Basic Information

Gene Symbol
Kdm5
Assembly
GCA_963978815.1
Location
OZ022222.1:1246149-1251348[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.2e-24 1.1e-20 73.6 0.1 2 89 114 197 113 197 0.94
2 2 2.9 5.2e+03 -2.2 0.0 33 68 1264 1299 1258 1316 0.67

Sequence Information

Coding Sequence
ATGAACGCGAATTTAAGAATAATGATGAGCAAGGAAAGTAGTGGAAGTATGGGTGCATCGTTTGTACCATCCAGTGCTGATGGCGGCGCAGCCACAGGTGTAACAAGCGAGTTTGACTTCGTCATTCCGCCGGAAGCTCCAGTTTTTACGCCCTCCGAAGCGGAGTTCGCTGAGCCGCTGATATACATAGATAAAATTCGGCCGGTTGCTGAAAAGTATGGGATTTGTAAGATTAAACCACCAGCGAATTGGCAGCCACCATTTGCTGTCAATGTTGATAAGCTTAAGTTCACGCCGCGCATTCAACGTCTCAATGAATTGGAGGCAAAGACGCGCATCAAACTCAACTTCCTTGATCAGATTGCCAAGTTCTGGGAGCTGCAAGGCTCCTCACTCAAGATTCCTATGGTTGAGAAGCGCGCATTGGATTTGTACACACTTCACCGCCTGGTTGAGAATGAAGGCGGCTTCAATGTGGCGAGCAAGGAGCGGAAGTGGGCAAAAATTGCTGTTCATATGGGCTATCCACATGGTAAAGGGACGGGTACCATTCTGAAAACCCACTACGAGCGCTTGCTATATCCATATGAGTTATTTACCAATGAGAAGAAGACTGCAGATTATGATACAAAGGACGAAGATTACAAACCACCCATAGCTAGTGCTGTTACCACGAATGGTAAGAAAAATGGACAAATGCGACGATCCAAGGAGAAGACAATGAATAATTCGCTGGAGATCAAGCAAGAAGACAATGCCGAAGACCGCATGTTAGAGAAGCGTAACAATAATAAGCGAGATAACAAGGAGAATAATGATTCGAAGATGAATTGTAAGGGAGTAAAGTCGCCGGTTAAAGATGAGCCCGAGGGTGATGGCAGCAAGGAATTGAAGCGGTTGCAATTCTACGGCGCTGGACCAAAAATGGCAGGTTGTGTTAATAAGCGGAAGCGGGATGATAAAACACGTGGGAAAACGCTTGATTGTCAAGCCGACTACGATCCGCTCGCTAAATATATTTGTCATAATTGCCGACGTGGAGATGCCGAAGAGCAAATGCTGCTTTGCGATGGATGCGATGACAGTTACCATACATTTTGTCTGAATCCGCCACTAGCTGAAATTCCAAAGGGTGATTGGTGTTGTCCACGTTGTGTTGCCGCTGAAGTCTCAAAACCAACGGAGGCATTTGGTTTTGAACAAGCGCAAAGGGAATACAACCTACAACAATTTGGAGAGATGGCTGACACATTTAAATCCGAGTATTTTAACATGCCAGTACACATGGTTCCTACTCCCATGGTGGAGAAGGAATTCTGGCGTATCGTTTCGTCCATAGATGAGGATGTGACTGTCGAATATGGGGCTGATTTACATACCATGGATCATGGATCGGGCTTCCCAACAAAGGATTCCATCAATCTTCAGCTTGGAGATCAAGAATACGCATCTTCTGGTTGGAATTTGAACAATTTACCTGTTTTAGAAGGATCCGTTTTGGGTTATATAAATGCCGATATTTCCGGTATGAAGGTGCCTTGGATGTACGTTGGAATGTGTTTTGCAACGTTTTGTTGGCACAATGAGGACCATTGGAGTTACTCCATCAATTATCTGCATTGGGGAGAACCAAAGACTTGGTACGGCGTGTCTGGAATGCAGGCGGAGCTTTTTGAAAAGACGATGAAGAGTGCTGCTCCGGAATTGTTTCACAGCCAGCCAGATTTGTTGCATCAGCTCGTTACCATTATGAATccaaatattttgatgaatgCAGGCGTGAAAGTTTTTCGCACTGATCAAAACGCTGGCGAATTTGTCATTACATTTCCTAGAGCGTATCATGCTGGCTTCAATCAGGGCTATAATTTTGCGGAGGCGGTCAACTTTGCTCCCGCCGATTGGATTGCTATGGGTCGTGAATGCGTCTTGCATTATTCGCAGTTACGTCGCTTCTGCGTGTTTTCGCATGACGAATTAGTTTGCAAGATGGCAACGAATGCCGACAAATTAGACATCACTGTGGCGGCTGCCACCTACACAGATATGCTACGCATGGTCGAGACGGAGAAGAAGCTTCGCAAGAGCTTACTTGACTGGGGCGTAACTAATGCTGAACGTGAAGCTTTCGAACTTCTTCCGGACGATGAACGTCAGTGTGAAATCTGCAAAACAACATGTTTCATGTCAGCTCTGACGTGTGAATGCACTACCGAGATGCTTGTTTGCTTACGACATTACACTTCCTTGTGTAAATGTCCACCAAATCGACACACCTTACGATATAGGTATACACTTGATGAACTGCTGCCGTTGTTACGAAGTCTAAAACAAAAGGCGGAGTCGTTTGATCGATGGGCTGATAGTGttaagaaggtgctggatcgtaaAAATCGTAAAGATGTTACGCTGAGTGAATTGCGATCACTTGCGCAGGAAGCAGAAGGTAAAAGTTTTCCAAAGTCTGAATTTGTTCAGACACTCGCCAATGCGATCGAAGATGCCGAGAAGTGTGCCAGTGTGATACGGCAATTGGATTTGAAGAAGGTGCGCACTCGACACTCACACGACCATAGGAATAAACTGACACTCGAAGAGTTGCGATTGTTCTACGAAGAAATTGACAGCTTGGCGTGTCTTCTTGAGGAGGAGAAGATTATCAAGGACTTGCTGGATCGTACCAATCAGTTTGAGAAGGAAGCTTCCCGTTTGCTCGCCATTAAACTATCTGAATGTCAGCTGAAGGAAGTTGAGGATGCAATAACCATTAGCAGTGAGCTGTGCATCGAGTTGCCGTCATTGAAATCATTAATGGATCGTCATAGTCAATTAAAATGGGTGAAGGAAGTATACGATGTAAGAAAGAAGCCGGGAGATGTGGCGGATATTGACACACTAAAAGATTTATTGAGAAAAGGCGTTGTTTTGCCGAGTGATTCTTTGATTGAGggcataattaatgatttgcaACGAGTAATTACGTTGGCTGAAGATTGGGAGTCAAAAGCGCAAGCACTATTTAAGAAGACTGGTCCGGATGTGCTTGGTGAAGCGGAAGTTCTTATCAACGCGGCATCCAATATTGATGTATATCTACCAACAGAAAATTTATTGGTCGATAGCGTGAACAGTGTTAACGAATGGTATCGGAGCTTGCAAAAGATGAACTCTCTTGAGTATTACCCGTATCTAACGGCACTGGAGGAACTGATTAAGAAGAGTAAGAACTTTTCCTTTCAATTGGAAGAAGTAGACCGCTTGAAAGGATACGTGTGTGGTGCGAACGCTTGGAAGGAGAAGACTTCCAAGATTTTCTTGCGGAAGAATACGAATGGCAGCCTTATGGATTCCTTATCACCGCGCGCTCCATCTGCGTACGCACGTCCAACACCAGGCAGGAAGAAACCGGTAGAGGATTCAGTGAAACTCCTGGATACTATGGATCCCTGCACAGTGGTGCAGATGTTTAAGGAAGCCGAAGAGCGCGAGTTGCTTCTGATGGACGAGATGCGTACCACGAATCGAGCGAAAGTGATCAGCAAGGAGTCGACGGATACGTTTTGCATTTGCGGAAAACCCGCGTCCGGTGTGATGATGCGCTGCAATTTGTGTAATGATTGGTTCCACTCAACGTGCACGCCATTACCGCGCTTAAGCGTGCGACGTTTGCGCAAGAGTCTAAAGCACTCTGCAATCCATCTGGGATTTAAAGACTGTAAGTTCCTTTGTACATTATGCAATCGAACTCGACGACCACGACTGGACGTTATTTTGAGTCTCTTGATGGCTCTTCAAAAATTATCATCACGAGTACCTGAAGGTGAAGCACTGCAATGTCTTACAGAGCGTGCAATGCACTGGCAGGATCGAGCTAGGCAGCTATTATTACGTTCAGATGTGGCCGCCGCTTTGACCAAGATTCAATCATTGGTGCAGAAGTATGCGGAGACGAATACAGCTAAGAAAATCAACAGCCTTAAGAAATCCAAAGACGATGCGCCGAATACCAGCGAGGATGAATCGCAATCGGCGCACAGCAGCATTTCATCAGATGAAGAGGACTGCAAGGACGAACATGCGTACTCGATGAACTGCAAGCCCGCATTCGATGCGGATGTCAGCATTCAATTATCGCCCAACTCGAGGAACCTTCTGCACGAAATGCTGACGGAGGGTGATTTGTTGGAAGTCAGTCTGGAGGAAAGCGCGCTTCTGTTTCAGATATCTCTAATGTCTCGGGATTTTGAAAAGGAGCCCTATATCGTAGATTTGGATGTTTCGTCGAAGATAACCACGCCTCGTAAAGCACGCAAGCGGCGACGCGGTGATGTCGAAGAGAAAGTGAAGAAGGAAATTGGCAAAAAATCGAAGGGACGAAAGAGTACTGCGGGGCCGAATAGCAATACTAACAATAGTGGCGGTAAACAAGTGACCCGCAAGCGAAAAGGACGCGCTCGCAATTCGCAATCGAGCgatgatgaggatgaggaCGAGAACGCGGTATGCGCGACTGAAACGTGTTTGCAACCGACCGGCGAAGAGGTTGATTGGGTGCAGTGTGATGGTGGTTGCGAAAAATGGTTTCACATGGCTTGCGTTGGGCTCTCCGTGAAGGACATCAATGAGGACGAAGACTATTATTGCTCTGCGTGCTCGCCGCCCGAAACAGTTAAAGAACGGTTAAAACTCGTCAACTCCAATGATTTACTTATTGAGTACTAA
Protein Sequence
MNANLRIMMSKESSGSMGASFVPSSADGGAATGVTSEFDFVIPPEAPVFTPSEAEFAEPLIYIDKIRPVAEKYGICKIKPPANWQPPFAVNVDKLKFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPMVEKRALDLYTLHRLVENEGGFNVASKERKWAKIAVHMGYPHGKGTGTILKTHYERLLYPYELFTNEKKTADYDTKDEDYKPPIASAVTTNGKKNGQMRRSKEKTMNNSLEIKQEDNAEDRMLEKRNNNKRDNKENNDSKMNCKGVKSPVKDEPEGDGSKELKRLQFYGAGPKMAGCVNKRKRDDKTRGKTLDCQADYDPLAKYICHNCRRGDAEEQMLLCDGCDDSYHTFCLNPPLAEIPKGDWCCPRCVAAEVSKPTEAFGFEQAQREYNLQQFGEMADTFKSEYFNMPVHMVPTPMVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKDSINLQLGDQEYASSGWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVSGMQAELFEKTMKSAAPELFHSQPDLLHQLVTIMNPNILMNAGVKVFRTDQNAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWIAMGRECVLHYSQLRRFCVFSHDELVCKMATNADKLDITVAAATYTDMLRMVETEKKLRKSLLDWGVTNAEREAFELLPDDERQCEICKTTCFMSALTCECTTEMLVCLRHYTSLCKCPPNRHTLRYRYTLDELLPLLRSLKQKAESFDRWADSVKKVLDRKNRKDVTLSELRSLAQEAEGKSFPKSEFVQTLANAIEDAEKCASVIRQLDLKKVRTRHSHDHRNKLTLEELRLFYEEIDSLACLLEEEKIIKDLLDRTNQFEKEASRLLAIKLSECQLKEVEDAITISSELCIELPSLKSLMDRHSQLKWVKEVYDVRKKPGDVADIDTLKDLLRKGVVLPSDSLIEGIINDLQRVITLAEDWESKAQALFKKTGPDVLGEAEVLINAASNIDVYLPTENLLVDSVNSVNEWYRSLQKMNSLEYYPYLTALEELIKKSKNFSFQLEEVDRLKGYVCGANAWKEKTSKIFLRKNTNGSLMDSLSPRAPSAYARPTPGRKKPVEDSVKLLDTMDPCTVVQMFKEAEERELLLMDEMRTTNRAKVISKESTDTFCICGKPASGVMMRCNLCNDWFHSTCTPLPRLSVRRLRKSLKHSAIHLGFKDCKFLCTLCNRTRRPRLDVILSLLMALQKLSSRVPEGEALQCLTERAMHWQDRARQLLLRSDVAAALTKIQSLVQKYAETNTAKKINSLKKSKDDAPNTSEDESQSAHSSISSDEEDCKDEHAYSMNCKPAFDADVSIQLSPNSRNLLHEMLTEGDLLEVSLEESALLFQISLMSRDFEKEPYIVDLDVSSKITTPRKARKRRRGDVEEKVKKEIGKKSKGRKSTAGPNSNTNNSGGKQVTRKRKGRARNSQSSDDEDEDENAVCATETCLQPTGEEVDWVQCDGGCEKWFHMACVGLSVKDINEDEDYYCSACSPPETVKERLKLVNSNDLLIEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00083687;
90% Identity
iTF_00083687;
80% Identity
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