Abil003564.1
Basic Information
- Insect
- Aleochara bilineata
- Gene Symbol
- bab2
- Assembly
- GCA_003054995.1
- Location
- NBZA01016806.1:25282-29711[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-16 2.7e-13 49.3 0.0 1 42 354 396 354 399 0.95
Sequence Information
- Coding Sequence
- ATGTCTACGCAACAGTATTGTCTTCGGTGGAACAACCACCAGCCGAACTTCATATCCGTGTTTTCGAACTTACTCAACAGTGAGTCACTTGTTGATGTTACCCTTTCTGCGGATGGGAGGCACTTGCAAGCACACAAACTTGTGTTGTCTGCCTGTAGTTCATACTTCCAGTCATTGTTTACAATGAATCCGTGTCAACACCCTATAGTGATCTTAAAAGATGTGAAGTTCACTGACTTGAAAGTGATTATAGACTTTATGTACTATGGAGAAGTGAATGTGTCGCAGGATCAATTGCCACATATTTTGAAAACAGCGGAAGCACTGAAGATTAAAGGCTTAGCGGAAATCCCGGTTGAAGCCTCTGTCAAACAGAGCAACTCTATTGAGAATAAAACAGAACTTTTGGCAGCGGACCCCAATTGGAATGCCCCCGAGAATCAGAGACAGTCAATGTCTCCTTGCCCCTTATCACCGTCAAGTAAAAGAAAAAGATTGCGCAAAACTTCGACAGGATCAGGTTCGGGTTCAACTGAGAAGTATGCAAGTGAAGAGCATTCAAATGAAGTAACTTTGACATCGCCTGCGGGTATGGCGGTTATAAAATCTGATGTTCCCACAACTGATATTCAAGCTAAGAGTAGCCCTAGAGAATTAACCACCACATATGAAAACATTGAATGTTCAGCGCGCCAAATAACTTTGAAACTCCCACCTGAAGTACCAATGCAACAACACGCTGTGGAAAATACTATTGAACTAGCGGGTTCTTCAGCGACGACGCAAACAGTTGCAGGTTACCAATGGGGTATTGTCGATCAACACTATCCACATTTCACCCAAGCCACTCTAACACTTCCCCAAGAATTACAATATACAACTAGCCCACCCTCTTTAGTCCAAACCTATTCCACAACGACCAGTGTCTGCACAGAAAGCGACGGCAATGCAATAGATGCACGCACTcgtccgccgccgccggcagcGACCACGCAATCGGTGATCAACCATGCACCCCAACAAGCGCCCCAGAAACGCAAACGCAGCGTTAATCCGCAATCCGAGGACAATTTCGTGCGAGCGCTGGAGGCGGTGCGCTTCGGCGGCATTGGGTTTTGCAAGGCGGCGCGCATGTTTGGCGTAAATAATCGCACACTGTGGCTCGAATACAAAAAACGCGGGTATCCCAATTACCGGCAAAGTATCAAGCACCGCAAGTCAGATACGACGTCCACTTTGCCCAATAAAGTCAACCAAAGTCCGCCGCCACCAGAGCACACGATCGATTCACCGCAAGACAGTCCGCCATCGCAAAATATACAGCAACATCAAACAACATCTCCGTCACCAACTACAATACAACAGCATCCACATCCTATCACCAGCAACTCGGTTGCAATGATTAGTGGAGCATTCATTGATGGCAGGCCTGTCGAAATCGCCGCACCGGTTCTGCAACGGTCGCGATATTTCGATAACAGCCTACTACACACAACTCCTATCAACTTGCAGAATATAAATCGAGTTATAATCACGACGCATGCACAACTCTCGCAGGCGTCGCAATATACGAACACAATGATGCTGGGGTCAAAGCGGAGTCGCATACTTATGCGGCAATCGCGAATCAAGAAAGATACAGAACCTTCTACGCATACCGATGGAGACTTGCATTACCTTTCCGTCCCACATGTACGAGTCGAACGACAAGTGTCCGACCCATTGCCGACGACAGCTTCGCCGCCCCCAGGACCTCATCTGGCGGTGCCTGGACAGACCATGTTAGTGAAGCAACACTCACATCCGCTGCTTCCCAGTCAAATGTCTTATCAATCGCCAAGCCCTCCGCCAATTATATCCTCACAACTGCAGATAATTCCACAACACTCGTCCGCGTCAGCATCAGGGGAAAGCGAAGCGTATAGTCCCAATACTGAACCGCCCGAAAGTTCGGAAATTCCCACTGCACCAATATTACGCGTAAAATCTGAAGAACTAACGCATTCGCACTCGCGGGTGAAATCAGAAGACTTGTCCACTAGCTCTTTGAAAGTACGTACGGAGGAACTAAAACGCAGCGTTTCCTCACCGTCTCAAACGAACACTCGCTCTAGTCATTGCCCCGTCGTGCGGCCCGGGCCCGCGCTGGGTTGTAACTATTGTTGGAACACGGTCGACACCCACGGAAGGATATTGCGCAGGAAGACAAAGTATCACTGTCCGGAATGCCAAACGAATCTATGCATTGTACCATGCTTTCAAGAGTACCACGAGCGGCATGTGCCATCTTCGGACCCCGTCAGTGCGACGCCaccaattaaaatattcccaAAGACCAGTTCGATGTGA
- Protein Sequence
- MSTQQYCLRWNNHQPNFISVFSNLLNSESLVDVTLSADGRHLQAHKLVLSACSSYFQSLFTMNPCQHPIVILKDVKFTDLKVIIDFMYYGEVNVSQDQLPHILKTAEALKIKGLAEIPVEASVKQSNSIENKTELLAADPNWNAPENQRQSMSPCPLSPSSKRKRLRKTSTGSGSGSTEKYASEEHSNEVTLTSPAGMAVIKSDVPTTDIQAKSSPRELTTTYENIECSARQITLKLPPEVPMQQHAVENTIELAGSSATTQTVAGYQWGIVDQHYPHFTQATLTLPQELQYTTSPPSLVQTYSTTTSVCTESDGNAIDARTRPPPPAATTQSVINHAPQQAPQKRKRSVNPQSEDNFVRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKRGYPNYRQSIKHRKSDTTSTLPNKVNQSPPPPEHTIDSPQDSPPSQNIQQHQTTSPSPTTIQQHPHPITSNSVAMISGAFIDGRPVEIAAPVLQRSRYFDNSLLHTTPINLQNINRVIITTHAQLSQASQYTNTMMLGSKRSRILMRQSRIKKDTEPSTHTDGDLHYLSVPHVRVERQVSDPLPTTASPPPGPHLAVPGQTMLVKQHSHPLLPSQMSYQSPSPPPIISSQLQIIPQHSSASASGESEAYSPNTEPPESSEIPTAPILRVKSEELTHSHSRVKSEDLSTSSLKVRTEELKRSVSSPSQTNTRSSHCPVVRPGPALGCNYCWNTVDTHGRILRRKTKYHCPECQTNLCIVPCFQEYHERHVPSSDPVSATPPIKIFPKTSSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00083996;
- 90% Identity
- iTF_00048719;
- 80% Identity
- iTF_00048719;