Basic Information

Insect: Aleochara bilineata
Gene Symbol: Sall1_1
Assembly: GCA_003054995.1
Location: NBZA01005660.1:1703-4657[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.3 1.6e+02 3.0 0.0 2 23 6 27 5 27 0.92

2 14 0.47 54 4.5 1.2 1 23 472 495 472 495 0.88

3 14 0.01 1.2 9.7 0.1 1 23 633 655 633 655 0.97

4 14 2.9e-06 0.00034 20.9 1.4 2 23 658 679 657 679 0.97

5 14 0.012 1.4 9.4 1.3 1 23 685 707 685 707 0.98

6 14 8.9e-06 0.001 19.3 3.3 2 23 714 736 713 736 0.96

7 14 0.00084 0.098 13.1 1.0 1 23 746 768 746 768 0.96

8 14 5.2e-05 0.006 16.9 1.0 3 23 775 796 774 796 0.97

9 14 0.045 5.2 7.7 0.0 2 23 812 832 811 832 0.96

10 14 1.9e-05 0.0022 18.3 1.3 1 20 838 857 838 860 0.93

11 14 7.2e-05 0.0084 16.5 0.7 1 23 868 890 868 890 0.99

12 14 0.0014 0.16 12.4 5.5 1 23 896 918 896 918 0.98

13 14 2.5e-07 2.9e-05 24.2 3.3 1 23 924 946 924 946 0.98

14 14 0.00041 0.048 14.1 6.6 1 23 952 974 952 975 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.3	1.6e+02	3.0	0.0	2	23	6	27	5	27	0.92
2	14	0.47	54	4.5	1.2	1	23	472	495	472	495	0.88
3	14	0.01	1.2	9.7	0.1	1	23	633	655	633	655	0.97
4	14	2.9e-06	0.00034	20.9	1.4	2	23	658	679	657	679	0.97
5	14	0.012	1.4	9.4	1.3	1	23	685	707	685	707	0.98
6	14	8.9e-06	0.001	19.3	3.3	2	23	714	736	713	736	0.96
7	14	0.00084	0.098	13.1	1.0	1	23	746	768	746	768	0.96
8	14	5.2e-05	0.006	16.9	1.0	3	23	775	796	774	796	0.97
9	14	0.045	5.2	7.7	0.0	2	23	812	832	811	832	0.96
10	14	1.9e-05	0.0022	18.3	1.3	1	20	838	857	838	860	0.93
11	14	7.2e-05	0.0084	16.5	0.7	1	23	868	890	868	890	0.99
12	14	0.0014	0.16	12.4	5.5	1	23	896	918	896	918	0.98
13	14	2.5e-07	2.9e-05	24.2	3.3	1	23	924	946	924	946	0.98
14	14	0.00041	0.048	14.1	6.6	1	23	952	974	952	975	0.95

Sequence Information

Coding Sequence: ATGGAGGGGGCGATTATGTGCCCCGTGTGTACGCTCTACCTGCGGCCTGGAATGAACCTCCAGTCCCATCTGGAGCTGCACTCCAAGCAGAAAGTCATTGAAGCGCTGATCAAGCTGCAGGCCAAGCCCGAAAAGCCTGATCTCGAGGTCGTACCCCTAGTGGCGCAGACACCAAACATCGAGGCTCAACCCAATCCGCAGCCGCAATGGATGGGTGCCCCGTCAAACAACTGCCTACCATCAGTGCCCATCTTCGCCCCTGGGCAGCCCATGCCCGTGGCACAGCCGCATCCACAGACTCCTGCCGGGGGCAATCACTCTTTCTTCTACCAGCAGTTCATGAGCTCGTCAACGCCGCAGCCCGGAAGCTACATGAACCAGCAATACGTGACAATACCCATCTTCAACCAGCAGCAGCCAGTGCCCTTCCCTCAGTACGTGTACCAACAGCAGCAAGTGTTTGTCTCCACAGGTCCCCCTTTGCCAAAAGTTTTGCCTATAGCCGAGGGGGCCAGTATCTCTGAGGAGTTGCCTCAAATCAATGAGCTTCAAGACGACCATGAGGAGGCAATGCAGCAGGGAAATACCAGAAAACTACCGATTATTCTCAGCGCTCACACACTTTCAAGTTCAAATATGAACGCAAGTATTATAGGAATGCCTGCATTGGAAAGCGCTTTAATAACGGAAGAAGATGATACTAAAAAGCAGGATATTAAAGAAATTGAGGTTAATTCAGAGGAAATTCAGGATTTGGAAGCGCCCGATGAGGATTTGGATAAGTCATGTCAGACTCCCCATGAGGAGCCGCCATATTTAGAGCCGGAGGTGCAGATTGACGCTAAAAATTTAGAAGAGAACAAGGACAGTATCACCTTAGGAAGTGAAGTTGTTCAATTGCATGACCAAACCTACGGGGAACATGGAACAACCACTGACAATAACAACTTTGACATGGACGGCATGAACCTGATCTTAGGGCATGAGTACGTTCAGAGTCAGAATATCATCCCGGGGACGCCCGAGGACTATGATTGTTCGAACAGCATATTTAAATGCGAACGACCTGCCATCTTGATGAACATCAACGAATATTCAGACAATCGTGATGAAATTTCCATTGATAGTGTGAATATTCGGTCGGATGAGAATATGCCCCCTAGGGGGGAGCTCTCAGGGCAGGAAAGCAATGCCAGCGACGTGGCTTCTTGGTCCAAGTTGCAATACCATGAAGGGTCTTCTCGCATGTCCACGGGCATGTCCACCTATGATCTTTTAGCCCGCGAAAGCTGGGAGGGCTCTGATGTTTCAGACACGGACACAGCGCCGCCCCCGTATCAAAGTCGGAATCCTCCGTACATCGACCGCGATGACGATATCATAATGTCAGGCAGTTCCAGGCAGGGCATCAATTATAAGTGCAGTTCCTGTGATTTAGTCTTCATTTGCCCGAAGGAACGCCGCGTGCATCAGTCGGAAATTCACGGGACAAGCACTTCTTCGCAGAATTCTCAAATGGACTTGGAAAGTAATGAGAAACCCACCACCATTACCACTTCGAATGTAGGCTCTTTCCGCAGAACGGTTAAGAAACTGATCATCAAGCCAAAGAAATCCGAGAGCCCCTTAAAGACTGAAGGCCCTCATTGCATGGAGGGCCCCTTTGACCATATCTTCAACAACTTGAACATCCTGAATCTGGACGGGGAGTCCAAGGGCGCTGGGGAGTCCAAGAATGAGACTGAAAGGCACGCTGAAATGGCGACCGAGGAGCGCAAACTGATGACGGCCATGCGTCCGGTGGTCATTTGTGTCATTTGCTGTTCAGTGGTCAGCGACGGATTGACTCTGAGAAGACATCAGATAGAGTTGCATAATTTCAGCTCGGAAGCTAAGTATAAATGCGGCGTTTGTCTAGAAGAATTCACAAATGAACCGCCGTACACTCGCCATTTGATCTTGCATCCTCTCGAGTGTCAGCAATGCGGCAAGCATTTCAATCGCGCTGCGAATCTGCAATTGCACGTCAAGCGCCATCTTGGCATTCGGCCCTATAAGTGTCTATCTTGTGAGAAGTCCTTCCTCACGAGGCAGAAGCTCCAGGAGCATGAGAATATCCATACGGGGGAAGCGCCTTTAAAGTGCAACCTCTGTCCGGAGACGTTCAAGCGTCACTCGAACTTAATTCAGCATCGGAATCGGCGCCATCTTCTGCTGAAGAAGCGCGTCAAGGATTTCATATGCTCCACCTGCGGGGAAATCTTCCACTCGAAGAAGAAGCTCGCGTGGCATAAGGAAATCCACGATAACAAACCCAAGAACTGTCCGTATTGCAGCGAACGGTTTGTGCATATGGCCAGTCTCACTCGGCATGTGCGACGCGCGCATAATGAACGGTTTGTGGCCGAGAGCGAGAAGATGGAGGACAATGTGGAGTGCCCGATATGCAAGGGCATTTACATGCGCAGCTCCCTGGAGGCGCATATCAAGAACCACAGCAGGGTGAAGAGCTACACGTGCTCGGTGTGCGACAAGGATTTCAGCACCAAGTGGAATCTGAAGTTGCACAAGTGGACGCACACGGGGCGCGCCCTCAAGCCCTTCAAGTGCGAAATGTGCAAGAGCGCGTTCGTGCGCGAGACTGACTACACGGCGCATATGAATTCGCATAAGTCCATTCGGCCGTACACGTGCAATCATTGCGGGGCGCAGTTCATCAGGAAGTATAATTGTCAGCGGCATGTGAAGGAGCACGAGCGCGATAAGCGGTTCACGTGCAACATTTGCGGGAAGAATTTCCATCGCTCGTATTATCTCAATGATCATATGCGCGTCCATAGCGGCGTAAGGCCTTTTGCATGTCACATTTGTGGGAAGACTAGCACCACGAAGAGCAATCATAATAAGCATGTGCGCATTCATCATGCTCGCGAACCTGTTAGCACTGAAAACTAA
Protein Sequence: MEGAIMCPVCTLYLRPGMNLQSHLELHSKQKVIEALIKLQAKPEKPDLEVVPLVAQTPNIEAQPNPQPQWMGAPSNNCLPSVPIFAPGQPMPVAQPHPQTPAGGNHSFFYQQFMSSSTPQPGSYMNQQYVTIPIFNQQQPVPFPQYVYQQQQVFVSTGPPLPKVLPIAEGASISEELPQINELQDDHEEAMQQGNTRKLPIILSAHTLSSSNMNASIIGMPALESALITEEDDTKKQDIKEIEVNSEEIQDLEAPDEDLDKSCQTPHEEPPYLEPEVQIDAKNLEENKDSITLGSEVVQLHDQTYGEHGTTTDNNNFDMDGMNLILGHEYVQSQNIIPGTPEDYDCSNSIFKCERPAILMNINEYSDNRDEISIDSVNIRSDENMPPRGELSGQESNASDVASWSKLQYHEGSSRMSTGMSTYDLLARESWEGSDVSDTDTAPPPYQSRNPPYIDRDDDIIMSGSSRQGINYKCSSCDLVFICPKERRVHQSEIHGTSTSSQNSQMDLESNEKPTTITTSNVGSFRRTVKKLIIKPKKSESPLKTEGPHCMEGPFDHIFNNLNILNLDGESKGAGESKNETERHAEMATEERKLMTAMRPVVICVICCSVVSDGLTLRRHQIELHNFSSEAKYKCGVCLEEFTNEPPYTRHLILHPLECQQCGKHFNRAANLQLHVKRHLGIRPYKCLSCEKSFLTRQKLQEHENIHTGEAPLKCNLCPETFKRHSNLIQHRNRRHLLLKKRVKDFICSTCGEIFHSKKKLAWHKEIHDNKPKNCPYCSERFVHMASLTRHVRRAHNERFVAESEKMEDNVECPICKGIYMRSSLEAHIKNHSRVKSYTCSVCDKDFSTKWNLKLHKWTHTGRALKPFKCEMCKSAFVRETDYTAHMNSHKSIRPYTCNHCGAQFIRKYNCQRHVKEHERDKRFTCNICGKNFHRSYYLNDHMRVHSGVRPFACHICGKTSTTKSNHNKHVRIHHAREPVSTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -