Basic Information

Gene Symbol
Polr2D
Assembly
GCA_963978815.1
Location
OZ022219.1:445717-447605[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-10 1e-07 31.8 0.2 3 42 92 130 90 133 0.96

Sequence Information

Coding Sequence
atgaataccAATACTGATTTAACGGAAGAAGAAGCTGCAGATTTACAATTTCCAAAGGAACAAGAACATACAACTTCTCGCcagcatttatttttaattgataataaatgtGGTAACTGTGAAAATGAGTTAGTAGATAGGTACATAACATGTGTTGATTGCAATGAAAACATCTGTGTGTATTGTTTCTCCAATGGCGTAGAATTTCAGGATCATAGAAATGATCACAGCTATAAAGTTATTAATGcagagtttaatttatttgagcAGTCAGACTGGACAGCCAAAGAAGAACTTGCACTGTTAAATGGCTTGCTTAATCATGGCAACTGGCATGTAATTGCAAAACAGATGCAAAACCGAACAGTAGATGAACTGAAAAAGCATTACGAGGACTTTTATTTGGAACAAAGAGCTTCAAAAGAAATGCCTATCTTTAAGAAACCCAAGGAGTATTCTCCTGTGCAACCAATAATTTGTTATCGAACAAAACTGACTGGCCTTACAAATCCAATACGAGGCAATGATAACATGTGTGCTGGATATAGTGCAGCACGATCTGACTTTGAGTATgattatgataaaaatgctGAAGATTTAGTCACAAAGTTAGAAACAGTAGATCCCTTGGATGCTCATTATCAGCTACAAACTGACTTGCAAGTTGCAATATTAAACATATACCGTCGGCGAATTGGCGAAAGGGAGCGGCGAAAACAGATTCTAAGAGAGCATGGACTTATTATGCCTCAAAAGACAAAGTCTTGGCTTCAGAGATATCACGCCACGATAACAGCTCCAGTTTATGAACGATTAGTTCGTTTCATGCAATTCTACACTGGCCAAGGCTTCGTTTATTTACTAGAAGGCCTTCATAGAGCTGGCGAGCTTAGGATGCAAATATCCAgattaattGAGCAGCGAAAGCGTGGCATTAAGACACTTGAAGAGGCGCGACTTTATACAAGACTGAAACACCATCGTGAGGAATGTATGACAGAGCTTAAACGATTTCAACAAGCGTCCGAGTTatcatttaaatgcaaacagGCATTATCAGGCAATGGAACAAAGCGAAGAGTTACCCCACTTGAAATTGCGGGACTACCCAGTTATGATAAGCTCGGTACTCCAGAACGTGATTTGTGTCGAAGTATTCGACTCTCACCGACACTGTATTTAGAGCTCAAAACCATTCTGGTCCAGGAGAATAATAAACTAGaATTTGAGAATGCTGAAACTCTTCTAATCTCCGAGGTGCATATGTTGTTGGAGCATCGTAAGAAACAAAATGAATCAGTCGAAGACGAACAAGAATTTTCAGAAGTATTTATGAAGACTTTAACGTACACGGATCGATGCCGCAAGTTTAAAAACAAGGAGACAATTTGTGCCATTcgaaaTCTCTTGGTTCAAAAGAAATTGCACAAATTTGAATTGGCTGCAATTGCTAACTTATGTCCAGTGACCACCGATGAAGCTAAATCGCTAATTCCATCGTTAGAAGGCCGCTTTGAAGAAGAGGAACTTCAATCCGTTTTGGATGATATACAAACAAAGCGCAGCATTCAGTACTAA
Protein Sequence
MNTNTDLTEEEAADLQFPKEQEHTTSRQHLFLIDNKCGNCENELVDRYITCVDCNENICVYCFSNGVEFQDHRNDHSYKVINAEFNLFEQSDWTAKEELALLNGLLNHGNWHVIAKQMQNRTVDELKKHYEDFYLEQRASKEMPIFKKPKEYSPVQPIICYRTKLTGLTNPIRGNDNMCAGYSAARSDFEYDYDKNAEDLVTKLETVDPLDAHYQLQTDLQVAILNIYRRRIGERERRKQILREHGLIMPQKTKSWLQRYHATITAPVYERLVRFMQFYTGQGFVYLLEGLHRAGELRMQISRLIEQRKRGIKTLEEARLYTRLKHHREECMTELKRFQQASELSFKCKQALSGNGTKRRVTPLEIAGLPSYDKLGTPERDLCRSIRLSPTLYLELKTILVQENNKLEFENAETLLISEVHMLLEHRKKQNESVEDEQEFSEVFMKTLTYTDRCRKFKNKETICAIRNLLVQKKLHKFELAAIANLCPVTTDEAKSLIPSLEGRFEEEELQSVLDDIQTKRSIQY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00083841;
90% Identity
-
80% Identity
-