Abil009654.1
Basic Information
- Insect
- Aleochara bilineata
- Gene Symbol
- bab1
- Assembly
- GCA_003054995.1
- Location
- NBZA01001918.1:8502-10273[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.9e-14 6.2e-11 41.8 0.1 2 45 309 352 308 352 0.93
Sequence Information
- Coding Sequence
- ATGTATAACAACGCGCAGCACTACTGCTTGCGCTGGAACAACCACCGAACGAACCTGCTGACCGTCTTCGACGAGCTGCTGCAGAACGAAGCGTTCACGGACGTGACGCTCGTGTGTGACGGCGGCGGGCCTATAAGATGCCACCGCATGGTGCTGGCCGCCTGCTCGCCGTACTTCCAGAACCTCTTCACCGACCTGCCCTGCAAGCACCCCGTGGTGGTCCTGAAGGACGTGCGCTACTCGGACATCAAAGCCATATTGGACAGCAGCGCCGAGTCGCCGCCACATTCCACGAACAACGGCTTCGTCCCCTACGCCAAGAGCCCTTACAACATGTACAACAAGAAaccctcgtcctcgtcctcgacCTACAGCGCCGTGGCAGAGTCGCAGAGCTCGCCGCGGATGAACATTCCAATGTGGCCCGGGATGAGCATGCCCCCCGGCAGCCAGTCGCCCCCCGACCACCATCACAGCTCCCCTTCAGCCTccgcctccgcctccgccTCTGCCGTATCCGCCGCCGCGATGCTCAGCAACTGCTACCAAGCCGGCAGCACCGACATGAACCCCCTGAAGCGCAAGAAACTGTCCTCTCTGCTCATGAGCCGCGACACCCCCATTCTGCGCACCGTCCTCGGCCAGGCCGATTCGTCCCAGCCGGTTAGCCTAGTGTGCCATCCAGATGAAAGCACCGCAAATgtcaattccaattcaaatGGCGTTGAAGAAGCCCCAGAGAAGCATATCAAGACTGAACCGTCTGAAGGAGCGCAGTCGCCCTTTACAGACATCTCGATGGAATACGACGAAAAGAAACTGATCATGAACTCGTCCTATGGCAGTGGTGGCATGTCAGGGATAGCCACGTACGTCCCAAGCACAACGGTCAAGCCCGAGTGGAAGAGGTACAAGCAATACACGCGCAACGACATCCTCTCTGCGATTGAGGCAGTGCGTAATGGAATGTCCGCACTGCAAGCCGCCCGCAAGTATCACGTGCCCTCGCGGACCTTGTACGACAAGGTAAAGAAATTGGGGATTACCACGAGCAGGCCCTTCAAACGCACGGTCAGCAGCACCGGGACCAACGGCAGCAGCAACCCCAATAACAACCTGGGCTTCCCGTACGGCATCACTGGTACCAGCTCTCCCTTCGGCATGGACTCCTCCAACGAGCAcagcatcaacaacaacagttcCTTACTAGAAGCCAGCAGCATTCTGCAGCACGCTCTGGACGTCAGGGACGACAAAGAGGCCCTTGCGGCAATGCAGGTTATCATGCCGCCGCTCAACATGTCCTCGATCATCAAGAAGGAGGAGATGCTCAAGGAGACGCTCATGGAAGAGATGCGCCGCGAGGTAAGCGTCGACAATGCGGATTAA
- Protein Sequence
- MYNNAQHYCLRWNNHRTNLLTVFDELLQNEAFTDVTLVCDGGGPIRCHRMVLAACSPYFQNLFTDLPCKHPVVVLKDVRYSDIKAILDSSAESPPHSTNNGFVPYAKSPYNMYNKKPSSSSSTYSAVAESQSSPRMNIPMWPGMSMPPGSQSPPDHHHSSPSASASASASAVSAAAMLSNCYQAGSTDMNPLKRKKLSSLLMSRDTPILRTVLGQADSSQPVSLVCHPDESTANVNSNSNGVEEAPEKHIKTEPSEGAQSPFTDISMEYDEKKLIMNSSYGSGGMSGIATYVPSTTVKPEWKRYKQYTRNDILSAIEAVRNGMSALQAARKYHVPSRTLYDKVKKLGITTSRPFKRTVSSTGTNGSSNPNNNLGFPYGITGTSSPFGMDSSNEHSINNNSSLLEASSILQHALDVRDDKEALAAMQVIMPPLNMSSIIKKEEMLKETLMEEMRREVSVDNAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00048746;
- 90% Identity
- iTF_00048746;
- 80% Identity
- iTF_00048746;