Ates002214.1
Basic Information
- Insect
- Aleiodes testaceus
- Gene Symbol
- -
- Assembly
- GCA_963565655.1
- Location
- OY751413.1:740794-746105[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 9.1 7.6e+02 1.0 0.2 1 23 79 104 79 104 0.88 2 17 0.0001 0.0086 16.6 2.3 1 23 111 134 111 134 0.97 3 17 0.03 2.6 8.8 1.5 2 23 150 171 149 172 0.95 4 17 7.2 6e+02 1.4 5.4 1 23 178 200 178 200 0.97 5 17 0.0014 0.12 13.0 0.7 2 23 206 227 205 227 0.97 6 17 3.7 3.1e+02 2.3 0.6 6 23 472 489 470 490 0.87 7 17 0.0016 0.14 12.8 2.0 2 21 501 520 500 521 0.94 8 17 2.1 1.8e+02 3.0 1.0 1 23 582 604 582 604 0.82 9 17 0.16 14 6.5 0.3 2 23 799 820 798 820 0.92 10 17 0.011 0.91 10.2 0.5 1 23 828 850 828 850 0.98 11 17 0.087 7.3 7.4 0.8 2 23 930 951 929 951 0.96 12 17 0.069 5.8 7.7 0.3 2 23 962 983 961 983 0.96 13 17 0.028 2.3 8.9 1.9 1 23 1060 1082 1060 1082 0.97 14 17 0.043 3.6 8.4 0.4 1 23 1148 1170 1148 1170 0.97 15 17 3e-05 0.0025 18.3 0.6 1 23 1176 1198 1176 1198 0.97 16 17 0.02 1.7 9.4 4.3 1 23 1247 1269 1247 1269 0.96 17 17 0.0016 0.13 12.9 0.6 1 23 1369 1391 1369 1391 0.98
Sequence Information
- Coding Sequence
- ATGTCGGAACGTTCACCGAGATTACGGGCGTTACGTCCTCGTCATTCTATTATACCAAGATCAACGGAAAAATCATCAGGCGATAGTGAAGCGGAGGGTAATGCAAGTCAAGAGAATGAATCGGAGCTGGAGAATGCTGATGATACGAGGGATGACAGTGATAGTGAGCCGAGGCTTGTTATCAAGGAAGAACCGGAGGATAATGTTgatgagagaattgaagaaaatagaaaatatgtGTGTAATTCGTGTAAGCCATCGCTTGAATTCTCGAGTCTCATTGAGTATCTCCAGCATTTGAAGGCACGACATCAGCAGAAAACGAAGAGTCATCAGTGCTCTTACTGCAGTTATTCTTATCAAAATCCGAAGAAATTGCAGCGTCATATTATAACAGCACACAAGGATGTACAGGGTGAAAAATCCGGGGAAATTGTGCGTAGAAATAAGTGCACAATGTGTAATTTTGTTGCTTATACACCAACGGACATGGAGAATCATCAGCGACTTCATCATTTGAAGAGACGTTTCTTTCGTTGCACCAAGTGCTCGTACATGACTCATGTACGTGCACGTTACACTAAACACGTCAAGTATCATTCTATGCCGATGATAAAATGTGATGACTGTGATTTTCGCACTCCTTACAagtGGAATTTAGATCGACACACTCGGAATcatggtggtggtggtgcattCCAGTGTCATGCCTGTAGTTTCACCGCTGAAATACGTCAGAGTCTGACTGTACACGAAACAAATCACCATGAGCCTCCAATTGGACCTTTCCCAAAGAAAATGAGTCCTTTTGAAAGAAAACCGAGAAATGGTCCAAAGCGTTATAATCAAGTTGGTGCTAGTGATTACCGTGACGTCCAGCCACTGGATAAACCCTCCCAGAATCCCCAGAACCCCGAGAATCCCCGGGAAGAGGAGGAAGGAAAGAATGCCATAGATGGTGCAGACTGTATAGCCTTGAAATGCGAGGAAAAAGGCTGTCAATTCATAACCGCGTGGGATTCAGAGATGCAGAGACACGTAGCTGAATCACACGGTGGATGTCAATCTCCCAATAAGAAGAAACCACTGCCAATGCTAATTCCTTTGAGTCCTGGGAGTAAACCAGCGAATGCTAATAATCCTACAACACCCAGCACTTCTCCAACGACAGTGCTCAATGTGCCTCGTGTCAGGGTGAGGCCTGAGCTTGCTAAAATCGCTCGAGACACTGAAATAGctaaattatataataattgcGAGGATATTAAGAAAGAAGCGAGTCCACCAAGCTCCTTTGAACGAAGAAACGCAACATTCTTCGATAAACTGAAGGAACGCCTGATGACAACGACCGGAAGTACAGGCGTCAATAATCAGGTAGCAGTAAGTACTGTGAACGATCTAAAGTGTTGGTGCACGTTTGAAGCAAGTAGCCCagatgaattatcaattcacaaaaaaaccCATCACACTGCGCTCAGTGTATCTATTGGTGTTTCGCGATGTCCAAAGTGTCGGAGACGTTGTAAAACTTCTAGTGATCTACAAATGCACGTGAAAATATGTCCAGCgtataatgataataagagTAGTCAGGAGAAGATCAACCGTGATAACAATGTCACAACTTCCAATGATTTTGAGTTACCATTGCAAGTGGATTGGGATGGGAGTCACAATGGATTTGTTTCCTCTGGATCCTCGatGGACGGAGTATCGCAGAATTCCAGTACTCGACGTGTATTCAAGTGTCCTCATTGTCCATTTTGGGCATCAACTGCCAGCAGATTTCACGTGCACATCGTTGGACATTTGAATCGGAAGCCCTTCGAGTGTTCATTGTGTGCTTACAGATCGAATTGGCGATGGGACATAACTAAACACATTAAATTGAAAGCAGCGAGAGATGCAGCGCATTTAAATGCCCGAGTGCTCATGACCGATGAGACTGGACGTCGTAATTATTCAAAGTACAATAAATATCTGACGCAGATGGAGAGTCAAGCTACAGAGGACACCAGCATGGATGAGAATCAGGGTTCATTACGTACTGGAGAACCTCCACGAAAGGTCCTCATTATGACCGATGGTAAAATATACTCCGAAGTCCAGAATTCTCTTTCCATAGACGTGAACTCCGGAAAAGCATCAAATACCAGTGGACCAAGAACCCCGGGGCAATCATTGTTGAAAGTGAATCCTTCCACAAGTTCCCCGAATCCCCcgaattcttcaacaatttcccCGGAGTCTACACCATCCGAAGAAACCAAACGTACAATGTGGAAATGTAAACGATGTAATTACCGTGATTCAAGCAAGGAGATACTCTTGCTCCACGTGAAGAGTCATTACGAGAATGCAGAAAAATCTTCAAAGAACTCAAATAAACTAACATGCAAGGATTGCCCCTTTGTGGCTAATGATTCCGAGTCATTAGCGATTCACAAAGTCCATCATCGTCCGAATCTTGAAGCCATCTTCAAGTGCTACCTCTGCCCCTACTACGTGAGCACGAAAACTGAGCTTCTGGAACATGCACGATTGCACGGTGAAGAATTAGCAGTAGTGCACCAATCTGAGGCTTCAGGAAAGACCAAATCTCCACCGAATCCCCAGGAAACCGAAGGATCCGAGAAGACAAGTGACGTAACACCTCTCTCATCAATCTTCAACGCTGAACGTCCCGAAGGACAAGCACCTCCATTACTCTTAGACACTCGAGCATTACCCGATACTCCGATGGTCTGGGTCTCCAAGCCAGATGGGACCTTCGCAAAAATGCTAAAGTGTCGTCACTGCCCCTTCGTATCATCAAGAAGAGCAGAAGTTAAAGACCACGAGATTATGCATATGAATACAAATGAAAATGCTAATTCCATTTCCTGTCCAGACTGCAGTTTCATGTGCAGTCAACGTGAAGTCATGGAGGCACATGCAAATATGCATCTGGGATCATTGGGCACGGTTCATTGTTTAGTAGCTGATAATAGGAGCGATGCACAGCAGTTGGATGACCTCAAGAGTATTCTAGGACTAACGAAAACCCCGGAACTCGGGGCAGAACCGGATCTAAGAGACTCCAGACTAGTCCACAGTTGTAACAAATGTCCAGCTCGATTTTTGTGTGAGAAAGAACTGAGAATTCACCTTCGTTATCATTCTACAGCACTTGCTTATGATTGTAAATGGTGCTCCTACGCTGCTAGACAATGTGCACATCTTTCAGCTCATCAGAAAGCTCATTCTACGGAGTATCAAGAACGTACACGTTACCTCTCTTCAGTCTACGGGAATTCCCAAAGATTCCCACCACCTTTAACCGCTTGtatcgaagaaaaaaaccaGGATAATGGTGATGAGAATCAACGTGCTTGGATCGTCGTGGAGATAGCGAATCGTGAACAGAATCAGAACGGAGAGCAACAAGAAAACCAAGTCTTCACTTGCGTCAAATGTCCAGCGAGATACTTCAAACTCGATGCCCTCGAGTACCACATGACTCTCCATGGATCCAACAACAGATTCAAATGCGAGGAATGCGATTACTCCTCAAAAACAGcacaaaatttaatgaaacatcaGGTGGTTCATAGAAGATACAACGAAACCACTGAGCAACTCATCTCCAGGCTTCCATCCTCAAATTCAGAGGTCATCACAGTTATAAATGGATCCGAAGACTCTAACTTTACGTATTCAGAGTATCCGAGGAATGAAAGTATTAAAGAGAAGAAACACAAGTGCCATAAATGCCCTTCTACCTTTGACAAACGTGAACAGTACCGCATACATCTAGCTCTTCATGGATCCAAACAGAAGTACAGGTGTAATCAGTGTGATTATGCTGTTAAATGTTATGAGACTTGTGTGCAGCATTTGAAGGAGCATATTGTTAATGGAGATGCTGAATTGTCTCCGAGGAAGTCGGATGATGAGGTTTATGAAGTGGAGAAGTCAGAGCCGAAGACTCGGAGGAAATCAACGATTTCTTCTGGTAATCTGCTTTTGGGCGATGCAATGTCAGTGTCCAATCAGGACAGGCAGACGGTTCTGTTGATGCAGAAGAAAGCTTCATTGACGAACGACATTAATGATCATGAATTCAGGTGCACAGAGTGTCCTTTCTCAACTGCTGATCAAACTGCTCTCGATAGTCACAAGAGGAGACATGGGATTGATAGACTCACTCCACCTTGTCCACATTGTAATTATGTACCTAGGAAAGATGAGAATGTTGGGGAACATGTTAAGCTTCATTTTACGAGAATGTATAAACCTGATGGTTACCTGATTATTGAAATGCTGGAgttgaaaatggagaaactcGATGGGGGTAAAAGtgagaagaataaagagaatttactTTTTCGCGAGTGTTCGGATGGAAAATTCTTGCCTGTGTCTGATTTAAGTACTTTGCCATTGAGcaataaaaggggaaaaagtggaaaagaaaaaattatcatcgatCCAAACACCGGAGAGGCTACACCTCGTGTAAAAGAGTAG
- Protein Sequence
- MSERSPRLRALRPRHSIIPRSTEKSSGDSEAEGNASQENESELENADDTRDDSDSEPRLVIKEEPEDNVDERIEENRKYVCNSCKPSLEFSSLIEYLQHLKARHQQKTKSHQCSYCSYSYQNPKKLQRHIITAHKDVQGEKSGEIVRRNKCTMCNFVAYTPTDMENHQRLHHLKRRFFRCTKCSYMTHVRARYTKHVKYHSMPMIKCDDCDFRTPYKWNLDRHTRNHGGGGAFQCHACSFTAEIRQSLTVHETNHHEPPIGPFPKKMSPFERKPRNGPKRYNQVGASDYRDVQPLDKPSQNPQNPENPREEEEGKNAIDGADCIALKCEEKGCQFITAWDSEMQRHVAESHGGCQSPNKKKPLPMLIPLSPGSKPANANNPTTPSTSPTTVLNVPRVRVRPELAKIARDTEIAKLYNNCEDIKKEASPPSSFERRNATFFDKLKERLMTTTGSTGVNNQVAVSTVNDLKCWCTFEASSPDELSIHKKTHHTALSVSIGVSRCPKCRRRCKTSSDLQMHVKICPAYNDNKSSQEKINRDNNVTTSNDFELPLQVDWDGSHNGFVSSGSSMDGVSQNSSTRRVFKCPHCPFWASTASRFHVHIVGHLNRKPFECSLCAYRSNWRWDITKHIKLKAARDAAHLNARVLMTDETGRRNYSKYNKYLTQMESQATEDTSMDENQGSLRTGEPPRKVLIMTDGKIYSEVQNSLSIDVNSGKASNTSGPRTPGQSLLKVNPSTSSPNPPNSSTISPESTPSEETKRTMWKCKRCNYRDSSKEILLLHVKSHYENAEKSSKNSNKLTCKDCPFVANDSESLAIHKVHHRPNLEAIFKCYLCPYYVSTKTELLEHARLHGEELAVVHQSEASGKTKSPPNPQETEGSEKTSDVTPLSSIFNAERPEGQAPPLLLDTRALPDTPMVWVSKPDGTFAKMLKCRHCPFVSSRRAEVKDHEIMHMNTNENANSISCPDCSFMCSQREVMEAHANMHLGSLGTVHCLVADNRSDAQQLDDLKSILGLTKTPELGAEPDLRDSRLVHSCNKCPARFLCEKELRIHLRYHSTALAYDCKWCSYAARQCAHLSAHQKAHSTEYQERTRYLSSVYGNSQRFPPPLTACIEEKNQDNGDENQRAWIVVEIANREQNQNGEQQENQVFTCVKCPARYFKLDALEYHMTLHGSNNRFKCEECDYSSKTAQNLMKHQVVHRRYNETTEQLISRLPSSNSEVITVINGSEDSNFTYSEYPRNESIKEKKHKCHKCPSTFDKREQYRIHLALHGSKQKYRCNQCDYAVKCYETCVQHLKEHIVNGDAELSPRKSDDEVYEVEKSEPKTRRKSTISSGNLLLGDAMSVSNQDRQTVLLMQKKASLTNDINDHEFRCTECPFSTADQTALDSHKRRHGIDRLTPPCPHCNYVPRKDENVGEHVKLHFTRMYKPDGYLIIEMLELKMEKLDGGKSEKNKENLLFRECSDGKFLPVSDLSTLPLSNKRGKSGKEKIIIDPNTGEATPRVKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -