Basic Information

Insect: Aleiodes testaceus
Gene Symbol: ham_2
Assembly: GCA_963565655.1
Location: OY751422.1:3649562-3665948[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.2 1e+02 3.8 0.1 2 10 279 287 278 291 0.91

2 9 0.53 45 4.9 0.2 1 23 308 331 308 331 0.93

3 9 1.8e-05 0.0015 19.0 0.1 1 23 337 364 337 364 0.96

4 9 4.9e-06 0.00041 20.8 2.6 1 23 370 392 370 392 0.95

5 9 4.9e-05 0.0041 17.6 5.3 1 23 398 420 398 420 0.99

6 9 0.0024 0.2 12.3 0.5 3 21 429 447 427 448 0.94

7 9 7e-09 5.9e-07 29.7 1.2 1 23 783 805 783 805 0.99

8 9 9.4e-07 7.9e-05 23.0 3.2 1 23 811 834 811 834 0.97

9 9 1e-05 0.00087 19.7 3.4 1 23 840 862 840 862 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.2	1e+02	3.8	0.1	2	10	279	287	278	291	0.91
2	9	0.53	45	4.9	0.2	1	23	308	331	308	331	0.93
3	9	1.8e-05	0.0015	19.0	0.1	1	23	337	364	337	364	0.96
4	9	4.9e-06	0.00041	20.8	2.6	1	23	370	392	370	392	0.95
5	9	4.9e-05	0.0041	17.6	5.3	1	23	398	420	398	420	0.99
6	9	0.0024	0.2	12.3	0.5	3	21	429	447	427	448	0.94
7	9	7e-09	5.9e-07	29.7	1.2	1	23	783	805	783	805	0.99
8	9	9.4e-07	7.9e-05	23.0	3.2	1	23	811	834	811	834	0.97
9	9	1e-05	0.00087	19.7	3.4	1	23	840	862	840	862	0.99

Sequence Information

Coding Sequence: ATGAGTTGCCTAGACTTGAGCAGACGAAGTAACTGCAGAAACAGTGGTAGCAGTGACGAGGGCGAAACTACAATCACTGGGGGAAGCGCCAGTGGCACTGGCGAGACTACGGAAATCGAGGAGTGCGTGAGGTCATCCAGTGGCAACAGCTACTCTTCGATTTATCATCTCAGGGAGAGCACTTCGGCCTTTGATTTCTCGAGGATCATGGAGAGGCAGACACATGAGAGAAGTGAGGACACCAAGTCAACGGATTACTGGGAACGTGAGAGGGAGAGGCAGTGTAATTACATCAGTGATTATcagAACCCAATAAAAGAAGAGCCAAAGGATCCAGAGGACCATAAAGAATCAACAACAGAGTGGCTCTCTCCAGTGCCAGAGGTCGAGGTTGGCAGTACACTGAACGAGGGTCCACATGTACGTGCAAGAAAGGACATACCAAGGGGCGCAAGGTTCGGTCCATTTCTCGGCAAGTGGGCCAGTGAGCCGTACAACCCCAGATACGCATGGGAGGTTCAACATTCAGGATCTGGTGTTAGAGGCTGGCTGGATGCATCCAGAGAAGCCAGTAATTGGCTCAAGTACATCAGAAGCACTGCAACACCTCAAGATGTCAATATGCGCCATGTTCTTCTTGGTGGAGagATAGTCTACGAGGCAGTACGAGACATTTCCATTGGGGAGGAGCTTCTCATGGGTCCACGTGAGCCTCTGCAGCTTCAGGACATTCATGGAGAGAACACAACCGAGGACAGGAGTGATCGCGAAACCGCATCACAGCACAGTGGTACAGCTGACGAGGATCGtgaggaagaggaggagggAGAGATCCGCTGTACAGTGTGCGATAAACCCTTTCAAGAGATTGACGTattggACTTTCATTTAGTATCAACACATCGATACCCTTCAAATCAGCACAGGTGCGATAGCTGCTCTCGAGGATTCGCCTGGAGACCTCTCTTAGTCCGTCATCGAGCAATTGTCCACGGTGATCTCCGGAAATATCCCTGCGAGAACTGTCCCAAGAATCCCGAACAGGTTTTCACAGACGCCTCAAATCTCCAGCGTCACATCCGTACGAATCACGTTGGTGCCAGAAGTCACGCCTGTACAGAGTGCGGTAAAACATTTGCAACGAGCTCTGGATTAAAGCAACACACTCACATACACAGCAGTGTCAAACCATTCAGGTGTGAGGTTTGTTTCAAGGCATATACACAATTCTCAAATCTCTGTCGTCACAAACGCATGCACTCGCTCTGTCGTATGCAGATAAACTGCGCCAAATGTGGACAATCATTTAGTACTGGTACTTCATTATCAAAGCACAAGCGTTTCTGTTATTCAACAACATCGAATCGCTGTGGCAATAATCAGCCACCACCTCCGCCGCCACCTTCATCAGGTGTAATGTCACAATTGCCATCATCAGGACCAGATCCATTTCTGGTTTATCCAAGACCACCAGTTTCTCTTCCTGGTGGTCTACCTTTTTATCCACCTAGTCTAATGGCTCCATATCCAGGGCTATTTCCGAATACCCACAATTTCCTGAATACTCCGCTGCTCttcccaaaaattcaagaagagCTGAAGCGCAGTGAGAGTCCGAGAAAGGAGCGATTCACACCGCCAAAGATTCACCAAATCAACAAAGTCTCGCCTTCAACTGGAGAAGAAGCAACATCAACGTTCAGACCGTCCCCGGCCCGACCTAGTGTTCAACCGACTCCAGAAAGCGATGATGACTCAAAGAAATCCGAGCTCAAAGTGACTAAAATGGATACAGACTCACCATCATCTGCATCAACAGATCAACCGCTGGATCTCCGGGTTCAAACGAAGAAGGACGAGACTCCAATAAAAGAATCCCCAAGTCGTTCACCATCTCCATCACCTGTACCACCTCCCCACAGTCCAGAGCCTCAGAAGCATCATttagaagaggaagagaagaagCCAGAACCAAGAGATCTATCTCCTCCATCTCTCCCTCAAGAACCTCTCCCCAATACTCCACCGCACATGGCCTATCCAAGACCCATCCATCCCATGTTCATTGAAGCTATGTATCGTAATCCAGGTGCAACTTTTCCGGGTTTTCCCGGAGCCCCAGCACCTCCTGGAGGTCCTCCCGATTCTCGTCTCCTCCCACCACTTCCTCCATTTGGACCCACCAGGGGCCTGCCTTTTTTAGGCAGCCTCATGAATGGCATCAGTGGAGCAAGACCCGGTGGCTTTGACCTCCTTGGAAGACCTCCCATGAGTTTCCCAGGGGTAAAACCCTTCCAGGACGCTGTCATGAGCCACCACCTGCCCCTCGGCAAGATCAAGGATCGATACTCCTGCAAATTCTGCGGCAAGGTCTTTCCGAGATCGGCGAATCTGACAAGACACTTGAGGACACACACGGGCGAGCAGCCGTACAAGTGCAAACACTGTGAGAGGTCCTTCAGCATCTCCAGCAATCTTCAGCGCCATGTTCGCAATATCCATGACAAGCAGCGGCCGTTCAAGTGTCCTCTTTGTGAGCGATGTTTCGGACAGCAGACGAATCTTGATAGACATCTGAAGAAGCACGAGGCAGATGATGGGAGTGTTGTTGTCTCTGTAGCTGATTCCCCTGGAAGCAGCAATGAGAACGAGAGGGAAGAGACTTATTTTGATGAGATTAGATCGTTTATGGGGAAAGTCACGTACACTGGGGACAGCAGCTATGGACTGCCACATCCTGCTTATCCTAGCAGACTTCATGATAACAAGAATGAGGCTGAGTACGATGATGATGAGTACAGCGAGGAGAGGGTTTCTCCAATGGACGATGGAGATGTCATGTCACCAGTTAGGAAGGACTCGTTGAGCCAGCAGTACGAATTAACGTGCAGGGATAAACAGGAACttcttaataataatacaacTGATCCTGTAATCGAGATCTCCACATAG
Protein Sequence: MSCLDLSRRSNCRNSGSSDEGETTITGGSASGTGETTEIEECVRSSSGNSYSSIYHLRESTSAFDFSRIMERQTHERSEDTKSTDYWERERERQCNYISDYQNPIKEEPKDPEDHKESTTEWLSPVPEVEVGSTLNEGPHVRARKDIPRGARFGPFLGKWASEPYNPRYAWEVQHSGSGVRGWLDASREASNWLKYIRSTATPQDVNMRHVLLGGEIVYEAVRDISIGEELLMGPREPLQLQDIHGENTTEDRSDRETASQHSGTADEDREEEEEGEIRCTVCDKPFQEIDVLDFHLVSTHRYPSNQHRCDSCSRGFAWRPLLVRHRAIVHGDLRKYPCENCPKNPEQVFTDASNLQRHIRTNHVGARSHACTECGKTFATSSGLKQHTHIHSSVKPFRCEVCFKAYTQFSNLCRHKRMHSLCRMQINCAKCGQSFSTGTSLSKHKRFCYSTTSNRCGNNQPPPPPPPSSGVMSQLPSSGPDPFLVYPRPPVSLPGGLPFYPPSLMAPYPGLFPNTHNFLNTPLLFPKIQEELKRSESPRKERFTPPKIHQINKVSPSTGEEATSTFRPSPARPSVQPTPESDDDSKKSELKVTKMDTDSPSSASTDQPLDLRVQTKKDETPIKESPSRSPSPSPVPPPHSPEPQKHHLEEEEKKPEPRDLSPPSLPQEPLPNTPPHMAYPRPIHPMFIEAMYRNPGATFPGFPGAPAPPGGPPDSRLLPPLPPFGPTRGLPFLGSLMNGISGARPGGFDLLGRPPMSFPGVKPFQDAVMSHHLPLGKIKDRYSCKFCGKVFPRSANLTRHLRTHTGEQPYKCKHCERSFSISSNLQRHVRNIHDKQRPFKCPLCERCFGQQTNLDRHLKKHEADDGSVVVSVADSPGSSNENEREETYFDEIRSFMGKVTYTGDSSYGLPHPAYPSRLHDNKNEAEYDDDEYSEERVSPMDDGDVMSPVRKDSLSQQYELTCRDKQELLNNNTTDPVIEIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00046447; iTF_00047467;
90% Identity: iTF_00046447;
80% Identity: -