Ates010572.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aleiodes testaceus
Gene Symbol
-
Assembly
GCA_963565655.1
Location
OY751421.1:2890329-2894500[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 9.5 8e+02 1.0 0.1 3 16 228 241 227 243 0.87
2 14 0.00038 0.032 14.8 0.7 2 23 410 432 410 432 0.93
3 14 7.9e-05 0.0066 17.0 0.2 1 23 439 461 439 461 0.98
4 14 1.1e-05 0.00092 19.7 2.7 1 23 467 489 467 489 0.96
5 14 9.9e-05 0.0083 16.6 2.5 1 23 498 520 498 520 0.97
6 14 2.9e-06 0.00025 21.5 0.9 1 23 526 548 526 548 0.98
7 14 9.4e-06 0.00078 19.9 2.1 1 23 553 575 553 575 0.98
8 14 0.0015 0.13 12.9 4.1 1 23 582 604 582 604 0.98
9 14 3.2e-05 0.0027 18.2 1.5 2 23 624 645 623 645 0.98
10 14 0.00013 0.011 16.3 1.3 2 23 653 675 652 675 0.96
11 14 0.19 15 6.4 0.2 2 23 681 702 680 702 0.96
12 14 1.5e-06 0.00012 22.4 5.4 1 23 735 757 735 757 0.99
13 14 0.00073 0.061 13.9 0.1 1 23 762 784 762 784 0.97
14 14 0.0026 0.22 12.2 1.4 1 23 790 813 790 813 0.94

Sequence Information

Coding Sequence
ATGAAAGTGGTTTGTGCTGCGCCCACGTGCAAGTACTCATCTGAACAAGAAGACTCGAATAATATCATTTTCGTTAGTTTCCCAAATGATGATACcGCAACAGTATGGGCCCATCACTGCGGTCGACCAGACTTGATGATGAAATCGAACGAGGAATTACATTTGAATTACTATATTTGCTCTGATCACATCGAGGAGAGGCATTTTTTGAGTAAAAcaaatcaaataataataacccaGGGTGCAATACCAACATTATTTGGTCTCCAAATGCATACGTCAATgataaatgatgaattgaagTCGCCTTACTCATCAACTGACGTTATGAATTCATTAGCATTGAGCGATTGTCAATCAAACTACGTAGATGCAAATAATGAATATCAAAACTCGATTTATACAGCTCATTTAATGAACGCCAATAACGGAATTAACATTAACAGAAGTCACGAAAGTCCAgtaaataatcatttgaattttgataatattgaCGTCCCCATCGGGCAGTTTGACGATGTCACAATGAGATTTGCAAATTTATGCCGAGTTTGTGGTAAAAACATGAGTAATGGAATTGATATATTCGATGATATGAACGATGAAATAACgattcaccaaaaaattcaaattcatctaCCAATTGTCGTTGAAAATGGCGATGCAATGCCAAGGAAAATATGTGGCGATTGccatgaaaaattagaaactTCCCACAAACTCGTGATGATTAGTCTGGAGAATGATATGAGACtgagaaaaatcttcaatttaccCAGCAAGtaTAATAACGGAGATAAATTCCAATCACTTATAGAAAAACAGGAGTTATTACTGGCAGAAGAAGAGCTCCTCGATGGTATTGCTACAACATCAAACATCCCAATCGTTTCGGATAAACTCGAGCTGAATGATAAAGATTCACGTTTGAAATATATGCTTCATCCTGatctgaataatttgattCTGCAGCCACTGCAGTTATCGAATGATGAGAGAATAAAGACTGATTTACCAAATCCACAAGTTGTTCCAGAAATGAAACCAGATGATAGCAGAAGTCACCAAGCAAACAGCCTGAAAGTGGCTAATCAATTAGGGCAATGTGATGATCAGATATTGAATACAAGTAAGAATACCACTGGAATTGGGTGCAtagtattaaataataagCAAGACAATTCGTATCAGAATCCAGTGAAATCAAAGCCACGCGAATTAAACCGACGATGCGGCCACTGCTCCCTATCATTCCCAAATCGTAAACAATTGCAAATTCACATTGCCGAGGATCATAATGGAAAGGGAACGTTATTCAGATGTGGAATATGCGACAAAACTTATCAGAAATGGTCGAGTTTGGACGTCCACGAGGCAACTCACAGAGCTGACACACCATATCTCTGTGACTTGTGCGGTAAAAGTTTCAAGCACTCAAATAATCTCAGGGGACACAAGAAAGTTCACTTGGATATAACGAGGAAAAAACGACACGTTTGTGAAATTTGTGGTGATGCATTCCGATCGAGATTCCATCTACGCGAACATATGAACCAGCACGATGGGAACAAACCTTACGTATGTGAACAATGTGGAAAagcattttcaaaaagaataCAATTACGCCAGCATCGCTCATCCCATGGGGCTAATAAATATTCTTGTACAATTTGTGGTATGACATTTAATCGCAGGGGTAACATGAATACCCATTTCAAGAGACACAGCAACGATAATGGAATGTATACATGCAGTGTTTGTGAGTACAGGTGCAAGTCAATGAGCGAACTGAAGACGCACAGGAAAGAACACAGTGAGAATGACATTTTAGAAAGTATAAAACGTAAATCAATAGGTAAACCAATTATGCAGTGTAAAATCTGCAATAAAGTCTTTTCCAAACGGAGAGTACTATTGAATCACGAACGGACGCACGATGGCGAtgacatgaaaattgaatgtaaCAAATGTGGTAAGAAATTAGCGAGTGAGAATTCGTTGAGACATCACATCAAATCGATGCATCCAAATGAGAAACTGTCCTGTGAACTTTGTGATGACAAATTCCCAACAGAAGACTTAcgttttattcatcaaaaaattcatgacgATGCAACGCGACATTGTTGTAAATTATGCAATTCCGAGTACAAATGCTCACGTGATTTGAAAGAGCACATGAAAGAACACAATGTCAGACAATACACGTGCAAATATTGTTGGAAATCATTTTCACGTAAACATTCATTGACTATTCATGAGCGTAAACATAGTGACCACTCATTTGCTTGTTCAATATGTAATATTGTATTCCCGAAGGAAGATGATATGTTGAAACATGAACGAAATCATGAATTCGATCAAGTATTTGAATGTGAAGCATGTGGTGAAAAATTCAgcagaaaatgtgaaatattgaaaCATTTAAATTTTGTACATAAAATTGATCTGAATGTTTCCGAAAACTTGGACCAATACGTTGAACTCACGGAAAAATTTGATAGTTATTCATTGAATGTACCGTGTTGA
Protein Sequence
MKVVCAAPTCKYSSEQEDSNNIIFVSFPNDDTATVWAHHCGRPDLMMKSNEELHLNYYICSDHIEERHFLSKTNQIIITQGAIPTLFGLQMHTSMINDELKSPYSSTDVMNSLALSDCQSNYVDANNEYQNSIYTAHLMNANNGININRSHESPVNNHLNFDNIDVPIGQFDDVTMRFANLCRVCGKNMSNGIDIFDDMNDEITIHQKIQIHLPIVVENGDAMPRKICGDCHEKLETSHKLVMISLENDMRLRKIFNLPSKYNNGDKFQSLIEKQELLLAEEELLDGIATTSNIPIVSDKLELNDKDSRLKYMLHPDLNNLILQPLQLSNDERIKTDLPNPQVVPEMKPDDSRSHQANSLKVANQLGQCDDQILNTSKNTTGIGCIVLNNKQDNSYQNPVKSKPRELNRRCGHCSLSFPNRKQLQIHIAEDHNGKGTLFRCGICDKTYQKWSSLDVHEATHRADTPYLCDLCGKSFKHSNNLRGHKKVHLDITRKKRHVCEICGDAFRSRFHLREHMNQHDGNKPYVCEQCGKAFSKRIQLRQHRSSHGANKYSCTICGMTFNRRGNMNTHFKRHSNDNGMYTCSVCEYRCKSMSELKTHRKEHSENDILESIKRKSIGKPIMQCKICNKVFSKRRVLLNHERTHDGDDMKIECNKCGKKLASENSLRHHIKSMHPNEKLSCELCDDKFPTEDLRFIHQKIHDDATRHCCKLCNSEYKCSRDLKEHMKEHNVRQYTCKYCWKSFSRKHSLTIHERKHSDHSFACSICNIVFPKEDDMLKHERNHEFDQVFECEACGEKFSRKCEILKHLNFVHKIDLNVSENLDQYVELTEKFDSYSLNVPC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00048020;
90% Identity
iTF_00048020;
80% Identity
iTF_00048020;