Ates008913.1
Basic Information
- Insect
- Aleiodes testaceus
- Gene Symbol
- -
- Assembly
- GCA_963565655.1
- Location
- OY751419.1:3879423-3890159[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.036 3 8.6 0.5 1 21 137 157 137 158 0.94 2 20 0.00071 0.059 14.0 0.7 2 23 165 187 164 187 0.96 3 20 0.33 27 5.6 6.1 2 23 198 220 197 220 0.90 4 20 6.7 5.6e+02 1.5 0.3 5 20 480 495 479 496 0.91 5 20 0.28 24 5.8 1.7 2 23 506 527 505 527 0.95 6 20 6 5e+02 1.6 1.6 3 19 556 572 555 574 0.91 7 20 0.12 9.8 7.0 0.8 2 23 690 712 689 712 0.96 8 20 0.015 1.3 9.8 2.6 2 23 722 744 721 744 0.93 9 20 0.018 1.5 9.5 0.2 2 20 765 783 764 785 0.93 10 20 0.013 1.1 10.0 2.4 1 23 792 815 792 815 0.97 11 20 3.3 2.8e+02 2.4 8.8 1 23 826 849 826 850 0.93 12 20 0.0012 0.1 13.2 0.1 1 23 867 889 867 889 0.98 13 20 0.29 25 5.7 2.4 1 23 895 918 895 918 0.94 14 20 0.72 60 4.5 0.3 2 23 928 950 928 950 0.95 15 20 0.00023 0.02 15.5 0.2 1 23 1015 1037 1015 1037 0.97 16 20 0.1 8.7 7.2 0.8 2 20 1155 1173 1154 1175 0.92 17 20 0.011 0.94 10.2 0.7 1 23 1182 1204 1182 1204 0.95 18 20 0.65 54 4.6 0.8 2 21 1215 1234 1214 1237 0.83 19 20 0.94 79 4.1 1.4 3 23 1339 1360 1337 1360 0.93 20 20 0.045 3.8 8.3 0.2 2 23 1417 1439 1417 1439 0.96
Sequence Information
- Coding Sequence
- ATGGCTCGTGCCACAGTTTACAAGAGCTCATCGGGCATTGTCCCAGCGGAATCAACAGTCAATGAGGTCGATCCCTTGGACGATGGGATAAAGAACGAGCCAACAAGTCCATCGATGCCCCATCCCATGGAAACCGATACCTCTGAGCTCCTGAGTGAGCTCGAGGGGATAGAGGCCAATGCCTCAAAGCAAAGAGCACCGGATACCCATGAACCGATGGAAATTGCTGCAGAGACATCGAATTCCAGTGTTTCATCACCGAGTAAGCAACAAGGCTCAGATATAATCGAAAACAAAGAATTATCACAAACCCGTAAAAAGCGACGTGTATCAAGTGACGATTTTCTTATCACTGATCCACCATTGGGCAGATTACGTTGTAGATCCTCATTATCAGGAccgattattttcaaatgcGACGTTTGTTTATTAACATTTAGAAGAGAAATTGACGTACAAAAGCACAAAAATTATTACGATCGTAAGGTACTTAGATGTACTTTTTGTGGGGAAAATTTTACATCACCGATGCAGATGATGTCTCATAGAAAATCGGCGCATCGTAATGTTGATTGGAAATTTCGTGGGATTAAATGTCACTTGTGTAAATTATCATTCCACAATAAGTCGTCATTGCAGCCGCACATATTTCATTTCCATGGGGATCCTCCGAGACCCATGGTGCGTAGGCGTTCGAGAGCTGCGAAGAGTGAGGCAAGTCAGAGGGAATTACCAGTGGTGGAATCGGCGAGAGATGCGAGAAAAAGGAAGCGTGATCAATTgatagaggaaaaaggggacttgaataattcaccCTCGAACTCTACATCTTTGCCTCAATCTAGTGCTAAGCCTGACGAAGGCACTAGTCCATCGAAGGATAAGAGCCCCAATCGTAGATcacaaaataaagaaaaacctcTCGTTAAAATTCATGCGATACCCCATGAGGTTGAGGCGTTATTAAGTGACTATGATGATAGTGCAGTGAAAAGGCGGAAGATCGATGATTCAGGTGACATTAGTATTGAGAATGTGAGAGCCCCAAGACTTCGATCCGGTAGACTACGTGATGAAATAAACCCCGAGGGAGCAATAGACCATGAGATTAACGACGAAGTCCCTAAAAACGATGCAAAGGAGACGCCACCAGTGAAGAAGACCGTCGATTCACCGTTCAAACCATCCAGCATATTACACACCCCAGGAAGACTAGTTACACGAAAGTGGGCTATGCTGAAGACGCGATACAAGTGCCGAGAGTGTTTCGTATCGctggagaaaattgataatcggcgtgaagaagaagaagctcTTGATGATTCATCGATTGGAGTACAACTGAAGAACTTGGAGATAGCGTTGAAGAAACTGGACGTTCCTGAAAATTCCCAGGATGCCATTTCCAAAGGAAGGAGAGAGATCTACAGATCGAGCCTCTGCCGCACGAGATTCACGAAGAAGCAGAGGCTCATCAACCACTACCTGTGCTTCCACACGAATCTGAATCAGGACGAGTGCGGAGTCTGCCGATTGCGCTGCGGAAATTCGAGGAAACTGAAGAACCACTTGTCTCTTCACTGCATAAAGATTCCAAAATCCAAACAGGATCGTTCGCCGATAGATCCGAAGGGCCCTTGCGAGAAGTACAGGAAGAAGAATTTCTGCGGAGGCTGCAAGAAGAGGTTCTGGCTGCTGAGTTGCTTGCGGAAGCACGAGGAGTTCTGCAGATTCTTGCAGAGAGCGAAAACCCCTCAAGAAGAGGAGCCTGAAGATAGTCAGCCCATTGAAAGCGCCGGTGATGAATCTCTAGAGACTGATACCAATGTGAGTGATAGAATTGAGCCTGCACCAGCACCTCCAATTCCGGATGTTAATGTGAATGTGACTGTCAATGAAACAGAAGTCCACGGAAAATTGACATTTAAACCAGAGCCAAACCGCTCGTGGGAACTGCGATTATCGAGGGGCATCGCGTCTCACCTCTGCGATATTTGCAACGCAAACTTCGGAACAGATATCCAATTCGTAGAGCACCATCACAGATACGTTCCACGTAATCCCACCCGCTGCATGGAGTGCGGCACTCTGTTCCCATCACGACAACTCCAGAAGAACCACTACAAATCAGCGCACACTCTAGAATCATTGAACTTCAAGCTGCACTGCTCAGTTTGTTACCAAGGTTTCGCCTCAAAGAAATATCTGCGCAGTCACATACTGCACATTCATTGGGatcagatgaataaaaatggtaGAGAATGGTTTTCAACTCATGGAAAATACGAAATGAAGTGTAAAGTATGTACATTAGTATTTAATAATCGTAAGGACTTCATTGAACACGCTATGTATTACTACGACGATGAATTCTACAAGTGCAATCTCTGTGAGAAGAGTTTCGTTGGTAGATTCCGTTATCACGCGCACTGGAAGTCAGTGCATTATACTAAAGAAATACGTAAATCTTACACTCACTATTGTGGAGTATGTAACGAGGGATTTATGTACAAGTTTCATTTGCACTCACACTTGTCCCACGTGCATCATCAAGGTGACGATACTATTGAGGCGAGTCTACGAGCAATGACAGCTCCTTTTGTGTGTAGTGCATGTGAGGAGAAATTCCCAACGGCTGTGCTCCTATCAAAACATCAGAATGTTCACTCGAACGATGGCAAATACGAGTGTAACAAGTGCAGCCGTAAGTGCCGTTCAGTATCGATTCTCGCCAATCACTACAAAGCAAGTCACTCGGACAATCCAAACTTCCAAAGTGCCAAATGTCCGATTTGCAGTGAGGGAATGGTGTCAAAAGTATCGTGGATGTCACACATAAAGCACGTGCATGAAAAACCGATGGATAAACCAAACGAGTTGTGTCTGGAGAGAATTTACACTCttgatcaattaattactgCTGGAGACGTTAAAAAATCTGGGGAATCCGTAATTCACGTGGGCTCGACGTCAGCGGCTGATGCACTTGTATACGAGGAGGACGATGCAATGAGTATAAGCGAGGAGCTTTTGAATATTGAATACACGTGCGCAATTTGCGACGAAAAGTTCGTGTCAATGGAGGAGCTGAAGAATCACAAGAGTATCCATGAGCCAAGTAATTATGGCTGTGAGGATATTGGGGTGAATGTGCAGCAGGATGAACGCTCGAGGGACAGTGTAATCGTATGTGAAGCTAATCAATTGCCCAATCTCCAGCCGTACAAAAGGGTCCCTCTGGTCAATGGAGTCGAGAGCCAGTCAATATCACTGGTTGCACCGCAGCAGAATCCTGAGAATTGTAGTTATAATCTTAACAAAGAAATGCCCTGCAACTTCTCAATATCGAGTATCTACTCAGTGGGATTAGAGGAGTACGAGAAATTAGCTAATGATCAGGCATCCCAGGGGAATGAATCCAGTGCAGGAAAAAGCATCAACGAGGATCCAGAGAATTATCTGCGCTGTGAAATCTGCAACATCGTTTTTACCTGTGCGAAAACCCTGAAAAACCACAAAATAAGATACTCGAATACAGGGGATTACATATGCGAAATTTGCGGCAGGCGATTCAAGTGGATGAGGGCCTATCAAAAGCACGTTACGAAACATCGTAAGAAGAAATTCGGTACACCTCTGTGGTACTGCGAAACATGTGACGAGGCATTTGCAACGAGAAATTCAAAGCTCATGCACTTTTCCCACATTCACAATGAGTTTGTTGCACCCGATGAAAGTGAAGATAATCCGAGAGCTTCACTCGATAACACACGTGATTTATCTGCCGATGCGAATGTAACATCCTCGTCGTTGGATAAATCAAGTGAGAAAGAGGTTTACATTGAGGAAGTTGACTTGACAGAGGACGAATCACAGGAACCAGCTAATTCACAATGCGTGAAGACAACGCCAGCTAATAGTGTTGCTGTTAAACCAACAATTATACAACAGAATCGAGTACAATTGAGTAATTATCATCCAATGGATGGTGTGCCAAATTTGTGTCCTATTTTTTGCAACATCTGTCATATTCGGTGTAtgagcatcgaatttttggTGAAACATATTGAGAATGCTCATGGTATACGATTGCCTGGGTACAAGGAAAATTGTCAAGTTGAATCGAGTGTTAACTCGACGTACGAGCAACAAAATATAACGCAATCGAGTTATCAAAGTCATCAGGATGTGATGAGAAATGTCGGTCATAAAATTGACAGAATTGAAACGCAATCGTCCCCGTCGAATTATTGCAAAACTTGTAGAGCACTATTTCCTAATGAATATGCATTGCTTTCACATTTACGTAGTGCTCATGGTAACAGTGAAACTGGGAATAAAACTAATTTGGATAACGGAAATGCAACGAGATCCAGTGCGCAGACGATTGAAAAAGGACAAATTGATGGGACAAGTAGGGAAAcatcttttctcaattctgaaaaacaaaattcagtTAAAGATTCTTTGAGAAATGAGAGAGCTATGGATTtaacgaaaagaaaagaacatattgttttgaagaaatttcatttgactGGTGATCAAAAAAATGCGTATCGTATTATTGGAAGTAAAGATACACATGCACAAGTGCAGCAACAGAGGCTCTGCATTTTAACTGCACCAGTAGTAGGTGCCTCAGGCGAGCGTTATGGGCTTGTAGCAAGTGCGCTAATTAGTTCGCGAACGATTCGCGAAATGACCACGACCAAACGATCCCTATGGACGTCAACGCTGGAGTCACGTAAACCGCAGGCACAACCACAGTGTGCGTTGTAG
- Protein Sequence
- MARATVYKSSSGIVPAESTVNEVDPLDDGIKNEPTSPSMPHPMETDTSELLSELEGIEANASKQRAPDTHEPMEIAAETSNSSVSSPSKQQGSDIIENKELSQTRKKRRVSSDDFLITDPPLGRLRCRSSLSGPIIFKCDVCLLTFRREIDVQKHKNYYDRKVLRCTFCGENFTSPMQMMSHRKSAHRNVDWKFRGIKCHLCKLSFHNKSSLQPHIFHFHGDPPRPMVRRRSRAAKSEASQRELPVVESARDARKRKRDQLIEEKGDLNNSPSNSTSLPQSSAKPDEGTSPSKDKSPNRRSQNKEKPLVKIHAIPHEVEALLSDYDDSAVKRRKIDDSGDISIENVRAPRLRSGRLRDEINPEGAIDHEINDEVPKNDAKETPPVKKTVDSPFKPSSILHTPGRLVTRKWAMLKTRYKCRECFVSLEKIDNRREEEEALDDSSIGVQLKNLEIALKKLDVPENSQDAISKGRREIYRSSLCRTRFTKKQRLINHYLCFHTNLNQDECGVCRLRCGNSRKLKNHLSLHCIKIPKSKQDRSPIDPKGPCEKYRKKNFCGGCKKRFWLLSCLRKHEEFCRFLQRAKTPQEEEPEDSQPIESAGDESLETDTNVSDRIEPAPAPPIPDVNVNVTVNETEVHGKLTFKPEPNRSWELRLSRGIASHLCDICNANFGTDIQFVEHHHRYVPRNPTRCMECGTLFPSRQLQKNHYKSAHTLESLNFKLHCSVCYQGFASKKYLRSHILHIHWDQMNKNGREWFSTHGKYEMKCKVCTLVFNNRKDFIEHAMYYYDDEFYKCNLCEKSFVGRFRYHAHWKSVHYTKEIRKSYTHYCGVCNEGFMYKFHLHSHLSHVHHQGDDTIEASLRAMTAPFVCSACEEKFPTAVLLSKHQNVHSNDGKYECNKCSRKCRSVSILANHYKASHSDNPNFQSAKCPICSEGMVSKVSWMSHIKHVHEKPMDKPNELCLERIYTLDQLITAGDVKKSGESVIHVGSTSAADALVYEEDDAMSISEELLNIEYTCAICDEKFVSMEELKNHKSIHEPSNYGCEDIGVNVQQDERSRDSVIVCEANQLPNLQPYKRVPLVNGVESQSISLVAPQQNPENCSYNLNKEMPCNFSISSIYSVGLEEYEKLANDQASQGNESSAGKSINEDPENYLRCEICNIVFTCAKTLKNHKIRYSNTGDYICEICGRRFKWMRAYQKHVTKHRKKKFGTPLWYCETCDEAFATRNSKLMHFSHIHNEFVAPDESEDNPRASLDNTRDLSADANVTSSSLDKSSEKEVYIEEVDLTEDESQEPANSQCVKTTPANSVAVKPTIIQQNRVQLSNYHPMDGVPNLCPIFCNICHIRCMSIEFLVKHIENAHGIRLPGYKENCQVESSVNSTYEQQNITQSSYQSHQDVMRNVGHKIDRIETQSSPSNYCKTCRALFPNEYALLSHLRSAHGNSETGNKTNLDNGNATRSSAQTIEKGQIDGTSRETSFLNSEKQNSVKDSLRNERAMDLTKRKEHIVLKKFHLTGDQKNAYRIIGSKDTHAQVQQQRLCILTAPVVGASGERYGLVASALISSRTIREMTTTKRSLWTSTLESRKPQAQPQCAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -