Acur007541.1
Basic Information
- Insect
- Aleochara curtula
- Gene Symbol
- znf711
- Assembly
- GCA_963978815.1
- Location
- OZ022219.1:6204412-6207044[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 3.2e-05 0.0033 17.7 0.3 1 23 118 141 118 141 0.97 2 15 1.5e-05 0.0015 18.7 5.3 1 23 163 186 163 186 0.97 3 15 2.1e-05 0.0022 18.2 0.3 1 23 237 259 237 259 0.98 4 15 5.4e-05 0.0054 17.0 0.3 1 23 265 288 265 288 0.94 5 15 9e-06 0.0009 19.4 2.8 2 23 307 329 306 329 0.97 6 15 6.7e-06 0.00068 19.8 2.2 1 23 378 400 378 400 0.98 7 15 0.00074 0.074 13.4 0.7 1 23 406 428 406 428 0.96 8 15 0.00018 0.019 15.3 2.6 1 23 433 455 433 455 0.97 9 15 3.5 3.5e+02 1.8 0.1 2 23 464 485 463 485 0.85 10 15 1.3e-07 1.3e-05 25.2 1.2 1 23 492 514 492 514 0.98 11 15 1.2e-05 0.0012 19.1 1.6 3 23 526 546 524 546 0.92 12 15 9.9e-05 0.0099 16.1 5.7 1 23 552 574 552 574 0.99 13 15 4.8e-06 0.00048 20.3 1.8 1 23 580 602 580 602 0.96 14 15 8.5e-08 8.5e-06 25.8 0.2 1 23 608 630 608 630 0.99 15 15 0.0002 0.02 15.2 0.1 1 22 636 657 636 660 0.91
Sequence Information
- Coding Sequence
- atGGAAAACATTTGCAGATCTTGTCTGAAAGTGGatcaacaaatgaaaaatatctTTGATGATCACGATGGAAGACTAATACAAATGATTAAAGACTGCACGTCCATAAGAGTGACTGCCACTGATGGCTTACCTAATTCCTTATGTATTGAGTGTGAAGATAAACTGCAATCTGCACACAATTTCCGAGagttattcaaaaataatgaTCAAGCACTTAGATCCCATTTAAATGTTGCTATTAAGAGAGACCAGGATGAAGAAGAGGATGCAGATATGTTCGATCAGACTTCGCAGGATGGGGATCTGGATGGTGTTGGTCCTGAAACTGAGGATCTTAAGCCAGCAAAgtataaatgtaataaatgccCAAAGGTCTTCACATCTGGAAGGGCTTTGGGTGCACATAGGCAAAGAGGACACagtgatgatgaggatgatgattCCGATTTTGATGCAGTTGCATTTATTGCAAAGAATAAGACTTATCAGTGCTCTCATTGTGAGATGAAGTTTTCTAGGCAGCATTTGCTCCTCAAGCACCAGAGAGAAGACCATTTAGAGATTACACTCAAGGAGAGTATAAAATCGGAGCCACAGGAGTtggaagatgatgaagatgaggatgatgatgatgatgaagaagatgatgatattGATGAAGATGCACTTGAGGATGATTTAGAGAAAGATGGAGAAGTTAAGGAATATCCTTGTGAATTATGTGAAAAAGTACTGAAATCAAAATCTGGTCTGAATCTGCATTTGAAACGCCATACAAAAAAGAAAGCATATTTATGCAACATTTGTGATAGCACATTTATTAAGATTAGTGATTTGAAGAAACACATGACTGTTGCTCATGGAATGGATGCATCCTCAGAAGATTATAAAGTTTCACATAAGAAACGTGAAATGCAATGCGAATTCTGTGatagaaaattcaaatataaaaagaGCTTTACACAGCATATGCGAATCGAACATGGAATTGATGTGGATGAAAGCGATTTAGTGGTAGCACCGATAGTtaaacgacgacgaagaactATGAACGATAGTAGGAGTGGAGCAGACGACGATATTGAAGACTTTGACGATGATTTGGATGAAAGTGGAAAATCACGTACTTACCCATGTCACGTTTGTGGATCGGAATTCAATCGATCGAATCATCTTTCCAAACACATGATCATTCATCGTGATGTTTTAACGCACAAGTGCGATAAATGCGAGGAAGCATTCATGTCAGATGATCTGCTGCAAAAACATCTTGCGCAACACGTGGACAAGCCGTATAATTGTTTCGCATGTAGTAAAACATTCGTACGTGGAGAGCATTATATTCGCCATATTAGGACTCATGATATTGAAGATAACAAGATTCTTCAATGTCCTGTATGTTCTGAAGATCATGAAGGACTTGAAATGTTAGCAAATCATGTTAAGAGCCATTTATCAAAAGAGAAACGACATACATGTATGCAGTGCGGTAAGGCGTTTATTCGCGCGGATAACTTGAAGACGCACATGAAAGTACACACTGGTGCAAAGGATATAcctaaattacatttatgtaTCTATTGTGGTAAAGAATTTAACAATTCAAGTAATATGATTGTTCATATGAGACGTCATACAGGCGAAAGGCCCTACAAATGCAAACAATGCGGTAAAGGTTTTCCCAGATCGCATGACCTTAAGTGCCATGAGCGTACGCACTCTGGCGAGAAGCCCTACTTGTGTACTTTATGCGGTAAATCCTTTAATAAAAGCAACAAATTGTTGCGACATACACGAGTCCATACGGGTGAGCGCCCATATGTGTGCTCAATTTGTGGTCGTGGATTTACTCAATCGAATGATTTGGCATTGCATATGCGAAGACATACGGGAGCACGACCGTATGCATGTGGTGTTTGTTCAGCACGCTTCATTCAATCAGGACAACTCAAGGCACATCAACGTGCTAAGGGACATTGGATTGAAACAGCGCCAGATCTCAAAGGGAGCTATCGGGTAGAACCAGTGATTAGTTGCGGAGAATCAAAGCCAATTCGGTTTAGACGAAACGCAGCCGGTGAGAAGTACCAGCCACCGCAGTTTGATGATAAGAATCCACCTCCATTAGCTACGAATAATACGGAGCATAATGTcataacaaacgtttcaatcaATCCAAACCAGACTAAGGTACTACTTCTGCAGGCTTATGAACCGTACACGGAGGGATATGTGGCTGGAACGGTGTTAAAGGTACAAAACGACGGGCTGGATGTGGTGCATGCCACCGGCACAACATTCCAAGATGATTCGCAGGGGACTGATAGTAATGCGACTACGTTTACGACGGCCGAAACCGGTAGCTACGAATGCCGTACTTGTCTTTAA
- Protein Sequence
- MENICRSCLKVDQQMKNIFDDHDGRLIQMIKDCTSIRVTATDGLPNSLCIECEDKLQSAHNFRELFKNNDQALRSHLNVAIKRDQDEEEDADMFDQTSQDGDLDGVGPETEDLKPAKYKCNKCPKVFTSGRALGAHRQRGHSDDEDDDSDFDAVAFIAKNKTYQCSHCEMKFSRQHLLLKHQREDHLEITLKESIKSEPQELEDDEDEDDDDDEEDDDIDEDALEDDLEKDGEVKEYPCELCEKVLKSKSGLNLHLKRHTKKKAYLCNICDSTFIKISDLKKHMTVAHGMDASSEDYKVSHKKREMQCEFCDRKFKYKKSFTQHMRIEHGIDVDESDLVVAPIVKRRRRTMNDSRSGADDDIEDFDDDLDESGKSRTYPCHVCGSEFNRSNHLSKHMIIHRDVLTHKCDKCEEAFMSDDLLQKHLAQHVDKPYNCFACSKTFVRGEHYIRHIRTHDIEDNKILQCPVCSEDHEGLEMLANHVKSHLSKEKRHTCMQCGKAFIRADNLKTHMKVHTGAKDIPKLHLCIYCGKEFNNSSNMIVHMRRHTGERPYKCKQCGKGFPRSHDLKCHERTHSGEKPYLCTLCGKSFNKSNKLLRHTRVHTGERPYVCSICGRGFTQSNDLALHMRRHTGARPYACGVCSARFIQSGQLKAHQRAKGHWIETAPDLKGSYRVEPVISCGESKPIRFRRNAAGEKYQPPQFDDKNPPPLATNNTEHNVITNVSINPNQTKVLLLQAYEPYTEGYVAGTVLKVQNDGLDVVHATGTTFQDDSQGTDSNATTFTTAETGSYECRTCL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00084041;
- 90% Identity
- iTF_00084041;
- 80% Identity
- -