Basic Information

Insect: Aleochara curtula
Gene Symbol: -
Assembly: GCA_963978815.1
Location: OZ022220.1:8041286-8043658[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.041 4.1 7.9 0.2 1 23 240 262 240 262 0.96

2 9 6e-05 0.006 16.8 1.8 2 23 351 373 350 373 0.94

3 9 0.0035 0.36 11.2 0.3 2 21 428 447 427 448 0.93

4 9 6.3e-07 6.3e-05 23.0 2.7 2 23 480 501 480 501 0.97

5 9 1.4e-06 0.00014 21.9 0.3 1 23 507 529 507 529 0.98

6 9 0.00017 0.017 15.4 4.2 1 19 535 553 535 558 0.94

7 9 2.4e-08 2.4e-06 27.5 0.6 1 23 564 586 564 586 0.99

8 9 3.1e-07 3.1e-05 24.0 2.0 1 23 592 614 592 614 0.99

9 9 4.4e-08 4.4e-06 26.7 2.4 1 23 620 642 620 642 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.041	4.1	7.9	0.2	1	23	240	262	240	262	0.96
2	9	6e-05	0.006	16.8	1.8	2	23	351	373	350	373	0.94
3	9	0.0035	0.36	11.2	0.3	2	21	428	447	427	448	0.93
4	9	6.3e-07	6.3e-05	23.0	2.7	2	23	480	501	480	501	0.97
5	9	1.4e-06	0.00014	21.9	0.3	1	23	507	529	507	529	0.98
6	9	0.00017	0.017	15.4	4.2	1	19	535	553	535	558	0.94
7	9	2.4e-08	2.4e-06	27.5	0.6	1	23	564	586	564	586	0.99
8	9	3.1e-07	3.1e-05	24.0	2.0	1	23	592	614	592	614	0.99
9	9	4.4e-08	4.4e-06	26.7	2.4	1	23	620	642	620	642	0.97

Sequence Information

Coding Sequence: ATGGAAGCAAATGAGGAGGAATTACTAGAAAATGTAACTGATGATTCAGGCAACAGTTATATGATTCAACGGATGACCGTTGACAATACTCAGTTGCTAAATTCTGACTTGCTACAAACTTCTAATGGCATTGTTGTTGATCTAGGTGGTGATTTCATACCTGTTAACTATGCTAGTGAAGAAGACTTGCTATCTCATGATATCACTGAGGAAGATAGAAACCTAGCTGCTGCACTTGTTGCAGTACAATTTAGCCACCAACagaagcagcaacaaacaCAACAAGATGGTAGTGTTATAATTAATACCTCCTTGCCTTCATTAATGTCCAGTTTTGATGGTGCAAAAGTAAGACTTGGAGAGCAACAAGTATTAGTGCAAGATAAACAAACTGGACTTATTCAAATAGTTGATGCAGAAGATCTGTATAAAGATAACTTTGCCaagtataataaaaatactgGAACATTGCAGCTTATAAAAACTGAAGATGATGAGCAAGTTATCACAACTAGTAGTACTACAAATACTAGGAAGAAGGCAGCTAAACGAATTCTTCCACATAAGAAACGTATTACAAAGAAGGTCAAGAAACCAGCAACATTTACAGAAATTCAGAAGTGCTCATTCTGTGAAGAGCTATTCACCTTAGAAAAAATAGATGATCATCAAGCTATTTGTCAAAATAATGTGACAACAGCAATCACAGCAAATGGATTTGCTTGTCAGatttgcaatggaaatttTGGTGATCAACTTTCCTTCTTTGAACACTTGAAGGCACATTATGAACCTAACAATGTTAGTGAAATGATTGAGGAAGAAATCATTAATGAAGAAAGTGAAGAGATGGAAGAAATTGTtcatgaagaaattgaagaagaagaggaggagCAAGAAGATGTGTCACCTACCGAAATAACTATCTTCAAAGAGgAGGACTTAATGCTTGAACATCCTGAAGGCACTATAATCAAAATAGAGCCCagcaatgaagaagaagaagaggatgAGCAAACAAGAGATGCATTTTTGTCTGCAATCATTCTGACATGTATGCAATGTAATAAAACATTCCGAAAACAAAAGTCTTATGAAGCGCACATGCAAGATTATCATGGCCAAACTGAATTATGTGACTTTGCGGAAGGGGAAGATGGTAATTTAATACGAATCAATATCAGTGCAGAAAAAGAACCAATTGATAGCAAAGAGTGGTATAGAGATGAGGAATTACATGCAACTGAAGAAGATCTTAAAGAATTGGAAGCCAATGAGGACACATGCCCAAATTGCCATCAACATTTTCCTGTTAGAGCAATGCTTGTGAAACATTTGATATCATGCCAGGATCCCGATGAGCCGCCGccaaaaattgtaaaaaTTAAAACGGAAGGCGGTCGCAAAAAAGGAAAGAACAAAAATTTAACGGAAAGAGAGTGCAACATTTGTGGTCGCAGATTCACTCATAAGAATTCCTTAATTTATCACATGCGAAGCCACGCGGATGAACGACCTTTTCAATGCGAGCAATGTGGCAAAAGTTTCTTTGCTGCAAGTGCACTCAAAGTGCATTTGCGACTTCACTCAGGAGAAAAACCGTACAGTTGCGATTATTGTGATAAGCACTTTAGGCAATGGGGCGATTTGAAATACCATTGCGTTTCGCTTCACTCGGATGAAAAGGAATATCAATGTGAATATTGCGGCAAAGAATTCGCCCGCAAGTACTCGTTAATTGTGCATCGCCGAATTCACACAGGCGAGAAGAATTATCGTTGTGAGTTTTGCGGTAAAACGTTTAGAGCTTCATCGTACCTGCAGAATCATCGTAGAATACATACTGGAGAGAAACCACATCCATGTGATATTTGCGGAAAGCGATTCCGTGTCCGGTCTGATATGAAACGGCATATGCGAACTCATACCAACCGACGTGGAAAGAGTCCAAATCTTGGAACAGCTCAAGTTAAAATAGAACCACATGTACTTCAACAAGAATCTGAAGATACTAGTGAGTCAATGACTCTAATGAAGGAGGAGCCCGAGAGTGCCGTTCAAACTTTGGAGTATGAGTCGGAAACCGCTTTGGATTCGATACGAGATCCAAATACGTTATATGTCCAAATGCCTGTGCTGATAACGTAA
Protein Sequence: MEANEEELLENVTDDSGNSYMIQRMTVDNTQLLNSDLLQTSNGIVVDLGGDFIPVNYASEEDLLSHDITEEDRNLAAALVAVQFSHQQKQQQTQQDGSVIINTSLPSLMSSFDGAKVRLGEQQVLVQDKQTGLIQIVDAEDLYKDNFAKYNKNTGTLQLIKTEDDEQVITTSSTTNTRKKAAKRILPHKKRITKKVKKPATFTEIQKCSFCEELFTLEKIDDHQAICQNNVTTAITANGFACQICNGNFGDQLSFFEHLKAHYEPNNVSEMIEEEIINEESEEMEEIVHEEIEEEEEEQEDVSPTEITIFKEEDLMLEHPEGTIIKIEPSNEEEEEDEQTRDAFLSAIILTCMQCNKTFRKQKSYEAHMQDYHGQTELCDFAEGEDGNLIRINISAEKEPIDSKEWYRDEELHATEEDLKELEANEDTCPNCHQHFPVRAMLVKHLISCQDPDEPPPKIVKIKTEGGRKKGKNKNLTERECNICGRRFTHKNSLIYHMRSHADERPFQCEQCGKSFFAASALKVHLRLHSGEKPYSCDYCDKHFRQWGDLKYHCVSLHSDEKEYQCEYCGKEFARKYSLIVHRRIHTGEKNYRCEFCGKTFRASSYLQNHRRIHTGEKPHPCDICGKRFRVRSDMKRHMRTHTNRRGKSPNLGTAQVKIEPHVLQQESEDTSESMTLMKEEPESAVQTLEYESETALDSIRDPNTLYVQMPVLIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00084056;
90% Identity: iTF_00084056;
80% Identity: -