Basic Information

Insect: Aleochara bilineata
Gene Symbol: ZIPIC
Assembly: GCA_003054995.1
Location: NBZA01000121.1:62475-66422[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0011 0.13 12.7 3.7 1 23 94 116 94 116 0.97

2 23 0.037 4.3 7.9 1.2 1 23 122 144 122 144 0.91

3 23 7.1e-05 0.0082 16.5 1.0 2 23 150 171 150 171 0.97

4 23 0.016 1.8 9.1 1.5 1 23 177 199 177 199 0.95

5 23 0.0033 0.38 11.2 1.8 2 23 214 235 213 235 0.96

6 23 2.6e-06 0.0003 21.0 0.3 1 23 261 283 261 283 0.98

7 23 1.5e-06 0.00017 21.8 0.4 1 23 289 311 289 311 0.98

8 23 0.00014 0.016 15.6 0.4 1 23 317 340 317 340 0.97

9 23 5.7e-05 0.0066 16.8 5.0 1 23 350 373 350 373 0.97

10 23 1.3e-06 0.00015 21.9 1.4 1 23 447 469 447 469 0.98

11 23 2.2e-07 2.5e-05 24.4 0.2 1 23 475 497 475 497 0.99

12 23 0.013 1.6 9.3 1.9 3 23 504 524 503 525 0.95

13 23 0.00043 0.05 14.0 4.2 1 23 559 582 559 582 0.97

14 23 0.00031 0.036 14.5 0.1 1 23 587 609 587 609 0.97

15 23 8e-06 0.00093 19.5 5.6 1 23 615 637 615 637 0.98

16 23 0.0093 1.1 9.8 5.3 1 23 642 664 642 664 0.97

17 23 1.7 2e+02 2.7 0.0 10 23 716 729 714 729 0.89

18 23 2.8e-06 0.00033 20.9 1.0 1 23 735 757 735 757 0.99

19 23 0.00013 0.015 15.7 1.7 1 23 765 787 765 787 0.98

20 23 0.00033 0.038 14.4 11.6 1 23 793 815 793 815 0.98

21 23 4.2e-05 0.0049 17.2 0.6 2 23 916 938 915 938 0.97

22 23 7.2e-05 0.0084 16.5 3.1 1 23 941 964 941 964 0.89

23 23 0.0015 0.18 12.3 0.2 1 21 970 990 970 991 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0011	0.13	12.7	3.7	1	23	94	116	94	116	0.97
2	23	0.037	4.3	7.9	1.2	1	23	122	144	122	144	0.91
3	23	7.1e-05	0.0082	16.5	1.0	2	23	150	171	150	171	0.97
4	23	0.016	1.8	9.1	1.5	1	23	177	199	177	199	0.95
5	23	0.0033	0.38	11.2	1.8	2	23	214	235	213	235	0.96
6	23	2.6e-06	0.0003	21.0	0.3	1	23	261	283	261	283	0.98
7	23	1.5e-06	0.00017	21.8	0.4	1	23	289	311	289	311	0.98
8	23	0.00014	0.016	15.6	0.4	1	23	317	340	317	340	0.97
9	23	5.7e-05	0.0066	16.8	5.0	1	23	350	373	350	373	0.97
10	23	1.3e-06	0.00015	21.9	1.4	1	23	447	469	447	469	0.98
11	23	2.2e-07	2.5e-05	24.4	0.2	1	23	475	497	475	497	0.99
12	23	0.013	1.6	9.3	1.9	3	23	504	524	503	525	0.95
13	23	0.00043	0.05	14.0	4.2	1	23	559	582	559	582	0.97
14	23	0.00031	0.036	14.5	0.1	1	23	587	609	587	609	0.97
15	23	8e-06	0.00093	19.5	5.6	1	23	615	637	615	637	0.98
16	23	0.0093	1.1	9.8	5.3	1	23	642	664	642	664	0.97
17	23	1.7	2e+02	2.7	0.0	10	23	716	729	714	729	0.89
18	23	2.8e-06	0.00033	20.9	1.0	1	23	735	757	735	757	0.99
19	23	0.00013	0.015	15.7	1.7	1	23	765	787	765	787	0.98
20	23	0.00033	0.038	14.4	11.6	1	23	793	815	793	815	0.98
21	23	4.2e-05	0.0049	17.2	0.6	2	23	916	938	915	938	0.97
22	23	7.2e-05	0.0084	16.5	3.1	1	23	941	964	941	964	0.89
23	23	0.0015	0.18	12.3	0.2	1	21	970	990	970	991	0.94

Sequence Information

Coding Sequence: ATGGAAATTCAAGTCTCTAATGGTTTATACGTAGATCTAAATACAATCACAcagcatgcaaatgaaatttacattgctGCTTCTGCGGATAATCAACAAGAATTTGCAGCTACAACGTGTGAAAATGgtattttaaacttattaagTGAAAATAATTCAGCTATACTTCAAGTATCAGCTGATCCAACCAATAACCCTGGTTCAAACATTCATCTAGGATCAGATGAAAAGAGTAACAATGCCTTGGTTAAAATGCCAAAgccagaaaaacaaaagaactaTATGTGTTTGCTctgcaataaaaagtttagCTTACACTCGCAATATCAATTGCACATGGTTAAGCACAAATCACCAAAGAAGTATCAATGTGCATTTTGTTCCAAAGGTttcaacaaagaaatcaattacaaaCTGCATTCAGTACAACACAGCACCGATTCACCGAGTTGTCCAGTTTGTGGGTTGAAATATCACAGACAAGCCAGTTTAAAATCTCACTTGAAAATTCACGAAGTTGAAGAATCGCATGCgtgtttgcattgcaatgcggaGTTTGACAAGGAAACAGAATTATACAAACACTTAGAAGTGCACGAGGGCGAAAACATTCAAGTTCCCGTGAATGAAATCCCGCTGTGTTGCGATTACTGCAATTATATGTTTTACGATGGCGAAAAGTATAAGGAGCATATACGTTTGCACATCAAGGCGAGAAGCTTTTTAGCCAGTCGTCGACCTCGCAATTGCAATACGAAGAAAAGACGAGGGGGCAAGGAATTTACTTGCGAAATTTGTGCAAAAAGTTTTGCAAAGCGCGCTTTTTTGGAGCGACATATTCGGGTACATACCGGAGAGAAACCGTTCAGTTGTCCAATATGCAACAGCAGTTTCTCTCAGAAGAACACATTACAGGCACATATTGATACACATAAAGGTAAAAAGCCATTTCAATGCATGTTTTGCGTGGCGTCGTTCGTGCAGAAAGGAAATCTACGGGCGCATCTTTTAAAAACGCATTCGGTGGGCGCGCCAGGTGAGAAGGTATTCAAGTGCACGCATTGCACTTGTGTTTTTAAGAGTCTATCTTCGCTGAATGCACATATCACGCGTTTGCATTCGACCGCCGACGAGGGTGATGAACAACAAAAGATTTTAGACATTGTTTCGCAGTTGAAAGAACTTGATAGGAAAACTACGCCAGGGAATGGTAATATTGATAGTTCCGTGCAGTTCCCTGAGACGAAAATCTCATATGTAAAGGTTGCGGATACCAGTATTACTGGTGATATTCAAACTTGCGTGCTTAAACAACGTACAACAGGCGAGCATCGTTGGTTCATTTGTACCTTTTGTAATAAAGAATTTAAGAAACCTTCGGATTTAATTCGACATAAACGGATACACACCAGAGAGAAACCTTATAAGTGTCCGGAATGTGGAATTGCATTTTCACAGAAATCAAGTGTTGTCAGCCACATGTCAACACATACTAACAATGAATTGCTCTGTGGTATTTGTAAAAAGCGCTTTGGGGCCACTAAATCActaaatttgcatataaaGCAACATCATACACATAAAATTGAAAGTACTGATGATAAATCAAGGAAAACGACAAGATCCaaagtaagtttaaacaatgatATTACGGATAAAGGTAAGTCCAAGCCCTACAGTTGCCCAGTCTGCAATGCTTCGTTCACTCGCAAGCATTATTGCGAGAAGCATATTCGCAATATCCATGCGAAACGAGAGTTTCCCTGTCCGGTTTGtgcaaaaCGTTTTGCAACTCAATTAGCTTTAACAGAACACACCTTGTATCATACAAAACTGCGGAAATTCAAATGCACGGAATGTAATAAGTGCTTTATGAATCTAAGCATGCTGAAAAGACATTTATTCACGCACAAATCAAAGACGTTTGTGTGTTCATACTGTAAAAAGCGATTTAAGGCTAAAGAGGACTGCAAGAAGCATTTGGAAAGGCACAGGCTTGATACGTTTGAAGAAGAGGATAAGTCAACTGAGTCTTCAAACTTTGTGAATGTTAACGTTATATCAACTGCAGACGAGATTCCGCATATTAATATTCCAGAAGTTTCAGATGTACAATGGCTGTataatttcaacaatattgaaatatttgggTATCAAGATGGTTTGGATCGTCATGTAAGAACTCACACTGGAGAAAAACCCTTCAAATGTCCAAAGTGCGGTAACCGATTTGCCATCAAATCCACCCTAATGTCGCATCTTCGAACGCATGAACCTTTGAATACCAAGCAGTTTCAATGCAAAATCTGCAATGCTTTCCTTAGTACGAAATCGGGCTTGAGAACGCATACGAAAAACCACATGGATAGACCTCACTTCGAATGTGACATTTGCAAGAAGACATTCAAACATAAACACCATTTCACCACGCATTTCAAGACGCATCTCAACCCGAAAAAGTCCACGAAGATGAGCGCCGTTGATATACTTCAATCAGTGGTTTATGAGACCAACAACCAGATTAACAATGTGCAAGTCGCTGAGGGTTTTTCAAATGAGAAGTTGTTTGAGGAGGAGATACCAGTACTTGTAGATAACATGGAACCCGTCACCATAACTTTGGCATATAATCCGGAAAATTTAGGCATTAACCTGGCAAATACCAGTCTGATGCACCAGGCcgataatataattttaaataatgttgaAGTAATACAAGAACAACCAATAATCGAGAGCAAAGTCCAGTGCAATTTGTGCAATAAGTTATACGCGAGTAATTCGGTATTAAGAAAGCATCAGAGGACAGTACATGGAgattttaaatgtgaaaagtgTGGTAAAGCATTCAAAACCGCATCTTTCTTGGAGGAACATTGCAATAGCACACATTATGGCCATAGGCCTTTTAATTGTGACATTTGTTCAAATAGTTTTACAAAGGAAGCGGAATTGAAGGTTCATGTGAAAAGGTACAGCACagataacaataattttattgctttttaa
Protein Sequence: MEIQVSNGLYVDLNTITQHANEIYIAASADNQQEFAATTCENGILNLLSENNSAILQVSADPTNNPGSNIHLGSDEKSNNALVKMPKPEKQKNYMCLLCNKKFSLHSQYQLHMVKHKSPKKYQCAFCSKGFNKEINYKLHSVQHSTDSPSCPVCGLKYHRQASLKSHLKIHEVEESHACLHCNAEFDKETELYKHLEVHEGENIQVPVNEIPLCCDYCNYMFYDGEKYKEHIRLHIKARSFLASRRPRNCNTKKRRGGKEFTCEICAKSFAKRAFLERHIRVHTGEKPFSCPICNSSFSQKNTLQAHIDTHKGKKPFQCMFCVASFVQKGNLRAHLLKTHSVGAPGEKVFKCTHCTCVFKSLSSLNAHITRLHSTADEGDEQQKILDIVSQLKELDRKTTPGNGNIDSSVQFPETKISYVKVADTSITGDIQTCVLKQRTTGEHRWFICTFCNKEFKKPSDLIRHKRIHTREKPYKCPECGIAFSQKSSVVSHMSTHTNNELLCGICKKRFGATKSLNLHIKQHHTHKIESTDDKSRKTTRSKVSLNNDITDKGKSKPYSCPVCNASFTRKHYCEKHIRNIHAKREFPCPVCAKRFATQLALTEHTLYHTKLRKFKCTECNKCFMNLSMLKRHLFTHKSKTFVCSYCKKRFKAKEDCKKHLERHRLDTFEEEDKSTESSNFVNVNVISTADEIPHINIPEVSDVQWLYNFNNIEIFGYQDGLDRHVRTHTGEKPFKCPKCGNRFAIKSTLMSHLRTHEPLNTKQFQCKICNAFLSTKSGLRTHTKNHMDRPHFECDICKKTFKHKHHFTTHFKTHLNPKKSTKMSAVDILQSVVYETNNQINNVQVAEGFSNEKLFEEEIPVLVDNMEPVTITLAYNPENLGINLANTSLMHQADNIILNNVEVIQEQPIIESKVQCNLCNKLYASNSVLRKHQRTVHGDFKCEKCGKAFKTASFLEEHCNSTHYGHRPFNCDICSNSFTKEAELKVHVKRYSTDNNNFIAF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -