Basic Information

Gene Symbol
Csrnp2
Assembly
GCA_963978815.1
Location
OZ022219.1:6957158-6959830[+]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 9.6e-105 1.5e-100 335.4 7.0 1 218 294 504 294 504 0.95
2 3 0.062 9.9e+02 -0.7 1.2 50 74 541 565 520 587 0.48
3 3 0.76 1.2e+04 -4.3 1.9 53 67 687 701 680 710 0.38

Sequence Information

Coding Sequence
ATGTCGGATGAGACAAAGAGTGTCGAATTGGTTGTTGATTTCGAATCCCAAGAAGCAGCGTTGATCGCCGAAGAAGTATACAGTATGGGTACTTCAAGCACAAAATGTGATAACGCTGCGCGTTCGAATACTGCGGAGGAGTTTGTTGATGTCTTGGAGATTGAAGAGGAGCGAAGCGTTATTGTTAACTCTGCGTCGGAGACGCTGGCAGTGTCCGAGAGGAAAAAAGAAGAGTTTTGTGGGGGCAGAGCTAGCGACGATGACACACTGAGTATCGCTAGTGCCACTTTGAACGAAATTGTTGACAACGTCACCGGATGTAATAGTCGCAAGCccgttaatttgtttttagataatatttttgttagcGATGAACATAACCAGGCCTTGCCTGCACAAAGTACAAACGTCGATTTATCAGAAGATTCTAAATTAATGAACTATAAGGAGCCACAATCAAATGAGGAATTGCTGCGAATGTGCACACGCGAAGCGATTGACGGCGAGGATTCAGCGACTGAGAGCCTACCCGTTGAGGAATTGGGCAGCGAGGAACCCCACGATCGAAGTGACGGATCTGATTCGGGATTAGGATTAGAAATGTGTGACGATCGCCCTACAAATGATCCGCTTGTGGTCTCTGCGTCAGCGCTGGGGGAAAGTGACAGCGAAACGTCATTTCTCGATCGTTTAGAGGAGTCGACGCATCAATGCGATGGTGATAAGGGTGATGAGTTATCACTGGTCAATGCCACCAAGTTGGAGAGTGCTATAGGTGCCATCCTTGATGAAGCCAAGGCAAAGATTCCAATGAAAAGCAGTCTCAAGCGGAAGATGCTGGATGAGCCTGGCGTGTCTGATGACGAAAGCCCCAAATGCAAGAAGAAGCGCGGCATAACATTTGATAGCGTGACGGTTTACTACTTTCCGCGGACACAGGGGTTCACTTGCGTGCCTTCACAGGGCGGGTCGACATTGGGCATGGGTTCTCAGCATTCGTATTTTCGCAAATTTTCGATCGCTGAGCACGCAGTGGAGCAGCGACGCATTCATCGACAGTTATTGCAGCAATTGCGCTCAGAACGGCAAGTAACAAGTGGTTCCGGAATGGGCTCGTCGAGCGATGATAGTGATAGCGACGAAGAACCTTCGGATATTTCAGAGTCGGAGTTAGATTTGGATAATTATTACTTCTTACAGCCGGTGCCGACGCGACAACGGCGTGCGCTGTTGCGTGCGGCTGGCGTACGTAAGATTGATTCGTTTGAAAAGGACGAATGTCGGGATATTCGTACGTCTCGTGAGTTTTGCGGATGTGGATGCAAGGGATACTGTGATCCTGATACGTGTTCCTGCAGCCAGGCGGGAATCAAGTGTCAGGTTGATCGTCTGAACTTTCCGTGCGGTTGTTCGCGCGACAACTGTGGCAACTTGAGCGGTCGAATCGAATTCAATCCCGTCCGAGTACGAACGCACTTTATCCATACGCTCATGCGGCTGGAACTGGAAAAGAAGCAGAAAACGGACGAGGATACGGATAATAAGAAATGGATGGAGAACGAGCGGCTCGCATCGCCGTACTGTACCAATCCAAATGGTAGCAAACAGGACCAAAATGAAACGAAGCATCATCAGCATCCACTGCACcatcaacagcaacaacagcagcagcatcaaaAGTATAACAACAATCTGGTGCGAgacgtcaatttgaattcgCATATTGATGTGGAGCACAATGGAACATTCACGAATCTGCACTACGGTGCTCCGGGGGAGGGACCCGGACCGGGAATCATGCAGCACTCCAATCTACCAACGCGCGAGGATTCACTCGATCTGTACACGTTTCGAGAGGATTGTTACCAGGATGAACGCGATGCGATAAATAATAGCAAACACCACCAACAGCAACATCACCATGCAGCGCAACACCAACAGCATTTTCCATTACCTGTTCCGCAACCTAATTTTCACTTTGGCGCTTCGTCTGAAGTCGTCAGCTATCCGGCCGGTGCGAATCCCTACACACCCACCCCATCGAATCAATACCataaccaccaccaccaccatcatcaacagcaccaccaccaacagcagcagcagccgcatgCGGCCGCTTACGCTGGCTTCAACGATTTTAATCCGGTTTTTAATCCGTACCAACTCTATCCGCAAGACTTTGCTGTTAGTAACTCCAGTAGCGCACAAGCAATCAACAATTCTGCTACGGCTATAGTCACAAACAATTCGTcgattaatattaaatgtcATGAAGCGAGTTCTACATCATCAACAAGCAGCTTTAACAGTTTCGAACCGTTTCCAAATGACCAACAGCCATTCGGCGAGAAGGAGCAGCAGCAATACACCAATTTGAATACGGTTGGGGCCAATAATAAATCGATCGAATCGTTTTCCGACTTGCTCAATGCGCGGTACTCCGCCGGCGCCACAACGCCGACAACAAATACCTCTGCATACGCGTCTTACGAAGATCACTTCAATCATGTTCAGGAGACAACGTTGAGCGATGCGTTGACAAACACGATGACAAGCGCCGAAAAGAACATTGAGAGTGCAGAACATATTATTGTTCAGGATGAGGACATTGGAAATGAGAATTTCGGCGAGATTATTAAGAAGTCGATTGTTGAAACCGTCTCCACGTAA
Protein Sequence
MSDETKSVELVVDFESQEAALIAEEVYSMGTSSTKCDNAARSNTAEEFVDVLEIEEERSVIVNSASETLAVSERKKEEFCGGRASDDDTLSIASATLNEIVDNVTGCNSRKPVNLFLDNIFVSDEHNQALPAQSTNVDLSEDSKLMNYKEPQSNEELLRMCTREAIDGEDSATESLPVEELGSEEPHDRSDGSDSGLGLEMCDDRPTNDPLVVSASALGESDSETSFLDRLEESTHQCDGDKGDELSLVNATKLESAIGAILDEAKAKIPMKSSLKRKMLDEPGVSDDESPKCKKKRGITFDSVTVYYFPRTQGFTCVPSQGGSTLGMGSQHSYFRKFSIAEHAVEQRRIHRQLLQQLRSERQVTSGSGMGSSSDDSDSDEEPSDISESELDLDNYYFLQPVPTRQRRALLRAAGVRKIDSFEKDECRDIRTSREFCGCGCKGYCDPDTCSCSQAGIKCQVDRLNFPCGCSRDNCGNLSGRIEFNPVRVRTHFIHTLMRLELEKKQKTDEDTDNKKWMENERLASPYCTNPNGSKQDQNETKHHQHPLHHQQQQQQQHQKYNNNLVRDVNLNSHIDVEHNGTFTNLHYGAPGEGPGPGIMQHSNLPTREDSLDLYTFREDCYQDERDAINNSKHHQQQHHHAAQHQQHFPLPVPQPNFHFGASSEVVSYPAGANPYTPTPSNQYHNHHHHHHQQHHHQQQQQPHAAAYAGFNDFNPVFNPYQLYPQDFAVSNSSSAQAINNSATAIVTNNSSINIKCHEASSTSSTSSFNSFEPFPNDQQPFGEKEQQQYTNLNTVGANNKSIESFSDLLNARYSAGATTPTTNTSAYASYEDHFNHVQETTLSDALTNTMTSAEKNIESAEHIIVQDEDIGNENFGEIIKKSIVETVST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00083897;
90% Identity
iTF_00083897;
80% Identity
-