Basic Information

Gene Symbol
Snapc4
Assembly
GCA_963565655.1
Location
OY751421.1:435522-438026[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.3 2.6e+02 1.9 0.0 22 46 225 251 214 251 0.86
2 6 3.7e-07 0.00032 20.8 0.0 6 44 262 302 257 304 0.87
3 6 7.1e-09 6.3e-06 26.3 0.1 4 44 316 360 315 362 0.96
4 6 3.2e-09 2.9e-06 27.4 0.0 1 38 368 406 368 413 0.90
5 6 4.3e-11 3.8e-08 33.4 0.1 3 41 423 460 422 463 0.85
6 6 2.2 1.9e+03 -0.8 0.7 1 10 756 765 756 766 0.85

Sequence Information

Coding Sequence
ATGAGTGATCTGGAGGAAGACAGTGACATCCTCGAGGACATCAAAGCCCTCGAGGATGTTCTGGCGATGGACAAGACGAGGGAAGCCTCAGACACCGATGataattacgagaaatttccgaaaagacgaaaaatattccaagaaGATGCTCCATTCGTTGGAGGTTATGAAACTccagatgaattaatgagaaaggCCTTTGAGATGAACGAGAAATTAATCTCCAAGTTTCGGGAAGCAAAAGAAGCTGTAACCGCTCGTCTCCATGAGTGTCTGAAGAAGCAGGAAGAGTTGGACTTGAAGATTAAGCTAGTGACAAAAGGTAGTAAGGGAAATTGTCATGTGCGTTATTCAAAGGCTGGTTATCCTTATTTCAAGGATTTCAAGCACTTTCCAGCACCTCTGAATGACGATGCCCTCCTCAAATCAAAAAGAGGTGAACTTATGGTGGTTTATCAACGTCCACCGAGTAGATGGACGATCAAGGACAGAAATGCACTCTGGATGGCTGTCAGAAGACAAGCAGCAACTGAATTCTTCGagggagaaatgaagaaacagAAAAACGCAGGATCTACTGCACATCCTGAGGATGAAGAGATTGATCTTGACAAGTGCCAATTACCGAAGAATTATAAAGAAATGATTGGACCCTTTGGCTCACGAGAATTCGACTGGATGAAAATATCAGCACAAGGATTCAATAATCGACACTCTGCTGATGAATGCAGAGTCATGTGGAATGTTTATCTACATCCTGATATCAATCGTTACAGATTCAATCATCTAGAGAACAAATCACTTACACAATTAGTTCCAGATTATAATTACGAGAATTGGGATGAAATTGCGAAGGCTCTGGGCACTGGGAGAACCGGATATCAGTGTTTTATCCGTTACGCAATGATGATTGGTCCAATTCATCTCCAGAATAAAGACATCCAGTGGAcgattgaagagaataaaattctcataagCGTCGTCGATGATTTACGAATTGGTGATTATATTCCATGGAGCATTGTTGCTTCGTATCTGGATAATAGAACTAAAAGTCAGGTTTATTCGCATTGGAAGTACAATATTGATCCATCGGTTACAAAAGGAAGATTCACGACTACTGAGGATGAATTATTGCTGGACGGTGTGACGAGGTTTGGGAAAGACTTTTCTAGAATTTCTAgtgaattaattcctcatAGAACGAGTGTGCAATTGAATGGAAGATTCACATTGTTGATGTTGAAGACAGATGGAAACTACAGATGTTGGTCAGTGGCTGAAGACATGCAATTGTTGAAACTTCATGATGAGCTTGGACCAAAGTGGAGTCTGATTGCGGAGCTGATGGGGAAAAATAGGACTTATGTGAGACATCGTTATATAGCGGTTGTCAGATTTCTGGCGAAGGGTGGGGAGCTCTCGGACATGTCCAGGAAAGCTTACAATCATCCAGGTCCTAAAGACGAGGATAGAATCCATGATCATGCATTTGTTATTAATAATCATGCAAGGAAGGCTGCATCCAAGATGGACATTGACACGAGACTTCTGGAGTATTTCCAGAACGTGCAGACACCATCAACGAAACCAGGAAAACAGCCCAAGTACAAGGATAAAGCTGAGCTCACGAGACACACCAAACAACTCTACGAATTGTTTGAGAAACTCGATGTGAACCTGGAGATTCCTGATTCCTTGGATATCAAGGGATTAACTTCGAGGGACAAGCAGTTATTGACTTCTTTCAAGGAATACATCGCTGGTAAGAGTATGGTCGATCCAAAGGAGCTCGAGAAAATCAGGATAAGGATGTTTGGGCCGGATAAACCTGAGAATACATTTTACGTTCCACCACCGCCATTTGGACTCTATTTCAAGCCCCTCGGTAAGAAGAAAAACAGGAGAGATAATGAGGAAACTGTGGATGAAGACTGCTCAATTCTTCCGGAACAGGAGTTTAAGACACCGGAGAATGTGGATAAAATGTTGAGTGAAGAGGAGGTAGATCAATTTcgtaaattttctctattcatCACGGAAAAACGTCCTGAATCTCTCGAGTTTGAGAAGAAATTCATTACTGAAGACATAGGATTGGAGGATCCACCTTCAGCCAATGATTTGACGATTATTTCCTGGGGTCGGAAAATTAGTGGGGATGTTAATGGAGATATTGAGAGAGAACAAAGGACTTTTATTGAACCTTGTCATTCAACATTACAGGGATACGATATACTGAGGCGCATGAAAGAGACGAATAGTCGATCAGAGTGGACCGAGGATGAAATTGAGATGAGTAAGAGGCCTGTCACATCAGCTGGTAAAAAGGCATTCCATCTTTTTAAAACGAGATTCACGAGGCTTTTCAAATATCCAATTTGTATGATTAAAAATGCTGAAGCTAAGCTCACTGGGACAAATGTTATTCTCCTACCGAGAGTAGGATGGGATCAATCTAATGGAGCTGCGAATTCTCTGGATGCTGAGGACAGTGATGATTAA
Protein Sequence
MSDLEEDSDILEDIKALEDVLAMDKTREASDTDDNYEKFPKRRKIFQEDAPFVGGYETPDELMRKAFEMNEKLISKFREAKEAVTARLHECLKKQEELDLKIKLVTKGSKGNCHVRYSKAGYPYFKDFKHFPAPLNDDALLKSKRGELMVVYQRPPSRWTIKDRNALWMAVRRQAATEFFEGEMKKQKNAGSTAHPEDEEIDLDKCQLPKNYKEMIGPFGSREFDWMKISAQGFNNRHSADECRVMWNVYLHPDINRYRFNHLENKSLTQLVPDYNYENWDEIAKALGTGRTGYQCFIRYAMMIGPIHLQNKDIQWTIEENKILISVVDDLRIGDYIPWSIVASYLDNRTKSQVYSHWKYNIDPSVTKGRFTTTEDELLLDGVTRFGKDFSRISSELIPHRTSVQLNGRFTLLMLKTDGNYRCWSVAEDMQLLKLHDELGPKWSLIAELMGKNRTYVRHRYIAVVRFLAKGGELSDMSRKAYNHPGPKDEDRIHDHAFVINNHARKAASKMDIDTRLLEYFQNVQTPSTKPGKQPKYKDKAELTRHTKQLYELFEKLDVNLEIPDSLDIKGLTSRDKQLLTSFKEYIAGKSMVDPKELEKIRIRMFGPDKPENTFYVPPPPFGLYFKPLGKKKNRRDNEETVDEDCSILPEQEFKTPENVDKMLSEEEVDQFRKFSLFITEKRPESLEFEKKFITEDIGLEDPPSANDLTIISWGRKISGDVNGDIEREQRTFIEPCHSTLQGYDILRRMKETNSRSEWTEDEIEMSKRPVTSAGKKAFHLFKTRFTRLFKYPICMIKNAEAKLTGTNVILLPRVGWDQSNGAANSLDAEDSDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-