Abil002961.1
Basic Information
- Insect
- Aleochara bilineata
- Gene Symbol
- stc
- Assembly
- GCA_003054995.1
- Location
- NBZA01001102.1:30376-33471[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 1.5 1.3e+04 -3.7 1.6 15 19 335 339 334 339 0.81 2 7 0.065 5.6e+02 0.6 0.4 4 10 368 374 367 374 0.96 3 7 2.7e-06 0.023 14.6 14.1 3 19 382 398 381 398 0.93 4 7 8.1e-06 0.069 13.1 11.0 1 19 434 452 428 452 0.86 5 7 8.7e-09 7.5e-05 22.6 15.0 1 18 492 509 492 510 0.98 6 7 3.8e-09 3.2e-05 23.8 12.8 1 19 562 581 562 581 0.97 7 7 0.0087 75 3.4 16.9 3 19 592 610 591 610 0.93
Sequence Information
- Coding Sequence
- ATGTCTAACTGGAACCAATCGTGGCAACGTGATGATTATCGTCAACGTGCACCTCAGACTCCAGCGAATTTTCTTACGCTCGAGCAGATTGAGCTTCAGCAGCAGCTTAATAGCATTGTTCATAGAGATAAACACTCTCAGGGACCAGGAAGTTCAAGTCAATTCGGCTATATTGACATAAGTAATTCGAATCTGCAGCCCACTGCTCAAGAGTTCCAACCGAGCAGTTCGTGCCAGCCGCAGAATGGCGATCTGCGACGGCATGCGTCTCACGGTGCCGTTAGAAAAAGTAATCATTTTCTAAATAGTCAACCATCTTCATCCAGCCATCCGGCTAAATCGTCGTCAAAGACGAAGAACAACAGTAAACATGGCGgccgaagaaagaaagacgAAGCAGCAGCTGCGTCCGTGGTACAGGAAGATGTGAGGTCGGGTCAAACTGACAGAAAAACGTCTGATTATAAGCAAGAGACTCAGAGAGATATGAATCATTCCAAGGGAAATCGAAATCATAATAATCCTGCaagttcaaattcaagttaTCAGAGACGTAACaataattttgtaaacaataagtttaataagAATAGCAAATCTAATAGTTTTAATGGCAGTAATGGCGGAAAACCAGTCAGATATGATTATGCGATTGAGAAATCTTCCAGTTCTAGTACCAACTGGCGTCAAAGGGGTGAAATCCCTAATCAGAAACAAGAAAGTTCTAGAAATAAACCGGAATCATCGAATACTAACTCGGAGAAACAGGGTAAACAAAAAGAAGGGAACAATGGGCCAAACTTCAAGAAAAAACTGGACGCAGCATCCCAGCGTGAACGTCTTGAGCAAATGGTGACTCACCGAATGCTGGAATGTTTGGTGTGCTGTGAAAAACTTCGCCACACTGACAAGATATGGTCGTGTAAGCAGTGCTACCACATTCTGCACCTGCATTGTGTGCAAAAGTGGGCGATTTCCTCCAAGTTGGAAGCTGGCTGGCGATGTCCCGCCTGCCAAAACGTGCTTTCAGAGACTCCCCGAGAGTACCGATGCTTCTGTGATAAATACTTCGAACCCAGGTTCGAGCCAGGCTTACTGCCGCATAGCTGCGGCGAAGTGTGCCAACGAAAGGGGCGCAACTGCGAGCACAAATGCACATTGTTATGTCATCCGGGCCCCTGCCCGGACTGCACTGTCATGGTTCAGCGTTCCTGCGGCTGTGGCCGTAAAACAATGACAGTCCAATGTAAATCCCAAATAGAAGTCCTCTGCGAGGACATTTGCGGTAAAGATTTGAACTGTCACTCGCACAAATGCAAGGATAAATGTCACTGGGGCGACTGCGCTGAATGCACCGAAAGTGTAAGACAAGAGTGTTACTGTGGCAAACAAGGGCGCAAAGTTAAATGCACCCTGGAAATGCAGAGAGTTACAACGTACATCTGCGGAGATGTTTGCGATAAGCTCCTGGCATGTGGCAATCACACGTGTAAGAAACAATGTCACGAAGGTCCCTGCGAGGAATGCGTCCTGGACCCGAAGTTTATTAACACTTGTCCGTGTGGCAAGACGCCATTACAGATGGAGCGCACTTCATGTCTAGATCCAATTCCTTGCTGCACGTCCATCTgcgaaaaacaattgaagtgCGGCCAGCCGAGTGATCCACATCGACCAATGCCTTGCGGGCAGCATAGGTGTATACAAACTTGTCACAAAGGGCTTTGTCCCATGCCGTGCACCCAGCCATGTATATCGCAGAGGTTAAGCTGCGAGCACAACTGCAACCAGCCTTGCCATCAACCTCCATGTCCGAACACCCCATGCAAGCAGACGGTGGTGGTTACTTGTCAATGCGGGTTACGGAGTAGTACCCGCGTTTGTAATGATTTGGCCGGCGAGTATCAGAAAATAGCAATGATGCAACTCGCTTCCAAAATGGCGGATATCCAACGGGGGCAGTCTGTCGACATTGGCGATATTGTCAGCAACCGAAAGCGCAGTGGCACACATAAAACGTTGGAATGCAATGACGAGTGTCGATTAGTGGAACGCAATCGCCGACTTGCTATTGGTTTGCAAATACGAAACCCTGATCTGAGTGCCAAACTCACCCCGCGATATTCAGACTACATGAAGCAATGGGCAAAGAAAGATCCTAAATTTTGTCAGGACATCCATGACAAGTTGACTGAGCTGGTGAAATTGTCGAAGGAGAGCAAACATAAGAGTCGGTCGCATTCGTTTAAGTGCATGAATCGCGAGAAGCGCCATTTCGTGCACGAATACTGCGAACACTTTGGATGCGAGAGCGCTGCTTATGACGCCGAACCGAATCGCAATGTTGTTGCTACAGCTATTAAGGACAAGTCGTGGCTGCCTAGCTGTAGTGTCATCGAACTGATACAACGAGAAAGTGGGCAACGCAAGGTCCCAGGACCACGGCCCCCTACGCCGCCTGCGGAATTCAAAGACTACTTTGACGACCCGCCAGTCTAG
- Protein Sequence
- MSNWNQSWQRDDYRQRAPQTPANFLTLEQIELQQQLNSIVHRDKHSQGPGSSSQFGYIDISNSNLQPTAQEFQPSSSCQPQNGDLRRHASHGAVRKSNHFLNSQPSSSSHPAKSSSKTKNNSKHGGRRKKDEAAAASVVQEDVRSGQTDRKTSDYKQETQRDMNHSKGNRNHNNPASSNSSYQRRNNNFVNNKFNKNSKSNSFNGSNGGKPVRYDYAIEKSSSSSTNWRQRGEIPNQKQESSRNKPESSNTNSEKQGKQKEGNNGPNFKKKLDAASQRERLEQMVTHRMLECLVCCEKLRHTDKIWSCKQCYHILHLHCVQKWAISSKLEAGWRCPACQNVLSETPREYRCFCDKYFEPRFEPGLLPHSCGEVCQRKGRNCEHKCTLLCHPGPCPDCTVMVQRSCGCGRKTMTVQCKSQIEVLCEDICGKDLNCHSHKCKDKCHWGDCAECTESVRQECYCGKQGRKVKCTLEMQRVTTYICGDVCDKLLACGNHTCKKQCHEGPCEECVLDPKFINTCPCGKTPLQMERTSCLDPIPCCTSICEKQLKCGQPSDPHRPMPCGQHRCIQTCHKGLCPMPCTQPCISQRLSCEHNCNQPCHQPPCPNTPCKQTVVVTCQCGLRSSTRVCNDLAGEYQKIAMMQLASKMADIQRGQSVDIGDIVSNRKRSGTHKTLECNDECRLVERNRRLAIGLQIRNPDLSAKLTPRYSDYMKQWAKKDPKFCQDIHDKLTELVKLSKESKHKSRSHSFKCMNREKRHFVHEYCEHFGCESAAYDAEPNRNVVATAIKDKSWLPSCSVIELIQRESGQRKVPGPRPPTPPAEFKDYFDDPPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -