Basic Information

Insect: Aleiodes testaceus
Gene Symbol: -
Assembly: GCA_963565655.1
Location: OY751415.1:3591607-3593468[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.9 1.6e+02 3.2 0.3 2 13 4 15 3 18 0.83

2 9 4.8 4e+02 1.9 3.1 1 10 113 122 113 131 0.87

3 9 2.3e-05 0.0019 18.6 4.0 1 23 141 163 141 163 0.99

4 9 2.1e-07 1.8e-05 25.1 1.0 1 23 169 191 169 191 0.99

5 9 9.9e-06 0.00083 19.8 0.7 1 23 197 220 197 220 0.95

6 9 2.1e-06 0.00018 21.9 4.9 1 23 226 248 226 248 0.97

7 9 7.9e-08 6.6e-06 26.4 4.4 1 23 254 276 254 276 0.98

8 9 2.1e-05 0.0017 18.8 1.9 1 23 282 304 282 304 0.98

9 9 3e-06 0.00025 21.4 6.4 1 23 310 332 310 333 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.9	1.6e+02	3.2	0.3	2	13	4	15	3	18	0.83
2	9	4.8	4e+02	1.9	3.1	1	10	113	122	113	131	0.87
3	9	2.3e-05	0.0019	18.6	4.0	1	23	141	163	141	163	0.99
4	9	2.1e-07	1.8e-05	25.1	1.0	1	23	169	191	169	191	0.99
5	9	9.9e-06	0.00083	19.8	0.7	1	23	197	220	197	220	0.95
6	9	2.1e-06	0.00018	21.9	4.9	1	23	226	248	226	248	0.97
7	9	7.9e-08	6.6e-06	26.4	4.4	1	23	254	276	254	276	0.98
8	9	2.1e-05	0.0017	18.8	1.9	1	23	282	304	282	304	0.98
9	9	3e-06	0.00025	21.4	6.4	1	23	310	332	310	333	0.95

Sequence Information

Coding Sequence: atgaCCGATGAATGTCCGAATTGTggtgaaaaaacaaattcttcGACGTCTCGTTTGATAAAAGACACTTGTGGCCATGAAAAGTGTCGAATGTGTTTGCTCTACGAGGAGCAGGGCTGCAAGGCATGTACCCAACTGGAGAAATCATCAGCAGCACCAGaccCCCAATTGGCCGAAGAATCTTCAAAACCACCAGAAGAAGAACCGGAATCATCAAGTTCATCCTCGAAAAACCCTGAGATTAATTCACCACCAAAAGCATCAACTGTGCCATACAAACCAAAGAAATCCCCGGATCGTAGTCATATAATAACGCTCGGAGAATTTCCAGAACGATACAAATGCACTCTCTGctcaaaaatattcctcaataaaaaaggcaAGTGCTACCACGACGGTTGCCTAACTGGTATTAAACCCTATCGCTGCAAAATATGCGAGAGGACATTTGTAAAGAAATCGCACTACGAGTATCACGAGCGTGTTCACAGCGGCTACAAGCCATTCAAGTGTGAATTATGCCCAAAGGCATTTCCCCAGAAGAACAAATTGAACAGGCACATGCAATCACACAGCAAGGAGAAGAAGTATCTGTGCCCCAAGAATTGTGGCAAGAGGTACAATAAAAAAGACGACCTGAAGATACACATGATGCTGCATACTGGCATAATGCCGCATGTTTGTTCAACTTGTGGCAAATGTTTCCGTGTAAGAACTAGTTTAAATCGGCATATGCAGATACACTCGACTGATCGTCCGCACACCTGCAGCGAGTGCAACAAGAGCTTTAAGGACAAATCATTGTTGATTAGACACAGGAGGACTCATGGGAAAGAGCGGCCTTACTCTTGTGCGCATTGCCCAAGAGTATTTCTGTCTAAAAGCGAGTTGAAGAGACACATCTACACACATTCTGACGTTAAACCTTTTTCTTGTGAATTCTGTCAAACAGTTTTCAGGAGAAAGGATAATTTAAACAGGCACATACGTCATCATCATTCAGCCGACTCTCCGGTTGTTGCAGCGAATTCTGAGGCTCGGGAGAAGTCGGAGACGAGGAAGAAACGGGGGGAGAAGGTAAATGAATCGAGGAAGAGGGAGAAGACCAAGAAGAAAACTGGGAATCCTCAGGTTATCCAGGACTCGTGCACGCAGATTAATTCGAGGCTGGACTCGAGGGGAAACATAACTCCTGTGATCAGAGCACCTGGAGAACTCAGTAATGCAGTGCCTGTTATCAATGGTCCCATCAGCATGAAAAGGAGCGATAACGAGCCGAAAAAGCCGACGTTGACATTCACTGAACCGATTCCAATAGCTGAAGCTGCTGTTATTAATCAGCGAATTGAGCAGAAACTTTATCCACATAATTTGGTGTCGAGTGGCACTTGCTACTTCAGTGATAGGTCTAGTCGAGAACCGCATATACCGATTCAAATTTTACCACCGTTGAGGCACAATTCAGCTGTCAGAGCTGTGCCCATTGTTAGCAAGTTCggaggaggaagaagaatgTCGGATTCTAATTTTTCACCACCTAAAAATGGGACTTTGATTGAATTGACGAGCACTGGACCTGCTGATGCTTTGCGCAGTGATGGGGATAGTGAAGACTGCGTTGTTGTGATGGAGAAGATGAATGTAGGAGTTAGGGGCGAGGAAAAGGCTGAGGGAACCAATTGCGTTTCTACTATTAAGAAGAATATGGGGTTTGAGGGGGATAAGGAGGCGGAGGGTGCGGGAAAAACGTGCGAGACACATTGGAGAAGGAGAACTGCAGAAAATTTGAAACCCCATTTAATTTGA
Protein Sequence: MTDECPNCGEKTNSSTSRLIKDTCGHEKCRMCLLYEEQGCKACTQLEKSSAAPDPQLAEESSKPPEEEPESSSSSSKNPEINSPPKASTVPYKPKKSPDRSHIITLGEFPERYKCTLCSKIFLNKKGKCYHDGCLTGIKPYRCKICERTFVKKSHYEYHERVHSGYKPFKCELCPKAFPQKNKLNRHMQSHSKEKKYLCPKNCGKRYNKKDDLKIHMMLHTGIMPHVCSTCGKCFRVRTSLNRHMQIHSTDRPHTCSECNKSFKDKSLLIRHRRTHGKERPYSCAHCPRVFLSKSELKRHIYTHSDVKPFSCEFCQTVFRRKDNLNRHIRHHHSADSPVVAANSEAREKSETRKKRGEKVNESRKREKTKKKTGNPQVIQDSCTQINSRLDSRGNITPVIRAPGELSNAVPVINGPISMKRSDNEPKKPTLTFTEPIPIAEAAVINQRIEQKLYPHNLVSSGTCYFSDRSSREPHIPIQILPPLRHNSAVRAVPIVSKFGGGRRMSDSNFSPPKNGTLIELTSTGPADALRSDGDSEDCVVVMEKMNVGVRGEEKAEGTNCVSTIKKNMGFEGDKEAEGAGKTCETHWRRRTAENLKPHLI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00046458; iTF_00047478;
90% Identity: -
80% Identity: -