Acur004891.1
Basic Information
- Insect
- Aleochara curtula
- Gene Symbol
- Znf639
- Assembly
- GCA_963978815.1
- Location
- OZ022217.1:4835209-4840096[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 0.53 53 4.4 0.1 2 23 38 59 38 59 0.94 2 29 0.0097 0.97 9.9 4.9 1 23 65 87 65 87 0.97 3 29 0.00012 0.012 15.9 0.3 1 23 120 144 120 144 0.99 4 29 0.00094 0.094 13.1 0.2 1 23 159 182 159 182 0.98 5 29 0.0016 0.16 12.3 2.8 2 23 191 213 190 214 0.96 6 29 0.0078 0.78 10.2 0.3 2 23 219 239 218 239 0.96 7 29 0.011 1.1 9.8 0.1 2 23 245 266 244 266 0.96 8 29 7.5e-05 0.0075 16.5 0.3 1 23 272 294 272 294 0.97 9 29 0.00018 0.018 15.3 0.1 1 21 300 320 300 321 0.94 10 29 0.003 0.3 11.5 0.1 1 23 398 420 398 420 0.97 11 29 0.048 4.8 7.7 2.2 1 21 424 444 424 447 0.86 12 29 0.025 2.5 8.6 0.8 2 23 452 473 451 473 0.96 13 29 0.13 13 6.3 3.0 2 23 481 504 480 504 0.93 14 29 0.0039 0.4 11.1 0.0 1 23 510 533 510 533 0.95 15 29 0.0006 0.061 13.7 2.7 1 23 544 567 544 567 0.95 16 29 0.00019 0.019 15.2 2.4 1 23 572 594 572 594 0.93 17 29 3.4e-05 0.0035 17.6 0.6 2 23 600 621 599 621 0.95 18 29 0.00037 0.038 14.3 2.6 1 23 627 649 627 649 0.97 19 29 0.057 5.7 7.4 0.1 1 20 655 674 655 676 0.90 20 29 0.0022 0.23 11.9 3.2 1 23 721 744 721 744 0.94 21 29 1.4e-05 0.0014 18.8 0.4 1 23 748 770 748 770 0.98 22 29 0.18 18 5.9 0.1 1 21 776 796 776 797 0.95 23 29 0.0028 0.28 11.6 0.8 1 23 805 827 805 827 0.96 24 29 5.4e-06 0.00054 20.1 0.3 1 23 833 856 833 856 0.97 25 29 0.0021 0.21 12.0 5.6 1 23 866 888 866 888 0.97 26 29 0.0017 0.17 12.3 0.5 2 23 894 915 894 915 0.97 27 29 0.00016 0.016 15.5 0.5 1 23 921 943 921 943 0.98 28 29 7.8e-07 7.9e-05 22.7 2.9 1 23 949 971 949 971 0.98 29 29 0.002 0.21 12.0 0.9 1 22 977 998 977 998 0.93
Sequence Information
- Coding Sequence
- ATGACGGGCCTGCCGTTGACGAGGGAGCAGCTCACTGTGCATTACAACAACGATCATAAAACGCGCAAATTCAAGCATTCACCTATTAGCAAATTCATCAATGTGACACCCGTGTGCGAATTGTGCATGGAGGAGTTTCAATCTTACAAAGAGCTCAACGATCACCTCATCGAACACGCGCATCAAGAAGTGCACAAATGTGCTCACTGTGACCAAACATTTGCGacaattgtgtattttacgaTGCATCAATTCAAGCATAGCGTACAGCCAAAATGTGAAATATGTGCAGAGAAAATTAAGAAGAAAGTTAATGTGATTCCACATTACGGGAAGCATGGCGAGCATTATAAGCCGTATAAATGTGACGAGCTCAATTGCAATAAACGCTTTCCAGCTCCCGAATCGCTCAAATCACACGCGAAAACGCATAAGAAGAAGACGGTCAAAGTAAAGTCTGACGCTCCTGTTAGATTCCAATGTGAGAAATGCGCATTATTCTATGCTACGCCTTGGTATTTAAAAACGCACTTGGAGACAGTGCATAAAGAAGTTGCCTACAAGGATATGCAATGCTCGATATGCAGTAAAATGTGCAAAGGGGAAGCAGCCCTTAAGAGGCATGAGCGACGTGCTCATCACACCCCGCATCAAGTGTGTGATATTTGTGGAAAGAGTATCAAAGCTTCACAGATGAATTTACACCAAATGCGGCATGGTGATAAAACTTTATCGTGCCAGTTTTGCGAGAAAATGTTTGCCATCAAAATGGCACTAGTAGAGCATGAACGTATCCATAATGGAAAAAAGCCTTATCCTTGCAAGTTTTGCGGGAAAGGATTTTCACAAGCTGGTAGCAGACGTATTCATGAACGATTGCACACCAATGAACGGCCATATGTTTGTGAATTGTGTGGTAAGGCATTTACCTCAGGAGGTATGCTCAATGTGCACAAAAAGAAATGTATTCCTAAggACTCGAATCAATTTGGAAGTAGAAAGACTAACATTAGAACTGCAGTCGAAATTGGAAGAAAGTGCAAGCGACCAAATGATAACACGAAATTCTTCTGTTTTCTGTGCAATGTGGGTACTGCAATGCGTGCGCCTGAATTAGCAAATCATTATGCAAATAATCATCCGAATGATCGAACTTTGTATCGCAAGATTGAAGACTTTGTGAAACTTTCTTATATGTGCGACGTGTGTGGATCTACATTCGAAACCACAATGCAATTGGATGAGCATTTAAATGATCACGATTTCCAACATAAATGTTCTTATTGTGAGAAAGAGTTTAGAAAGACTTTAGAGTATGCCATGCATCTGTTCGATGAACATACACAGGCACTAAAGTGCGAATTGTGTACTTCTGTTTTGAAGACACGAAAAGGTCTTCAGAATCATTATGCAAAGCACTTGCCAAGTATGAATCCATTTTTATGCACGCATAGGGATTGCAATCGAAGATTTTCATTGCTGATCTTGTACAATGACCACCTCAAAAGGCATGCAGGAGTTCGTAGCTTTCAGTGTGAGATATGTGCAAATACTTATATTACAGCGAATGATTTAAAGTCGCATGTTGCAATCATACATCCTGAGAAGAAATTAGGGCATGTACCCACCTTCAAATGTAATCAGTGCGGTGAGGAGTTTAAACATATGGTCTTATTCAAACGGCATTTTGCAAGAGTTCATGGTACTAAGAATCACATTTGTGACAAGTGCGGGAAGTCATTTTCGTCTCTGTATCGATTAACAGTACATTCATCATATCATGGTGAGAAGACTATTCCATGCAAGTACTGTGACCGGAAGTTCTACCAAAAAAAAGGGCTCAGGGCACATGAGGTTACTCATACCGGTGAGAAGCCTTATCCTTGTCGGCATTGTGATAAGCGATTTGCACAATACAGTGCACGACAGACGCATGAAAGATTGCACACAAATGAAAGGCCTTACAAATGTAATGTCTGTAGCAAAGGATACACAGGACGTGCTGCAAAAAGTGCTCACCAAGATATTGATGATGTCCTGACACCAATTGTGACACTCTCAGAGGTAAAGAAGAAACGCGGAAGACCACGCAAATcagaagaagagaagaaagCATCCAAAGTAGCAAAGCAGCAGATAAAGAAAGCAAAGAGTAAAATGCATTCTTGTGATGTGTGTTCTAAGCGATTTAAGACTACTGCAATGATGAAGCAGCACATTACAAACTTCCATTCAAATATATACAATTGCAATGATTGTACTGAGTCATTTAACACGCCACTTGAGTATACAATACATATGAAGGTTCATACAGAAGATAAAAATTACCAGTGTGTGTTGTGTGATTATGAAACTGGAGTTATTGATGAGCTAAAAAACCACTTGAAGAAATGCTCAGATCGGGCGCCGCGCTTTACGTGTACCATTTGTAAAAAAGGCTTTAATGTGCGTACATGGTACTTAGAGCATGCAAATTATCACACTGGAGATAAACCCTTTGTGTGCGAGATTTGCGGCAAGGCATTCATATATTCACGTTACCTTTCGGCGCACAGATCCACGCAGCACAAGTTCAATGGCGAGGAGAAAAAACTACATCATTGCACGCTATGCGAAAAAGTTTATCAACATCGTAACAGTTTGGCAATTCACATGAATACGCATACGGGCAACGGTGCTGTTTGTGACATTTGCGGAAAGTTACTATCTAGCAAGGAAAAGTTAAAGTTCCATATGCGTATTCACAGTGGGTACAAACCCTTCAAATGCACGTACTGTGAAAAGGCGTTTATAAAGAAAACTATCCTGGTTGAACACATTCGAATTCACACTGGCGAAAAGCCTTATCGATGCGAATATTGCGGCAAATGTTTCTCGCAACGCAGCAGTATGGTAACGCATGTGCGAGGACATACTGGGGAACGACCACATGTGTGCCATTTTTGCGGCAAGGGTTTCGTTGCAAAAGCGATGCTCAATCTGCATTTTAAGACTTGCAAGGGTTACAATTATCCACCCACTAATAATGTATTGACTAACTAG
- Protein Sequence
- MTGLPLTREQLTVHYNNDHKTRKFKHSPISKFINVTPVCELCMEEFQSYKELNDHLIEHAHQEVHKCAHCDQTFATIVYFTMHQFKHSVQPKCEICAEKIKKKVNVIPHYGKHGEHYKPYKCDELNCNKRFPAPESLKSHAKTHKKKTVKVKSDAPVRFQCEKCALFYATPWYLKTHLETVHKEVAYKDMQCSICSKMCKGEAALKRHERRAHHTPHQVCDICGKSIKASQMNLHQMRHGDKTLSCQFCEKMFAIKMALVEHERIHNGKKPYPCKFCGKGFSQAGSRRIHERLHTNERPYVCELCGKAFTSGGMLNVHKKKCIPKDSNQFGSRKTNIRTAVEIGRKCKRPNDNTKFFCFLCNVGTAMRAPELANHYANNHPNDRTLYRKIEDFVKLSYMCDVCGSTFETTMQLDEHLNDHDFQHKCSYCEKEFRKTLEYAMHLFDEHTQALKCELCTSVLKTRKGLQNHYAKHLPSMNPFLCTHRDCNRRFSLLILYNDHLKRHAGVRSFQCEICANTYITANDLKSHVAIIHPEKKLGHVPTFKCNQCGEEFKHMVLFKRHFARVHGTKNHICDKCGKSFSSLYRLTVHSSYHGEKTIPCKYCDRKFYQKKGLRAHEVTHTGEKPYPCRHCDKRFAQYSARQTHERLHTNERPYKCNVCSKGYTGRAAKSAHQDIDDVLTPIVTLSEVKKKRGRPRKSEEEKKASKVAKQQIKKAKSKMHSCDVCSKRFKTTAMMKQHITNFHSNIYNCNDCTESFNTPLEYTIHMKVHTEDKNYQCVLCDYETGVIDELKNHLKKCSDRAPRFTCTICKKGFNVRTWYLEHANYHTGDKPFVCEICGKAFIYSRYLSAHRSTQHKFNGEEKKLHHCTLCEKVYQHRNSLAIHMNTHTGNGAVCDICGKLLSSKEKLKFHMRIHSGYKPFKCTYCEKAFIKKTILVEHIRIHTGEKPYRCEYCGKCFSQRSSMVTHVRGHTGERPHVCHFCGKGFVAKAMLNLHFKTCKGYNYPPTNNVLTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -