Basic Information

Gene Symbol
Kdm5
Assembly
GCA_003054995.1
Location
NBZA01003340.1:20045-24889[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.9e-08 6.3e-05 23.2 0.1 2 40 120 157 119 160 0.91
2 2 2.1 4.5e+03 -1.9 0.0 33 74 1086 1126 1072 1136 0.72

Sequence Information

Coding Sequence
ATGAACGCCAATGTACGGATAATGATGAGCAAAGAAGGCAGCACGAATCTGGGAGCTGCAGGTTCATATTCGTTCGCCACGAGCGGCAGCCGCGATCTTGATGTGTCAGCTCCAGGTGCGCCaagcgaattcaattttctcgTTCCGCCGGAAGCTCCCGTCTTTACACCCACCGAGGCGGAATTCAGTGAGCCCCTAGTGTACATCGATAAAATTCGTCCCATTGCGGAGAAATATGGCATTTGCAAGATTAAACCGCCAGCTAACTGGCAGCCGCCATTTGCCGTCAATGTTGATAAGTTGAAATTTACGCCGCGCATCCAGCGACTGAATGAGCTGGAGGCAAAGACCCGCATCAAGCTGAACTTTCTCGACCAGATCGCCAAATTCTGGGAGCTGCAGGGTTCGTCGCTGAAGATCCCCATGGTGGAGAAGCGCGCATTGGACTTGTACACTCTGCATCGGCTGTTGGCCAAGTATATTTGTCATAATTGCCGGCGTGGTGATGCTGAAGAGCAAATGCTCCTCTGCGATGGATGTGACGACAGCTACCACACCTTCTGCTTGTTGCCCCCGTTGGTAGAGATTCCCAAAGGTGATTGGTGTTGCCCTCGATGCGTTGCAGCTGAAGTATCCAAACCCACGGAGGCTTTTGGCTTCGAACAAGCTCAGAGGGAGTACAATCTACAACAGTTTGGCGAAATGGCCGATACTTTTAAGtctgaatatttcaatatgcCAGTTCACatGGTTCCAACTTCAATGGTGGAGAAGGAATTCTGGCGCATTGTTTCTTCCATTGACGAGGACGTCACCGTTGAATATGGAGCTGATCTTCATACTATGGACCATGGTTCAGGGTTTCCTACAAAAGATTCCATTAACTTGCAAACCGGCGACCAAGAGTACGCCTCTTCTGGTTGGAATCTGAACAACTTGCCGGTTCTAGAAGGCTCGGTGCTCGGATACATCAACGCGGATATTTCCGGTATGAAAGTACCGTGGATGTATGTTGGCATGTGCTTTGCGACTTTCTGCTGGCACAACGAGGATCACTGGAGTTATtccataaattatttgcattggGGCGAGCCGAAGACCTGGTATGGCGTTTCGGGTATGCAGGCAGAACTCTTCGAGAAAACGATGAAGAGTGCTGCCCCCGAATTATTCCAGTCGCAACCTGATTTGCTGCATCAACTTGTTACCATCATGAATCCGAACATTTTGATGAATGCTGGAGTTAAAGTTTTCCGTACCGACCAGCACGCTGGGGAGTTTGTCATCACGTTCCCTCGAGCATATCATGCAGGTTTTAATCAAGGTTATAACTTTGCCGAAGCGGTTAATTTTGCTCCGGCTGATTGGATCGCCATGGGACGTGAATGCGTGATGCATTATTCGCAATTACGTCGCTTTTGCGTCTTCTCACATGACGAGTTAGTATGCAAAATGGCGACCAACTCTGACAAGTTGGACATTACTGTAGCGGCCGCCACCTACACGGACATGCTGCGAATGGTTGAGACTGAGAAAAAGCTTCGGAAGAGTCTGCTCGACTGGGGTGTGACCAATGCGGAACGAGAAGCCTTCGAATTGCTACCTGATGATGAACGACAATGCGAGGTATGCAAGACGACATGTTTCATGTCAGCACTGACTTGCGAATGCACCACGGAGATGCTCGTCTGTCTGCGGCATTATACATCACTGTGTAAGTGTGCTCCAAGTAAGCATACGTTGCGCTACAGATACACCTTAGATGAGCTATTGCCCTTATTGCGTAGCCTTAAACAAAAGGCTGAGTCGTTTGACCGATGGGCAGACTGCGTTAAGAAAGTTCTCGATCGCAAGCATCGTAAAGAGGTCACTTTGAACGAACTGCGATTGCTTGCCAGCGAGGCGGAAGGGAAGAACTTCCCCAAGTCGGAGTTTGTGCAAACCTTGGCGAATGCGATTGAAGATGCGGAAAAGTGCGCCAGTGTGATAAGACAATTGGACTTGAAGAAGGTACGCACCCGTCATTCCTATGATCAGAAGAATAAGTTGACGATGGACGAGTTGCGCTTATTTTACGAAGAGATTGACAGTTTGGCATGCGTTTtggaagaagagaaaattattaaagagcTGTTGGAGCGAACGAATCATTTTGAGAAGGAAGCCACGCGTTTACTGGATGTGGAGCTTTCTGAGTGTCAACTGAAAGATGTCGAGGAGACGATTAGTATCAGTAATGAATTATGCATCGAGTTGCCTTCGTTGAAAGCCTTATCAGATCGTCTTAGTCAATTAAAGTGGGTTAAGGAAGTATACGATGTGCGAAAGAAGCCTGGCGATGTCGCCGATATTGATACGTTGAAGAATTTACTACGCAAAGGCGTCGTTCTGCCGAATGATGCTTTAATTGAAAGTATTATTGGAGATTTACAAGGTGTTATTACGGTCGCTGAAGATTGGGAGGCGAAGGCTCAGGCGCTCTTTAAAAAGTCTGGCGCGGATGTACTTAGCGAAGCTGAAGCCCTGATTAACGCCGCGGGTAATATTAATGTCTATCTGCCGACCGAAAATTTGCTCGTGGATAGCGTAAATAGTGTGAATGAATGGTACAGAAGCCTGCAAGTGATGAATTCGTTGGAATACTATCCGTATTTATCAGCCGTCGAAGATCTCATTAAAAAGAGTAAGAGCTTTCCATTTCAACTGGATGAAGTCGATCGCTTAAAGGGGTATGTGAGCAGTGCCAATGCTTGGAAAGATAAAACATCCAAGATTTTTCTTCGCAAACATGTGAACGGAGGTCTCATGGAGAGTCTTTCTCCGCGTGCACACGTTGTGCAGCACAAAAATACACCCGGGCGGAAGAAGGCAGCGGAAGAGTCGGTGAAGGTGGTGGAGACCATGGATCCGACGACTGTTGTACAAATGTTTAAAGATGCTGAAGAGCGCGAGTTACTTTTTATGGATGAGGCGCGAAGTACTAATCGAGCCAAAGTGGTCAGCAAGGAGTCCACGGACACATTCTGTGTCTGTGCGAAACCAGCATCAGGGCTTATGATGCGTTGCGATCTGTGCAACGACTGGTTCCATTCCTCTTGTATTCCGCAATTGCCGCGCATCAGTGGCCGTCGTCTGAGGAAGAACATGAAATCCACAGCTGTGCATTACGGCTTCAAAGACTGTAAATTTCTATGTACACTATGCCACCGTACGCGACGACCCAAGTTGGATGTCATACTGAGCTTGTTGATGGCTTTGCAGAAGCTTTCTACGCGTGTACCTGAAGGTGAAGCGCTGCAGTGTCTCACTGAACGCGCCATGAATTGGCAGGACCGAGCCCGACAACTACTCTCGCGGCCGGACGTCGCAGCCGCCTCGTCTAAGATACAATTGATGGTGCAGAAGTACTCGGACGCGAATGCAGCCAAGAAAACGAACAGCAAGAAGCCCAAAGAGGATGCAATGGTCATTAGTGATGAAGACTCCCAGTCGGCCATAAGTGGCATGTCTTCGGACGAGGAAGACTGCAAAGATGAACATGCCTATTCGATGAACTGCAAGCCGGCATTGGAATCCGATCTTGTCGTTAATCTCTCACCCAATTCGCGCAACTTTCTACTGGAGATGCTTACCGAAGGTGACTTGCTTGAAGTTAGCCTTGAGGAAAATGCCCTTCTTTTTCAGATTTCTTTCATGTCCAGGGACTTTGCAAAGGAGCCTTACATTATCGATTTGGACGATTCTTTGAAATCGCCGTCCACTCCACGAAAAGGGCGAAAACGACGCCTCGAGGAAGATAAGCCAAGGAAAGAGATTGTGAAGAAAGCCAAGGGTAGACGAAGTTTGACCTCTAACGGTAGtagtaacaataatattgGTGGTAAGCAAGTGGCGCGGAAACGTAAGGGGCGTGCGCGTAACTCACAGTCGAGTGACGACGATGCGGACGAGGAGGCAATGTGTGCAGTGTCAACTTGCCTCCAACCCTCGGGCGATGAGGTGGACTGGGTGCAATGTGACGGGGGTTGCGAACAATGGTTTCACATGGCGTGCGTGGGTCTTTCGGCGAAAGACATTAATGAAGACGAAGATTACTATTGCTCGGCATGTTCACCGCCTGAAACTGTTAAGGAACGCTTAAAACTCGCCAATTCCAGTGAATTAGTTATAGAATACTAA
Protein Sequence
MNANVRIMMSKEGSTNLGAAGSYSFATSGSRDLDVSAPGAPSEFNFLVPPEAPVFTPTEAEFSEPLVYIDKIRPIAEKYGICKIKPPANWQPPFAVNVDKLKFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPMVEKRALDLYTLHRLLAKYICHNCRRGDAEEQMLLCDGCDDSYHTFCLLPPLVEIPKGDWCCPRCVAAEVSKPTEAFGFEQAQREYNLQQFGEMADTFKSEYFNMPVHMVPTSMVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKDSINLQTGDQEYASSGWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVSGMQAELFEKTMKSAAPELFQSQPDLLHQLVTIMNPNILMNAGVKVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWIAMGRECVMHYSQLRRFCVFSHDELVCKMATNSDKLDITVAAATYTDMLRMVETEKKLRKSLLDWGVTNAEREAFELLPDDERQCEVCKTTCFMSALTCECTTEMLVCLRHYTSLCKCAPSKHTLRYRYTLDELLPLLRSLKQKAESFDRWADCVKKVLDRKHRKEVTLNELRLLASEAEGKNFPKSEFVQTLANAIEDAEKCASVIRQLDLKKVRTRHSYDQKNKLTMDELRLFYEEIDSLACVLEEEKIIKELLERTNHFEKEATRLLDVELSECQLKDVEETISISNELCIELPSLKALSDRLSQLKWVKEVYDVRKKPGDVADIDTLKNLLRKGVVLPNDALIESIIGDLQGVITVAEDWEAKAQALFKKSGADVLSEAEALINAAGNINVYLPTENLLVDSVNSVNEWYRSLQVMNSLEYYPYLSAVEDLIKKSKSFPFQLDEVDRLKGYVSSANAWKDKTSKIFLRKHVNGGLMESLSPRAHVVQHKNTPGRKKAAEESVKVVETMDPTTVVQMFKDAEERELLFMDEARSTNRAKVVSKESTDTFCVCAKPASGLMMRCDLCNDWFHSSCIPQLPRISGRRLRKNMKSTAVHYGFKDCKFLCTLCHRTRRPKLDVILSLLMALQKLSTRVPEGEALQCLTERAMNWQDRARQLLSRPDVAAASSKIQLMVQKYSDANAAKKTNSKKPKEDAMVISDEDSQSAISGMSSDEEDCKDEHAYSMNCKPALESDLVVNLSPNSRNFLLEMLTEGDLLEVSLEENALLFQISFMSRDFAKEPYIIDLDDSLKSPSTPRKGRKRRLEEDKPRKEIVKKAKGRRSLTSNGSSNNNIGGKQVARKRKGRARNSQSSDDDADEEAMCAVSTCLQPSGDEVDWVQCDGGCEQWFHMACVGLSAKDINEDEDYYCSACSPPETVKERLKLANSSELVIEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-