Basic Information

Gene Symbol
jarid2b
Assembly
GCA_963978815.1
Location
OZ022216.1:5033861-5039608[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.74 1.3e+03 -0.3 0.0 14 85 523 593 513 595 0.56
2 2 1.1e-20 1.9e-17 63.3 0.0 8 89 1219 1298 1214 1298 0.93

Sequence Information

Coding Sequence
ATGGTGTTTAATCGCAAACGGAAAGACAATAGATCGTCTAGGATTATCTTGGATGATAGCCCAAAAAGGGCAAAAGTGCAAGCACAAAGAAAATTTGCACAAGGTTCCAATGTAAACAGTCCAGTGTTAACTCCAGTCAGTGAACTGGAAGTTCCAGAGAAAATTATGCCTGAAGCAATTGAATTGCAGCCAATGAAGAGGCCCAATACTGAAGAttttttgacatttttatgCTTTCGGGGAACCCCTGCACTGCcaccaaatttaaatttcttcaaCAATGTGTCAATGAGTGAGAGTCAGCCTTTAGAACAAGAGTCACAAAACTGTAGTAAGAATGGTGTTATCCTCCCTGCTAATATATCAAAGCTGCAAGGTGGCAAACCTTTTATTGCATTTGGAGTAAGAAAACGAGCAGATCCAATTGTTGTCTCTAGGCATATGGATAAGAAAAGGAGACATGCACTTGCATTACAAGCATTAAGAAGAAAATATCAAGAACAGAAAATGGCTAAAATAAGAGCAATTACCATAagcaatattaatgaaaaagttcataataataaaactatgTTAAGAGCTTCAAGAACTCTTGCAAGAACAGATCCGCCAACCAAAAAACCAACCacacaaaaagcaaaaattgCTGTTGTAGCTGCTAAACATGTAAAAATTGCAACTAGAAGGACAagtatacaaattaaacaaagagCTAACACCAAGTTGAAAATGTGCCTGAGAAATTTTAAGAATAAGGTTGTTAAACATGATACTTTACaagataaacaaaatgttataaaacaGGCAAAATTACTGAAGAGCAAACAAGAAAATGATGGTAAATCTGTTAAACAGAAGGAACCTTCAACaagtgaagaagaaaaatcatcaattcctaatttaattgcaacacGACGAAACAAGCAATTGTTATTACGACAGCAAAACTTAAATACACCAACGTTGCCATGCCTTAGGTCACAATTAAGACggaaaattttacaaaaaaccGAACTTACCGTTCCTAAACGAAAAATTCTCACGCGTAAGGTTCAATtaaaaggtaaaacaatttgtaaatCTATAGAtattaaaaaagaaacaaaaatatcACCAAAAACATCAAAGGATGAAGTTATGTTATCTTCAAAGAAAAAGATTATTGCTTCCTCAAAACCAGAACCAAAATCAAAAGTTGATCAAGGTGAAAATAAAGGCAATAAGTCTatacaaaaaataaaagaagaacTTGAAGCTAAAACAAAGAGTGTTgctgcaaaaaataaaaaatctaaTAGTGAGGACAAAAGTGATAACGCTCATTCAACACGCAAAAacaaagttaatttaaaaagttccgaaaataaaaattcaattgctgATAAATCTGAAACTAGTGTTAAATCAATAACTAAATCAGAATCGAACACAAGTCTGGACGTTGCAAATTCTTCAAATCATgatgaaaaagaaaagaagagGGTTTCTGGCAGTGACTCAAGCATGGGTTTGATTAAAACGGAATCCCCAGCAACATTATTGAAACGGAGTGAagataaagtaaataaaaagagGAATATTTCACCGGTGGGTAAGGAGAAATCGGTTGATACCACAGTAATAAAAAAAGAAGTGATCAATGGCGCTGAAGGAAAGGCTGAAAAGAAGACTGATAAAAAGGATGCAGCCTCGGAAGTTGAGAAAGCTAAGTCTCTTCAGGTGTCGCAAAGACCAACAAGGAAAACTAAAGTTGCTGCTGCAATATATATGGAAATTTTAGGTCGCAAATTAGTGAATGATGAAGATGTAGAAGACCTTTCCAATGATAGTTTTCCTGAGTTGCCAAATATAAAAAGAATAGAGCAACGCGAAAACGAATTAAAAGcagctaaaataaaatatgcaaagtcAGCCGCGAAAAAGAGAAATGCAAAAAGCAATGGAGGAAATGCCGAAATTACCAAGCAAACTGAATCCaaagagaaaacaaaaaactCTACAAGTCAAAAAGGAAATTCAAGTAAGAAAGGCCAATCTGACGCCGGTGATACAAGTGTAAAAAAGCGACCGGCGAAACGGAATACGGATGTCCGAAATGCGATTCAGATTAAAAGCAAAGTGTCAAGTAATGGAGCAGTTAAAGAGTATTTTAGTGATTCGGATGAAGAACCTCTTTCTAGATTAACTCAAAAGGctaatattaatcataaagttAAAATTGATACGGATTCTACTCCGTTGGGCAGTCTGCAAAAGGAATGCACAGTTCAAACGCAAAACTGCGAGTCAATGTTTTCATCGTCGGACGAAGAAAAATTATGTCGATTAACAACGAAGAAAGTCATCCCTAAAACAGAACCAGTACAGGAAACTTTATCTACAAAAGACATTGGCAGAAGATTTGGAAAAGAAAAGGTAAACATGTCcaatgaacaaattgaaaaatggtTAAATGATAGTGCAATGGCGGgcataacattaattaaagcaGAGAATGATAAAATGCTTAAATTTGGAGAAAGGATTCCAACGGAGACATCGTTGGATACCGCGATAGATGCTGTTAATATTATGGATCCTGGACCAGTGAAACTTAAGGAGAAAGCGACTATCGCGACGATAATTAATACAACTCCAGAAAAGCACTTGACAAGTCCACAAAAACCGTCTTTAAATGAAAAGAGAACCATATTTCGAAAAGCTGATAAGTTGTCAAAGAATGCAAACGCATTCTCAGTGTGTAATGAAAGTAgtgtttatgcatttgaagcAGATACTGAAGATACTGTAAGTACTCCATTTCGAAGACCATCAAGACGTCCAAGTAGCACCAGCAGATCAGAGGATGATTTTTCCAGAATGGAGCTTGACAATAAGTTAAAATTGCGCTGGCCAACAAACGCTGCAGATAAACCTAAACAAGAGGTATCTTTAATGCTCACTGACGAATCAAATCATAGTGGATCTATTACGCTTCACGTGAATCTTGCACCAATGGATAATGATGCACAGGGACAAGGAAATAGTGGGCAAATGTTTTACATTCCATTTCAGCCTGGAGAAAAAGCATCTAATATTCAAGGAGTCGCCATTAAAATGGGAACGGATACTACTAGTAATTCTAAACTCATTATGAGCGCGAAACTCGTCTCGCAAAGTACTTCCTCCCCTTTGACGGAGAAAGTAATATCGAATCCGATGTTCCCACCTTCTAGTAGCTCAACACGATTTAAGAAACAGGATCAGAAAAGTAAAAGTAGCTGCAATATGAGCGAAGTTTCAGATGAATTTAAGTACAAAATTCCAAGTTCTCCAAGTGCAAGTTCCTCTTCCAGCGCAAAGTTGGTGAATAAGAAGAGGCATAATGAGGATTTATATAAGCCAGTTAATGCGACGGAGTTTCCAAACTTATTGAACCCTGCGAGTATAGTAGAAGCCCCAATTTTCCATCCAACAGAGAAGGAATTTGTGGATCCCTTGGAATACATTGAAAAAATTCGGGAAAAAGCGGAACGTTTTGGAATTTGCCGTGTCGTACCACCAAGTAACTTTAAACCGGAATGTAAAGTTCTTGATGAGATGCGCTTCACTGCGTACAatcaatatattcataaaatgatGCACCGTTGGGGTCCCAACTTCCGTGAATTGGTTGCTATCCGAAAATATTTAGCAACGCAAAATATTAATCTTAAGCAGCCGCCTTGGATTGGAGGAATTGAAGTTGATTTGCCAAAGCTCTATGAAACGGTTCAAATACTAGGTGGATTAAAGGATGTTATAGAGAAAAAGCGATGGCCGCGTGTGGCTgaattaatgaacattcctAAATCTGCCCAAGACCGAGTTAGTAAACTAGATGATatatattgcaaatatattttgccATATGATACTTTGTCTCAagATGAACGCGAGAGATTATTTGAAGCGGTTGATGCCGAATGGGCTGCGAGAGAAGCGAAAATGCTCGAAAAAGCTAATAATTGTAGTAACCCTCTAAAGGAAgaggatgatgaagaagatgacgatgacgaccaAGAGGATGACGATGAGTGTGATGAAACGGACATTGAATGTATCGTAAAAGGAAGAAGTATGGCTTTAAGTGCATTTTACAGGATTGCTCGTAATACCCGAGCAATGTGGTTTAAGGAAACGGAGCCAACGCCACAAGAAGTCGAGGATGAATTTTGGAAACATGTTGCAGAAAGACAGCACCATATTTGTGTCCATTCTGGTTCAATTGACTCTGGTAATTTCGGATATGGTTTTGCTGTATCTAAAAACTCGCCATTTGCGCGGCATGCTTGGAATTTGAAAGTGTTAACAAACAATAGCAGATCAATATTGCGGTCAATGGGACCTGTAATGGGCTTGACTGTACCTACACTGCACGTAGGTATGTTATATGCTGGATGCTGTTGGTATCGTGATCCACATAGTCTTCCCTGGATTGAGTACTTACATACCGGCGCGAATAAAATTTGGTATGGCATACCAGATTCAATgagcaataaatttcatgaaGTAATGGTAAAATTAGTTCCGCATTACTGTCTCAATAAAAGTCTATGGCTACCAACTGATACCGTTATGGTGCCTCCAAAAACTTTGGTTGATAATGGAGTATCGCTGACAAAGACTGTGCAAGAGCCAGGCCAGTTTGTAGTCATTTTTCCGAAAGCTTTTACTTCAAATATATGCGCCGGATACGTTGTGTCTGAAAGTGTATTTTGGGCACCACCAGATTGGTTAAAGTGTGCCGATCAAGTTTTTCTTCAACTTCGAAATAATTGTGAACCTTCGATGTTTTCTTATGAACGGTTATTATTAAGTCTGGCGGAAGATTCACGATCAGATATAAACGTGTTAAGGAAAATAATCTCGCCATTAGAGCGTATGATTGAGAGGGAGCAAAAGGAGAGATTGGTTATTAAAGGACTAGGTATCAAAAAGACCTCCAGGTTGCCATTGTTAGATGTCCGCCGGAAAAAGAAAATGCAGGACACGGATACTGAGTATATATGTGATGATTGTAGATGGAATTTATATTGTTCTATGATATTCGAAACGACGGacaatgcattttattgcttaGAGCAtgccattttaaatattaaggaCAAGcgattaaaagttgaaaattgcaaatttatgtaTACCTATGATGACCATGAACTAAATGGATTTATCGAAAAGATTTATCTTGCAATTGAAACAAAGCTAATAAAGAAAAACTGGAAATAA
Protein Sequence
MVFNRKRKDNRSSRIILDDSPKRAKVQAQRKFAQGSNVNSPVLTPVSELEVPEKIMPEAIELQPMKRPNTEDFLTFLCFRGTPALPPNLNFFNNVSMSESQPLEQESQNCSKNGVILPANISKLQGGKPFIAFGVRKRADPIVVSRHMDKKRRHALALQALRRKYQEQKMAKIRAITISNINEKVHNNKTMLRASRTLARTDPPTKKPTTQKAKIAVVAAKHVKIATRRTSIQIKQRANTKLKMCLRNFKNKVVKHDTLQDKQNVIKQAKLLKSKQENDGKSVKQKEPSTSEEEKSSIPNLIATRRNKQLLLRQQNLNTPTLPCLRSQLRRKILQKTELTVPKRKILTRKVQLKGKTICKSIDIKKETKISPKTSKDEVMLSSKKKIIASSKPEPKSKVDQGENKGNKSIQKIKEELEAKTKSVAAKNKKSNSEDKSDNAHSTRKNKVNLKSSENKNSIADKSETSVKSITKSESNTSLDVANSSNHDEKEKKRVSGSDSSMGLIKTESPATLLKRSEDKVNKKRNISPVGKEKSVDTTVIKKEVINGAEGKAEKKTDKKDAASEVEKAKSLQVSQRPTRKTKVAAAIYMEILGRKLVNDEDVEDLSNDSFPELPNIKRIEQRENELKAAKIKYAKSAAKKRNAKSNGGNAEITKQTESKEKTKNSTSQKGNSSKKGQSDAGDTSVKKRPAKRNTDVRNAIQIKSKVSSNGAVKEYFSDSDEEPLSRLTQKANINHKVKIDTDSTPLGSLQKECTVQTQNCESMFSSSDEEKLCRLTTKKVIPKTEPVQETLSTKDIGRRFGKEKVNMSNEQIEKWLNDSAMAGITLIKAENDKMLKFGERIPTETSLDTAIDAVNIMDPGPVKLKEKATIATIINTTPEKHLTSPQKPSLNEKRTIFRKADKLSKNANAFSVCNESSVYAFEADTEDTVSTPFRRPSRRPSSTSRSEDDFSRMELDNKLKLRWPTNAADKPKQEVSLMLTDESNHSGSITLHVNLAPMDNDAQGQGNSGQMFYIPFQPGEKASNIQGVAIKMGTDTTSNSKLIMSAKLVSQSTSSPLTEKVISNPMFPPSSSSTRFKKQDQKSKSSCNMSEVSDEFKYKIPSSPSASSSSSAKLVNKKRHNEDLYKPVNATEFPNLLNPASIVEAPIFHPTEKEFVDPLEYIEKIREKAERFGICRVVPPSNFKPECKVLDEMRFTAYNQYIHKMMHRWGPNFRELVAIRKYLATQNINLKQPPWIGGIEVDLPKLYETVQILGGLKDVIEKKRWPRVAELMNIPKSAQDRVSKLDDIYCKYILPYDTLSQDERERLFEAVDAEWAAREAKMLEKANNCSNPLKEEDDEEDDDDDQEDDDECDETDIECIVKGRSMALSAFYRIARNTRAMWFKETEPTPQEVEDEFWKHVAERQHHICVHSGSIDSGNFGYGFAVSKNSPFARHAWNLKVLTNNSRSILRSMGPVMGLTVPTLHVGMLYAGCCWYRDPHSLPWIEYLHTGANKIWYGIPDSMSNKFHEVMVKLVPHYCLNKSLWLPTDTVMVPPKTLVDNGVSLTKTVQEPGQFVVIFPKAFTSNICAGYVVSESVFWAPPDWLKCADQVFLQLRNNCEPSMFSYERLLLSLAEDSRSDINVLRKIISPLERMIEREQKERLVIKGLGIKKTSRLPLLDVRRKKKMQDTDTEYICDDCRWNLYCSMIFETTDNAFYCLEHAILNIKDKRLKVENCKFMYTYDDHELNGFIEKIYLAIETKLIKKNWK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00083690;
90% Identity
-
80% Identity
-