Basic Information

Gene Symbol
TRERF1
Assembly
GCA_963978815.1
Location
OZ022224.1:4939238-4954200[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.6e-09 5.5e-06 26.2 0.2 2 43 1167 1208 1166 1211 0.95

Sequence Information

Coding Sequence
ATGACAATTTTTGAGAATGAGGGTGTTCACGAACTGGCAGGGGTACGACTGCCACTTCAGCCATATGCCGGCGGGCATGCGGTGTTCATGTACAGCACCGCCGCCGACGGAAATGTTACACTGCAATTGAAGGAGCCGGACGATCTTGACCGCTCCAGTTTGGCGGCGATGCTTGCCCGCCTCCAGGATGATGCCACCTTCTCCATATCGTATCAGGATACGGATATTTTATCCGATGGCAGCATCGATGTTTTACTTGGAACTGGTTCTAATCAAACAACAGATGGCAGTGAACCAGTGACTGCATCCTTTGATTTATTCGACTCGTCCAGTGGTCCTGATTTGACACTTTCACCACAAACCTTCACGAATTCAGCTGAGGCATTCATTAATGACAATTCCAACAGTTTGGGCGTGCCCGCTGATAATGATCCAGTTTCCTCGACGGAGGACACGAAAAAACTGCAAGCGGAAGTGGTGAAACTGGCGGTGAAAAGGGCACGACCCAAAGCGACCTCGCCCAACCGCCAAGGACCACAACAGTGTCAGGTGTGTGCCAAAATTTTCGGGAACGCTTCCGCTTTAGCTAAACACAAATTGACGCACAGCGATGAACGGAAATACGTTTGCAACATGTGTGGGAAAGCATTTAAACGCCAGGACCATCTGAATGGTCACATGTTAACACATCGAAACAAAAAACCCTACGAATGCAAAGCGGAAGGATGCGGAAAATCGTATTGCGATGCGAGGTCCTTGCGTCGCCATACGGAGAACCACCATAGCACAATTAATACCTCGAGTACCACCATGTCCCCGGCTCAGGGTGCTGCTTCGGGGGATGCTGCATCTCCGCATGGCTCGAGTTGTATTCAATATGCGCCGCCTCCGACTGCATCAACTACTGGAAccacaaccaccaccaccaccacggGAAAGAGTCAACTTCAACAATTATTAGCTAGTGAACCAGCAAAGGGTACCACTGGTGGGAATAATGATGGGCTAACCAAGCAACAATTGGACCTTATTCATCAAATCATGGAACAAACACAACGACAATCTCAAAGCGCCCTCAAGGCGAATGCTAAACAGCAGGGCTCTAAACACACTGGGAATAAAGCACCCCAGAAAGTCCAAAGGGTATGGTCGAATTCCACTCCAGGGAATGCAAAAGGAACTACGAGCAATTCTAAAACTGGGAACGGTACTTCTGGATCTTCAGGGAATGGATTAGGTAGTGGGTCAAATACTGGGGTTAATGGTGAACCCAAACCTGTAGAGTGTAATCTATGTCATCGGAAATTCAAAAACATCCCTGCGTTAAATGGGCACATGCGATTACACGGTGGGTATTTTAAGAAGGATGCGGATAATAAGAAATGCGAAAAGAAGGATTCTTCGGGACCCCCACTTCAGACAGCCAGTGTGAGTGTCCGGGCATTGATCGAGgagaaaattatcaataagAGGATAACCAGTACGAATTCAACAAGTAATACAGTGACTACCACTTCCGGGGAGGACAATCCTCGAAGTACTACAGCTGCTCCCCCGTTATTTCCGCTTTCGGTGCATTCTAGCACCCCGGCAAGTTCTACAACCGAGGATCAGAAAGTAACTTCTTTTGTGGTACCAGCCCCACCTCAGCAGGAGAAACTAAGGCGTCATTCTGAAGCTGATGCATTCACAGTACCCCGGAAACCGAGTGTGAATAGTGCCGCTCAACAGGAAGCTGACGCAATCGCGGATATGATCCTTAAACGGGAGAAATGCACCATTAAAAGAACGGTTTCCGATCCTGGTCAGGGTCAAAGTCAAGGAGCTCAAGCACAAAGCCAGAATGAGAATCAAATCATTCAATTCCAAGCAAGTCCTGAGTCCTTTACGCTCACCTACCAAACGGACGAAGGATACTTGTCGCCTAGCCTACAAGACGAGGTCTTTACTCAGGTTCCAGATAGCATGCTGCTTCAAGGTGTAGATCCCAATCAACTGGCGTCCATCCAATTCCAAGCGGACACTATCCTTCAGGATCAAACTGATCAACTGCTTGAGGAATATACGGAAAGTAGCTTGTATCAGAGCACACAAGTCAAGCAGGAATTACAAGCCGTTTTGGATTCCCCACTTCCGGAAAGTCTCGCTGAGTTTAGTACTTATCATTCAAGTCCCACTTATCAAAGTCATCAATCCAATCAATCTCCTCTACCTCATGACTCACCGGGTTTTGCGTATCCCACTCCTCCCGCGTCCCATGAAGGACTATCACCCTGTTTCCAAAATTCCATCATGCCCATGGTATCCCCGAAACAGAATGACTTTGGATTGGATGACCCACGTCAACCGTCATCCCCTTTGACAGCCGCATTTTTCACGTCGACCATGTCCAGTGCGGAGGCCGTTGAAGAAGCCTTGGAGGAAGTGCTTCCTGGTGAAACCATAGCGGCTGATGAGTTGTACCCCTCATTGACCAACTCACCGCCTCCAACTCAGGAACAGTCCCCATTGGGACTCACGCCGGTGGCATCCCCGATGGAACCCACTCAACCGCGAACCACCTTCACTCAAATCACACCTCAATTCATGATGCCGAATTCGGAAGACCCTTTGCTGTCAAGCAGTCCCAAGGATTTCCAGACGAAAAAGTTTGAGTTCAACGGGGTGCCGTTCAAGGTCATTGGGAATGGGTTGATTGACTTGAACAATACGAATTTGACGGGTATCTTGGTCGAGAGCAATGGGGAAATCAAATTCATACAAACTGGCGGTCCAGGGTTAACCACCAAGAACATTCTAGTGGCGGGAGGGCCTTTGCTAAGTAGTTCAACGATTTCTACCACTCAAATGCACACTCCGCAAAGGGAAGAATCCAAATTGGGCAAGATGAGTAAGGGATACGTCAAGTTACTTAAGGCCAAAGAGATTAAGAGCGAGGATAATGGGCATGATGTGTTTCTGAGTCCAACTGCAGCTAGACTGGCAAGAAAGAGACCCAGAATGGAACCCCTGCAAATTCCAACCCATCATCAATCACGTCTGAGGAGATTAACGCAAGGCAATGTTCCTTATACACCTCAACCTATTCTGAATCCCAACCGGACTGGGTCTGGGTTGTTCTACTACATAAAACCCAAAGATGAGGAATACGAGTCCAACTATGACACTGATTGCACTCCACACATTAATATTGGATCCCAATATCAATGCACCCTGCCCACATTCACTCCGGGATACAATCGCGTCCCACAGGAGCACGCACCCGAGGATCTTTTATGGGATCCGGGTATCGGTCAATGCAGCAACAACGAAATCGATTTGTATTTGGATTTCGCCTGCTGTGCAGCTGTCCCTGGGGGCGGCAGAAATCACGAATTCGCAATGCATTTACTGCACATGTGCGGGGGCAATATCCACgaAGCCATGTTGAAATTGATGCAACCTACCCCCTCGCTTCCTGCGGAACACCCACTGCTCTGCTATCACTACGCAGAGAGTGACAAATGGTCCATCAACGAAATGGAACAATTCCATGCCGGATTACAGAAACACGATAAGGATTTTCACTTTATTGCTCAAGAAATCGGAAGTAAATCGTCCAAACAATGTGTAGAATTCTACTACATCTGGAAGAAGATCTGCGGGGATGAGTATCGTAAATTTAAGCATTTCCGGGATATCAAGACCACCGTCAAATCAGAATTTGACGACAAGGACGATCGGGATGTTTCAGAATTAGGTCCTCAAGTGATTCAGCAAGAAGTTCGTGGGTTTTCTTGCGAATATCCTGATTGCTCAGCTAGCTTTAACTCGAGAGCAGCCCTTAATGGTCATGTCCGTATCCATGGTGGCAACACGCGGCAATCGCCCACACCCCATACGCAAAATGGGTGCTCAAGTTTGGAGAATGCCCTAGGAAACGGGAACTCCAACAGCAGCCTGCACCAATTACTGGGTGGGAAACGCACCCAGCAGTCGCAGCACAAACACCTTCCCTGCCACGTGGACCTCCACAACGGCAGCCACCCTCCAGCAGGGGACGACTACCCTTGTAAGATATGCGGGAAGGTATTCACAAAAATCAAAAGTCGCAGCGCACACATGAAATCGCATTCGGAGCCTACGAAAAAGAATGCGatacaagcagcagcagcagcgacaCTCAACTCCGTGCCAACTTCGTACAACTCGTAG
Protein Sequence
MTIFENEGVHELAGVRLPLQPYAGGHAVFMYSTAADGNVTLQLKEPDDLDRSSLAAMLARLQDDATFSISYQDTDILSDGSIDVLLGTGSNQTTDGSEPVTASFDLFDSSSGPDLTLSPQTFTNSAEAFINDNSNSLGVPADNDPVSSTEDTKKLQAEVVKLAVKRARPKATSPNRQGPQQCQVCAKIFGNASALAKHKLTHSDERKYVCNMCGKAFKRQDHLNGHMLTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHSTINTSSTTMSPAQGAASGDAASPHGSSCIQYAPPPTASTTGTTTTTTTTGKSQLQQLLASEPAKGTTGGNNDGLTKQQLDLIHQIMEQTQRQSQSALKANAKQQGSKHTGNKAPQKVQRVWSNSTPGNAKGTTSNSKTGNGTSGSSGNGLGSGSNTGVNGEPKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDADNKKCEKKDSSGPPLQTASVSVRALIEEKIINKRITSTNSTSNTVTTTSGEDNPRSTTAAPPLFPLSVHSSTPASSTTEDQKVTSFVVPAPPQQEKLRRHSEADAFTVPRKPSVNSAAQQEADAIADMILKREKCTIKRTVSDPGQGQSQGAQAQSQNENQIIQFQASPESFTLTYQTDEGYLSPSLQDEVFTQVPDSMLLQGVDPNQLASIQFQADTILQDQTDQLLEEYTESSLYQSTQVKQELQAVLDSPLPESLAEFSTYHSSPTYQSHQSNQSPLPHDSPGFAYPTPPASHEGLSPCFQNSIMPMVSPKQNDFGLDDPRQPSSPLTAAFFTSTMSSAEAVEEALEEVLPGETIAADELYPSLTNSPPPTQEQSPLGLTPVASPMEPTQPRTTFTQITPQFMMPNSEDPLLSSSPKDFQTKKFEFNGVPFKVIGNGLIDLNNTNLTGILVESNGEIKFIQTGGPGLTTKNILVAGGPLLSSSTISTTQMHTPQREESKLGKMSKGYVKLLKAKEIKSEDNGHDVFLSPTAARLARKRPRMEPLQIPTHHQSRLRRLTQGNVPYTPQPILNPNRTGSGLFYYIKPKDEEYESNYDTDCTPHINIGSQYQCTLPTFTPGYNRVPQEHAPEDLLWDPGIGQCSNNEIDLYLDFACCAAVPGGGRNHEFAMHLLHMCGGNIHEAMLKLMQPTPSLPAEHPLLCYHYAESDKWSINEMEQFHAGLQKHDKDFHFIAQEIGSKSSKQCVEFYYIWKKICGDEYRKFKHFRDIKTTVKSEFDDKDDRDVSELGPQVIQQEVRGFSCEYPDCSASFNSRAALNGHVRIHGGNTRQSPTPHTQNGCSSLENALGNGNSNSSLHQLLGGKRTQQSQHKHLPCHVDLHNGSHPPAGDDYPCKICGKVFTKIKSRSAHMKSHSEPTKKNAIQAAAAATLNSVPTSYNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2