0.42 11.0 0.5 1 23 351 374 351 374 0.94

8 18 0.43 43 4.7 0.0 2 23 488 509 488 509 0.93

9 18 0.018 1.8 9.0 4.8 1 23 517 540 517 540 0.93

10 18 0.015 1.5 9.3 0.5 1 23 545 568 545 568 0.92

11 18 0.00073 0.073 13.4 0.7 1 23 636 659 636 659 0.97

12 18 0.0002 0.021 15.1 3.5 2 23 741 762 740 762 0.97

13 18 1.5e-05 0.0016 18.7 0.7 1 23 771 793 771 793 0.98

14 18 6.1 6.2e+02 1.1 0.3 1 17 877 893 877 897 0.80

15 18 0.11 11 6.6 0.3 1 23 940 962 940 962 0.92

16 18 0.031 3.2 8.3 0.4 2 23 971 992 970 992 0.95

17 18 0.00015 0.015 15.6 0.2 1 23 1000 1022 1000 1022 0.97

18 18 0.0081 0.81 10.1 3.9 1 23 1029 1051 1029 1051 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.5e-07	4.5e-05	23.5	0.6	1	23	83	105	83	105	0.99
2	18	0.088	8.9	6.8	6.0	1	23	111	133	111	133	0.97
3	18	1.1e-05	0.0011	19.2	3.9	1	23	139	161	139	161	0.99
4	18	0.00057	0.058	13.7	1.2	1	23	167	189	167	189	0.97
5	18	0.00019	0.019	15.2	0.1	1	23	215	238	215	238	0.97
6	18	1.1	1.1e+02	3.4	2.7	3	23	278	299	276	299	0.89
7	18	0.0041	0.42	11.0	0.5	1	23	351	374	351	374	0.94
8	18	0.43	43	4.7	0.0	2	23	488	509	488	509	0.93
9	18	0.018	1.8	9.0	4.8	1	23	517	540	517	540	0.93
10	18	0.015	1.5	9.3	0.5	1	23	545	568	545	568	0.92
11	18	0.00073	0.073	13.4	0.7	1	23	636	659	636	659	0.97
12	18	0.0002	0.021	15.1	3.5	2	23	741	762	740	762	0.97
13	18	1.5e-05	0.0016	18.7	0.7	1	23	771	793	771	793	0.98
14	18	6.1	6.2e+02	1.1	0.3	1	17	877	893	877	897	0.80
15	18	0.11	11	6.6	0.3	1	23	940	962	940	962	0.92
16	18	0.031	3.2	8.3	0.4	2	23	971	992	970	992	0.95
17	18	0.00015	0.015	15.6	0.2	1	23	1000	1022	1000	1022	0.97
18	18	0.0081	0.81	10.1	3.9	1	23	1029	1051	1029	1051	0.97

Sequence Information

Coding Sequence: ATGCTTTTCAAAGGAAGTAAGAGTAATCGATTGGAAATGGTTATtgagaaaattcaaaattcgaaTAAGGATGTGTTGGACGCGCCAATACCAACACCTTCCGAATCAGTTGCGACAGGACAAGGCGGAAGTACGCATTCGAGTAGTTCAGACCAAGCCTCGCCGGTGAGTTCCTGTCCGAGCTCCCTCAGCGATGTCGCCGACTCGGAGGAAGCGTTCACAATGGGCGCCACCGCCACAACACCCTAcgaatgcaatatttgcaagCGGGCTTTCGCGAGGTCCTCCTTATTGAGCAAACACGTACAAACACACACAGAACAATTGCAGTTTAGTTGCCCATATTGTCGACGTTTGTTCAAACATAAGAGATCGAGGGACCGTCATACGAAACTTCACACGGGCGACAAAAAGTACAAGTGTTTGCACTGCGAATCAGCGTTCGCGCGAAGTGaccatttgaaaattcatatgaagACACATGACAACAAGAAACCACATCAATGCGAGCTATGCAATCGCGGATACAATACGGCCGCGGCACTCGCTTCCCATCAGCAGCATCATTCCAAACAGGAGCAACGACGATGCGGAAGCACGTCAAGCAGGAGCAGCGCTGCGAGCACGCCAAGTCCTGGCAGTTTTCGATGCGTGCAATGCCCGGAGACTTTCGAAAAAGCCGAAGCGTTGCAAaatcatctattagtcagtCATAAAGCGATATCAGCATCGCCAGTGCCCAGCGGGCAACCGCCGTCCATTTCGGGCCCCGACGCGGAAACCACAAACTTCATGCTCAAATCCCCGCTTGTCGACCTGCCCAAGATTGCGTGTATGTACTGCGGCAAGGATTTCCTCACCATGCACCACATGTATCAGCACATTCACGCCGAGCATCGTGCGATATTTAATAGTATCTCGCAGAATATGAGCTATGCCGCTTCGTTGCATTCgcctggcggcggcagtgtaGGAGGTATTGTCTCTGGTGCGCACGTGGAGGACTTGTCGCCAAAACAACAATCACGGACTGCGAATACGTCGCCAACGTATGCGTGCGACCGATGTACAATGCGTTTTGATTCTTCTGTTTTGTTGCAAGAGCATATCGAACATGTGCACTGGACACGTGTACGACCCGCTTCATCATTGTATAAGTACGAATATAATGAGAAGACGCTCAATAATGTGCAACAAACTACGCAGACACGGCCGACGGATTTGAGCAGGAAACGGCGATCGGACTCTGTTTCTGAATACGCCAAGAGCGAGAAGCGCAAAGTGGATGAAGcgacgccgccgacgacggGCAGTCCCTACGAAGCGAATGACAAGCCGTGTATCTGCTCGTATTGCTACGCGCAAATGCCCAACTTTAAAATGTTCCTGTTGCACATGGAGACGCACGTTGCGATGAATGCCGGCGCGCCGACTATTCCGCCGCTCAGCAGCTTTATCGCATACTGTCCGCTTTGCGGTGAGCCGGCGCGGAGCACACTTGAGTTGGGGCGGCATATTTTCGGGCATGCCATTGCCAATGTTACGGCACATTGCTGTCATACTTGTAAGAAGCCCTTTGATAAACTGGAGCCCCTTCAGAAACACTTGATGGATGCCCATTCACAGATTGTCTACAAGTGTACGATCTGTAATGAACtttttgataatgaaattggCCTTCAGATGCATTTCAGTAATAAGCACACGCCGGAATGCAAACACTATCGGTGTAATTTATGTGCCGGCAGCGAACAGGTTTTCCACGACCGCCTCACCGCTGAATTGCACGTGAATATGAAGCATAGCCTGCAAGCGCCGAATGCGCCGCCAAGTTATCACCTCGCACGCTTTCCCAGCGATCTGGTcgaacagcagcagcatcgcGCCGTCAACGATTTTGCGATCTTCCAGTGCCCATTTTGCCAGAAGATCTTCAAAGATGAATACCTGCAGTATGTACATATTCTCAAGGAGCATAACGAGGCGCGAGAGGGTGAGAGCTATTTACTCGACGCCGCATCGGCGGCGCGCCAACTGCAATACGGCAAGACGACGCCGCCCGATAAACTAAAGCATCACCACGTAGTCGACGTCAAGCCGACGAATGCGAACAATTACAATTGCGAACTTTGCAGCCGCACGGATATTGCCAGCGAAATGGAATTGGCGGCGCACAAGAAACTCCACCATTCGAAAACGAAAGTCAGCGCCGTTAGCTTGCAGTGCGCGTATTGCAATGAGCATTGTAAGTCGCGAGCCGATTTGGAGAATCACATGAAGTCGCATCAAGTAACATGCGGCAAAGGCAAACACAAATGCAACATTTGCGATGAGATCTTCACTTCGAGCGCCACGCTGGCTGAGCATAAGCTAACGCATTGCAAAATAGTCGCTGGTAATAGTTGCACGCAGTGCAAGACGCTTCTCGTCGATGAGTTGTCATTCTACAATCATCAATTGCAGCATAGTAATCACGGCGGCAACGCCAGTAGTGCGCTGACAAAAACGAACAACATACAGATATCTCTGCCAGCAAATTGTATAATATGCTGCCAAACGCTGCAAACTGATgtcgaaattaaattgcatgcGAAATTCCATTTGCGACATTCAACCGCCCAAAAGGATTTCGTTTGCGCGGTCTGCAATAAGCTATGTGATTATTCAATGGCACTGAAGCCGCATGAAAATTGTCGTGGCGTTTTAACTgttaatatttgcaaagatTGTTCCAACGCAACGAATGGCAATAGCAATAATAGAGGTCTTTATCATTCGAACAGTTTGAATTCGGCCGAGTCCAAGGAGAGAAATTTGTTTGCGTGCCTAAAGTGTCCTCAGACTTTTGGTAGTGAGGATGAGATACAAATGCACGCACATGAACATATTATGACTGAGGAGCCAAATCTAGAGTGTCACCTGTGCAGAAATGTCTTGTCGTCACCGACAAAGTTGCAAGTGCATTTAATCGAACATAATTTTATGGGTATGGGACAGTATCGGTGTTACGTGTGCTCATCAGTGTTTACAACCGCTTCCGGTTTGCGCAGTCACATCATTGGCCACGGATTAAATCATCGGCCGTATGAATGCACTCACTGCAAGATGAAATTCTATTTTGAGACTGAACTTGAGAACCACAAGTACGTACATTTACACGTTAAGTATTCGAAGAATGGTGAATTGTCCTATGATAAATACATTGAGTGCAAACAATGTTCAAATTCCATACCGGAAGCGTACCACTCGGAGCACGTTCGGAATTGCAATAATAGCAACAATGATAACTCCTACAATTCAGCgaacaatgcaaataaaacggCATCCGCCGAGACCAATGACCATTCCGCTGGTgtcaatattataaatattaaaattgaacaGAAGGATGATACGGAAATGCTAACTAACAGCAGTCAAAACAATGATATTAAATGTGAACAGAATTAA
Protein Sequence: MLFKGSKSNRLEMVIEKIQNSNKDVLDAPIPTPSESVATGQGGSTHSSSSDQASPVSSCPSSLSDVADSEEAFTMGATATTPYECNICKRAFARSSLLSKHVQTHTEQLQFSCPYCRRLFKHKRSRDRHTKLHTGDKKYKCLHCESAFARSDHLKIHMKTHDNKKPHQCELCNRGYNTAAALASHQQHHSKQEQRRCGSTSSRSSAASTPSPGSFRCVQCPETFEKAEALQNHLLVSHKAISASPVPSGQPPSISGPDAETTNFMLKSPLVDLPKIACMYCGKDFLTMHHMYQHIHAEHRAIFNSISQNMSYAASLHSPGGGSVGGIVSGAHVEDLSPKQQSRTANTSPTYACDRCTMRFDSSVLLQEHIEHVHWTRVRPASSLYKYEYNEKTLNNVQQTTQTRPTDLSRKRRSDSVSEYAKSEKRKVDEATPPTTGSPYEANDKPCICSYCYAQMPNFKMFLLHMETHVAMNAGAPTIPPLSSFIAYCPLCGEPARSTLELGRHIFGHAIANVTAHCCHTCKKPFDKLEPLQKHLMDAHSQIVYKCTICNELFDNEIGLQMHFSNKHTPECKHYRCNLCAGSEQVFHDRLTAELHVNMKHSLQAPNAPPSYHLARFPSDLVEQQQHRAVNDFAIFQCPFCQKIFKDEYLQYVHILKEHNEAREGESYLLDAASAARQLQYGKTTPPDKLKHHHVVDVKPTNANNYNCELCSRTDIASEMELAAHKKLHHSKTKVSAVSLQCAYCNEHCKSRADLENHMKSHQVTCGKGKHKCNICDEIFTSSATLAEHKLTHCKIVAGNSCTQCKTLLVDELSFYNHQLQHSNHGGNASSALTKTNNIQISLPANCIICCQTLQTDVEIKLHAKFHLRHSTAQKDFVCAVCNKLCDYSMALKPHENCRGVLTVNICKDCSNATNGNSNNRGLYHSNSLNSAESKERNLFACLKCPQTFGSEDEIQMHAHEHIMTEEPNLECHLCRNVLSSPTKLQVHLIEHNFMGMGQYRCYVCSSVFTTASGLRSHIIGHGLNHRPYECTHCKMKFYFETELENHKYVHLHVKYSKNGELSYDKYIECKQCSNSIPEAYHSEHVRNCNNSNNDNSYNSANNANKTASAETNDHSAGVNIINIKIEQKDDTEMLTNSSQNNDIKCEQN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -