Basic Information

Insect: Aleochara curtula
Gene Symbol: -
Assembly: GCA_963978815.1
Location: OZ022217.1:4845753-4850931[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.00014 0.014 15.7 1.8 1 23 36 59 36 59 0.93

2 27 0.031 3.1 8.3 1.0 1 23 192 215 192 215 0.93

3 27 0.078 7.8 7.0 0.7 3 23 224 245 222 245 0.84

4 27 0.018 1.8 9.1 0.8 3 23 278 298 277 298 0.98

5 27 0.082 8.2 7.0 0.1 1 23 303 326 303 326 0.96

6 27 0.005 0.51 10.8 0.0 3 20 335 352 333 354 0.91

7 27 0.0079 0.79 10.1 0.2 2 23 660 681 659 681 0.94

8 27 3.4e-05 0.0034 17.6 0.7 3 23 788 809 787 809 0.94

9 27 0.0013 0.13 12.6 0.3 2 23 815 836 814 836 0.97

10 27 0.00054 0.054 13.8 2.0 1 23 842 864 842 864 0.99

11 27 0.00016 0.016 15.5 3.7 1 23 870 893 870 893 0.96

12 27 0.00079 0.079 13.3 0.2 1 23 898 920 898 920 0.98

13 27 6e-05 0.006 16.8 1.0 1 23 928 950 928 950 0.99

14 27 0.0083 0.84 10.1 2.0 1 23 955 977 955 977 0.97

15 27 0.0023 0.23 11.8 1.8 1 23 983 1006 983 1007 0.96

16 27 0.0011 0.11 12.9 1.9 2 23 1012 1033 1011 1033 0.96

17 27 0.00075 0.075 13.4 0.2 1 23 1040 1063 1040 1063 0.97

18 27 0.012 1.2 9.6 0.2 1 23 1088 1110 1088 1110 0.97

19 27 0.0023 0.23 11.8 0.0 1 23 1127 1149 1127 1149 0.98

20 27 0.00017 0.018 15.4 1.1 1 23 1217 1240 1217 1240 0.96

21 27 3.9e-05 0.0039 17.4 0.4 1 23 1246 1268 1246 1268 0.98

22 27 0.35 35 5.0 0.8 2 21 1277 1296 1276 1297 0.93

23 27 0.00013 0.013 15.7 0.2 2 23 1304 1326 1303 1326 0.95

24 27 0.27 27 5.3 0.8 3 23 1332 1352 1331 1352 0.96

25 27 0.00083 0.083 13.2 0.0 1 23 1371 1393 1371 1393 0.98

26 27 5.1e-07 5.2e-05 23.3 0.6 1 23 1399 1421 1399 1421 0.98

27 27 0.0011 0.11 12.8 6.2 1 23 1427 1450 1427 1450 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.00014	0.014	15.7	1.8	1	23	36	59	36	59	0.93
2	27	0.031	3.1	8.3	1.0	1	23	192	215	192	215	0.93
3	27	0.078	7.8	7.0	0.7	3	23	224	245	222	245	0.84
4	27	0.018	1.8	9.1	0.8	3	23	278	298	277	298	0.98
5	27	0.082	8.2	7.0	0.1	1	23	303	326	303	326	0.96
6	27	0.005	0.51	10.8	0.0	3	20	335	352	333	354	0.91
7	27	0.0079	0.79	10.1	0.2	2	23	660	681	659	681	0.94
8	27	3.4e-05	0.0034	17.6	0.7	3	23	788	809	787	809	0.94
9	27	0.0013	0.13	12.6	0.3	2	23	815	836	814	836	0.97
10	27	0.00054	0.054	13.8	2.0	1	23	842	864	842	864	0.99
11	27	0.00016	0.016	15.5	3.7	1	23	870	893	870	893	0.96
12	27	0.00079	0.079	13.3	0.2	1	23	898	920	898	920	0.98
13	27	6e-05	0.006	16.8	1.0	1	23	928	950	928	950	0.99
14	27	0.0083	0.84	10.1	2.0	1	23	955	977	955	977	0.97
15	27	0.0023	0.23	11.8	1.8	1	23	983	1006	983	1007	0.96
16	27	0.0011	0.11	12.9	1.9	2	23	1012	1033	1011	1033	0.96
17	27	0.00075	0.075	13.4	0.2	1	23	1040	1063	1040	1063	0.97
18	27	0.012	1.2	9.6	0.2	1	23	1088	1110	1088	1110	0.97
19	27	0.0023	0.23	11.8	0.0	1	23	1127	1149	1127	1149	0.98
20	27	0.00017	0.018	15.4	1.1	1	23	1217	1240	1217	1240	0.96
21	27	3.9e-05	0.0039	17.4	0.4	1	23	1246	1268	1246	1268	0.98
22	27	0.35	35	5.0	0.8	2	21	1277	1296	1276	1297	0.93
23	27	0.00013	0.013	15.7	0.2	2	23	1304	1326	1303	1326	0.95
24	27	0.27	27	5.3	0.8	3	23	1332	1352	1331	1352	0.96
25	27	0.00083	0.083	13.2	0.0	1	23	1371	1393	1371	1393	0.98
26	27	5.1e-07	5.2e-05	23.3	0.6	1	23	1399	1421	1399	1421	0.98
27	27	0.0011	0.11	12.8	6.2	1	23	1427	1450	1427	1450	0.96

Sequence Information

Coding Sequence: ATGGGAGCCAAGGAAGAGCTTGACACTAGACACTTTCGTTTTATGCAAGCGCAATGCTATACGAATACTAACGAGAATAATGATTGCCAAATGCCGCGAAAGAAATACAAATGTGTCGAATGTGATGAGAGGTTTCGTCATCGCAACCTGCTCATGAAACATGTTGAGGAGAAGCATGGGGGTGATGATTTAAGTGATGAAAGCGATGAAGTTTATAGTTCTACCGAATCATATCGTCCGGACGATGATGAAGTTGAAGAATGCGATGATAAATATGAGGAATACGATGATAAATATGATGAATGCCATGATAAATATGATGGTATTGAAGAGGAGAATACTGAAGTTGGCGTGGAAGACGAAGATGAtattgaaaatgttgaaaacagCGATTCCGGGGAGGAAGATATTGATAATGATATTTCAGTGATTGGTGCGACGGCAAAAGTGCAAGAAGAAGATTCTTCTAACATTGATgttaatttgcaaacaaaatttgtGTGTTTTAAATGCTTTGACAAATTTGACTCGAAGATAGTTGTGCGCGAACATTTGCTTTCTAGACATGATTATCATTCTTGCGAGTCTTGCTCTCAAGTTTTCAGTACGCTTAGTGATGTATTGATACATTTCTCAAAAGTTCATAAAGGCCTGAAAGGCAAGTGGAGGTGCATCCAATGTAAGACATCCTTCGCGCACCAAGATGATCTTATTGAACACAATCTTGAAAAACATAATCTGCTTTGTCGatcatgtaataatttatttacaagtgTATTTAAATTGACTTATCACAAAAGCAAAGCTCATGGATTGCCATTGAACATCCTTTGTGATTATTGTGGCTGTACAACAATGTCGCCAGTTGATTTGAAATATCATAAGATGATACATTTTGCCAAACCCTATAATTGCGAATTGTGCTCCAAGACTGTTTACGGAGAGGGCAATTATGTGAATCATGTGCTACGAGAACATCTTGCGTCTGAAGGAAAAATGATATGCGGGACGTGCAATAAAGAATTCGCCACCGCGCGCGAACTAATAAATCACGAGGAAACCTGTGAAAAGTTGTCTGAAGAAGAATCTGATGTATCCTCAGATTCTTTTACAGAATCAAGCTTCTTGCCAGAACCGGAACAGAGTCAATCGCCATATCCTCGCGAACCGAGTCGCTCCGCAACTCCTCTACGAGAACCGAGAATTGCTTTTCACGGAGGAAGAAGTAATACTCGAGTTATAGAGGACAAAACTAACGATGAATCAATTCCTATTCCAACAATTTCTATAACTTCTGAACCTGCTGCAGGTAACTCGCGGAATATAAGTATAGAAACAACTATAGAGGTTCCATCTACCAATACAGAGTCTATTATATTAGATACTAGGAACACAACTGGTAAAGGTACAGACCCAAATATTGGAAAATCATCTGAAGAGGCTCAATATCTGATGATTGGTGATAAACGCGTGCTTATTATGCCCGGTTTCAAAATACAGTCCACGCCAACAATGAAACCTTCCACAATAAAGCAGACAATTTGTGTTCCCAATAATGCGAATACAAACTCTGGGATAAATATAACTAATAACACCATATGCACCaccaatattattaaattgccaCTAGAGCAATACCGGCATATTATACCGACTATGAAGCCATGCACAATTACTAATGCAACTAAATCGTCTAACGTCGATGACTTTGTGATATCTAAAGAAAATATAGTGGAAGAAGAGGTTGATCGTAATACTGAAAATCGACCGAAAATATTTCTTAAGCCTATAAGTTCGCTAGTAGACAATAATACACCACCTCCATTGCGTATGCTTTCTCCAAAAACGGAAAATAGGATTCTCACAGATGTAGATTCACACGCGTCGTCGAATATACTTGAACGAATTATAGAACGTAAATTGGGAAATATACAGGTCCTTGAACTTCCGCCTGATAAACCGGCAGATATTAATCTGAATTGTGCTGAATGTGattcaatattcaataatttgaaAGATTTAGCTAGGCATCGAACCAATCATAAATGTAAAGTTTGTGAGATAATATCTACTGGTGCACAATGCGGTGACGACGAAACTGTATTAATTGATACGACCGACGGGCCTAAGCGTGTGCCAAAGAAGTTTGTTGTTATCTCACCGGATGTTCAAGAGAAAGTAACAATTCATACCAAAGATGGGCGTACCATTCCATTAGTTTTGAAGTCATTGCCGATTGTATTTAAGAAGAACGTGGTTGAACGTAGCAATACGAAGACTCTTATGTTGCACAAAGTGCAAGCTGGGGTAGAAGAACAGGACGAGTTACCGGTCCGGAGCAACGGCAGGGAGTCGCGTCCCTGTGAATTTTGCGGCAAACGCTTCTATCAATTGTCGAAATTGAAAAGGCACGTGGATCGTGTTCACGTTGAACGTGATCTTAAATGCCCGCTTTGTCAAATGAAGTTTATATACGAGATATTATATCAGGCTCATTTGAAAACGCACGAAGTTGATAAAAAGTACGAGTGTAATTATTGCAGTCGCAAAATTCAATCGCGACGAATGTTAGAGAGTCATATGCGACGACATACGGGCGAATATGAGCATAAATGTGAAGACTGTGGCAAGGAATTTTTTTCAGACGACTCTTTCAGGCATCATCAGCGTGCCGAGCACGAAGGTATTCGTTATCCTTGCGAAGTTTGCGGCTCAGTGATAAAGAGCAAGCGTTACTATACGGAACATATTAGAATGCATGAAAAAAAGGATCCAAAAACGTATAAATGCGATATTTGCCTTAAATATTACAGTACAAAAAGCGCGTTAAATGGTCATAAACGTATTCACTCTGGGGTGCGCTATATTTGTCACATTTGCGGTAAAAAGTCTATCCAGAAAGGAGCACATAACGTACATCTAAAAATGCACACGGGAGAAAAGTCATTTATATGCGAATTGTGTGGTCAAGATTTCTTGAGAAAAGATGTTTTGTGTGCACATATGCGACGTGCTCATCATGTTGGGGAAATATCCTGCATGAAATGCAAGGAAGTGTTTCGCAGCATGTATCAGTTGATGATACATCTTCATACGCATAGTGATGTCGAGAAACCCTTTCCTTGTGAATTATGCGATGAACGATTCATTGATCTCAATTTCTTACGAAGTCATGTGAATAAAGTCCACATAGAGAGTAATGATAAATCACCACCTCCACTACCCAAATTCAAGCGGAAAACTGTTAATGGAAAGGCTGTTTATGtttgtaatatttgtaaaGCAACGTATCCTAACGCGCTCGAAATGCGCACTCATTTTGATACCCATCAAGTTGAAACTGAAGGGGTGGATGAGTCAATTGTTTTTGAAGAAGCTTATCAGTGTCAATATTGTACAGAGACATACTCTACAATTCCGGAAATTGAAGCACACATAGCTGTGCATGAGGAAAAAGGAGATACACTGCCAGAAGCGGCAATAACTGAAGCTAAAGATGAACAAAATCTTTATACGGTGTTTGAAGACTGCCCGCCTGTTGTTATAATTGAACATCGGCAATGTAATCAAAAgGCTGTTTTTAACACAAAAAGTAGCCAAGCGGGCGTTGAAGCCTATTTAGATACGATATCCTGGACGGATAAGCACTTTGAGTGTCCAGTTTGCGAACGCGCTTACACTGCGAAGCATTCTTTGAAGATGCACATGTATAAGGATCATGTGTTTGATCGCCAATTTGAGTGCACAATCTGCAAGATGAAGTTCGCTTTGCAATATTTGCTCAACGCACACATGAAAGGTCACGCGGAGAAGCCGAAAGAAGTATTGAAATGTCCAAAATGCCCATTTACGTCTGTATATGAGACGAGTATAAAGAAGCATCTTTGTATCGACACGCAAAGAAATTTAGTTTGTGATTCTTGCGGGAAGACATTTTATCTTAAAGCAAGTCTACGAAGTCATATTGCGAAAGTTCATGGGGGCACCAAATTTTGCGAACTATGCGGTGTGGTTTGCGAGAATGAATACAGATATAAGTATCATATGGATTTGCACACCGGTCGACAAGCACAGAGAATTATTAAGCGCAAAATGGCAAAGCGGAAAGAGTTTGTATGCGCGCAATGCGGGAAGGTGCTCATCACAAAAGTTGGCTATGTGGAGCATATGAACATTCATTATGGAATTAAACCCTTCTCGTGCAAAATATGTGATAAGGATTTTACAACACGTCCACAACTGGTGGTTCATCTACGAACACATACAGGAGAGAGACCTTACGTGTGTAAATTTTGTAACCAGGCATTTACCCAAAAACATTGTCTAACAAGCCACTTGGCTAAAAAACATAGTGATATCCAGGAAACCCTAACCGATGAAAAATCAATGATTCTAAAAATctga
Protein Sequence: MGAKEELDTRHFRFMQAQCYTNTNENNDCQMPRKKYKCVECDERFRHRNLLMKHVEEKHGGDDLSDESDEVYSSTESYRPDDDEVEECDDKYEEYDDKYDECHDKYDGIEEENTEVGVEDEDDIENVENSDSGEEDIDNDISVIGATAKVQEEDSSNIDVNLQTKFVCFKCFDKFDSKIVVREHLLSRHDYHSCESCSQVFSTLSDVLIHFSKVHKGLKGKWRCIQCKTSFAHQDDLIEHNLEKHNLLCRSCNNLFTSVFKLTYHKSKAHGLPLNILCDYCGCTTMSPVDLKYHKMIHFAKPYNCELCSKTVYGEGNYVNHVLREHLASEGKMICGTCNKEFATARELINHEETCEKLSEEESDVSSDSFTESSFLPEPEQSQSPYPREPSRSATPLREPRIAFHGGRSNTRVIEDKTNDESIPIPTISITSEPAAGNSRNISIETTIEVPSTNTESIILDTRNTTGKGTDPNIGKSSEEAQYLMIGDKRVLIMPGFKIQSTPTMKPSTIKQTICVPNNANTNSGINITNNTICTTNIIKLPLEQYRHIIPTMKPCTITNATKSSNVDDFVISKENIVEEEVDRNTENRPKIFLKPISSLVDNNTPPPLRMLSPKTENRILTDVDSHASSNILERIIERKLGNIQVLELPPDKPADINLNCAECDSIFNNLKDLARHRTNHKCKVCEIISTGAQCGDDETVLIDTTDGPKRVPKKFVVISPDVQEKVTIHTKDGRTIPLVLKSLPIVFKKNVVERSNTKTLMLHKVQAGVEEQDELPVRSNGRESRPCEFCGKRFYQLSKLKRHVDRVHVERDLKCPLCQMKFIYEILYQAHLKTHEVDKKYECNYCSRKIQSRRMLESHMRRHTGEYEHKCEDCGKEFFSDDSFRHHQRAEHEGIRYPCEVCGSVIKSKRYYTEHIRMHEKKDPKTYKCDICLKYYSTKSALNGHKRIHSGVRYICHICGKKSIQKGAHNVHLKMHTGEKSFICELCGQDFLRKDVLCAHMRRAHHVGEISCMKCKEVFRSMYQLMIHLHTHSDVEKPFPCELCDERFIDLNFLRSHVNKVHIESNDKSPPPLPKFKRKTVNGKAVYVCNICKATYPNALEMRTHFDTHQVETEGVDESIVFEEAYQCQYCTETYSTIPEIEAHIAVHEEKGDTLPEAAITEAKDEQNLYTVFEDCPPVVIIEHRQCNQKAVFNTKSSQAGVEAYLDTISWTDKHFECPVCERAYTAKHSLKMHMYKDHVFDRQFECTICKMKFALQYLLNAHMKGHAEKPKEVLKCPKCPFTSVYETSIKKHLCIDTQRNLVCDSCGKTFYLKASLRSHIAKVHGGTKFCELCGVVCENEYRYKYHMDLHTGRQAQRIIKRKMAKRKEFVCAQCGKVLITKVGYVEHMNIHYGIKPFSCKICDKDFTTRPQLVVHLRTHTGERPYVCKFCNQAFTQKHCLTSHLAKKHSDIQETLTDEKSMILKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -